Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1258900 Malus domestica HOM05D007217 ORTHO05D009092 1.3e-70 269.6 137 100.0
Prupe.4G105800 Prunus persica HOM05D007217 ORTHO05D009092 1.0e-54 216.9 135 82.2
MD10G1238500 Malus domestica HOM05D007217 ORTHO05D009092 1.3e-54 216.5 116 92.2
RcHm_v2.0_Chr5g0019241 Rosa chinensis HOM05D007217 ORTHO05D009092 5.9e-39 164.5 138 67.4
FvH4_3g11820 Fragaria vesca HOM05D007217 ORTHO05D009092 5.5e-37 157.9 138 63.8
FAN21G1503 Fragaria x ananassa HOM05D007217 ORTHO05D009092 4.5e-31 138.3 134 59.7
Duzib235G1460 Durio zibethinus HOM05D007217 ORTHO05D009092 1.0e-30 137.1 136 55.9
GSVIVG01019606001 Vitis vinifera HOM05D007217 ORTHO05D009092 1.0e-30 137.1 133 54.9
CiPaw.10G112300 Carya illinoinensis HOM05D007217 ORTHO05D009092 2.2e-30 136.0 119 59.7
TWI09G0397 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 1.1e-29 133.7 126 58.7
Ciclev10018165m.g Citrus clementina HOM05D007217 ORTHO05D009092 1.9e-29 132.9 115 59.1
Ciclev10029535m.g Citrus clementina HOM05D007217 ORTHO05D009092 1.9e-29 132.9 130 54.6
QL05p062902 Quercus lobata HOM05D007217 ORTHO05D009092 2.5e-29 132.5 117 60.7
FAN16G2896 Fragaria x ananassa HOM05D007217 ORTHO05D009092 1.2e-28 130.2 134 58.2
Atru.chr10.619 Acer truncatum HOM05D007217 ORTHO05D009092 1.6e-28 129.8 116 59.5
Cpa.g.sc64.50 Carica papaya HOM05D007217 ORTHO05D009092 1.6e-28 129.8 120 55.8
Thecc.06G135800 Theobroma cacao HOM05D007217 ORTHO05D009092 2.1e-28 129.4 139 51.8
Gohir.A06G140100 Gossypium hirsutum HOM05D007217 ORTHO05D009092 3.6e-28 128.6 139 51.8
TWI09G0788 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 3.6e-28 128.6 126 57.9
Manes.02G204000 Manihot esculenta HOM05D007217 ORTHO05D009092 1.0e-27 127.1 127 51.2
Sabra01G0058500 Salix brachista HOM05D007217 ORTHO05D009092 1.4e-27 126.7 120 54.2
Gorai.010G170900 Gossypium raimondii HOM05D007217 ORTHO05D009092 1.8e-27 126.3 132 51.5
ClCG07G002120 Citrullus lanatus HOM05D007217 ORTHO05D009092 6.7e-27 124.4 129 53.5
Dinv20263 Davidia involucrata HOM05D007217 ORTHO05D009092 6.7e-27 124.4 141 51.1
Gohir.D06G146500 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.5e-26 123.2 132 51.5
MELO3C015565.2 Cucumis melo HOM05D007217 ORTHO05D009092 2.0e-26 122.9 115 56.5
Potri.003G149100 Populus trichocarpa HOM05D007217 ORTHO05D009092 3.3e-26 122.1 116 55.2
Potri.001G081300 Populus trichocarpa HOM05D007217 ORTHO05D009092 5.7e-26 121.3 133 50.4
Eucgr.E04359 Eucalyptus grandis HOM05D007217 ORTHO05D009092 7.4e-26 120.9 135 49.6
Eucgr.E02022 Eucalyptus grandis HOM05D007217 ORTHO05D009092 1.3e-25 120.2 133 48.9
CsaV3_3G030060 Cucumis sativus L. HOM05D007217 ORTHO05D009092 1.7e-25 119.8 130 52.3
THA.LOC104808222 Tarenaya hassleriana HOM05D007217 ORTHO05D009092 2.2e-25 119.4 119 53.8
Lj5g0013157 Lotus japonicus HOM05D007217 ORTHO05D009092 4.8e-25 118.2 133 51.1
Rhsim09G0182200 Rhododendron simsii HOM05D007217 ORTHO05D009092 6.3e-25 117.9 117 53.0
Sed0002565 Sechium edule HOM05D007217 ORTHO05D009092 8.2e-25 117.5 122 52.5
Rhsim02G0191400 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.8e-24 116.3 117 52.1
CsaV3_4G011770 Cucumis sativus L. HOM05D007217 ORTHO05D009092 4.1e-24 115.2 128 50.0
MELO3C022720.2 Cucumis melo HOM05D007217 ORTHO05D009092 9.1e-24 114.0 114 52.6
Lj6g0006317 Lotus japonicus HOM05D007217 ORTHO05D009092 5.9e-23 111.3 106 54.7
Nn7g37971 Nelumbo nucifera HOM05D007217 ORTHO05D009092 1.7e-22 109.8 136 47.8
Dinv01436 Davidia involucrata HOM05D007217 ORTHO05D009092 2.9e-22 109.0 93 60.2
Peaxi162Scf00586g00008 Petunia axillaris HOM05D007217 ORTHO05D009092 2.9e-22 109.0 112 50.0
Medtr8g011490 Medicago truncatula HOM05D007217 ORTHO05D009092 8.5e-22 107.5 106 53.8
Aa31LG4G550 Aethionema arabicum HOM05D002649 ORTHO05D002838 1.9e-21 106.3 120 48.3
Glyma.08G176100 Glycine max HOM05D007217 ORTHO05D009092 1.9e-21 106.3 129 48.1
Glyma.15G250400 Glycine max HOM05D007217 ORTHO05D009092 3.2e-21 105.5 128 46.1
MSTRG.12451 Avicennia marina HOM05D007217 ORTHO05D009092 9.4e-21 104.0 136 48.5
AL2G41250 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 1.2e-20 103.6 124 46.0
AT4G00695 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 1.2e-20 103.6 108 50.9
Rhsim04G0112200 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.2e-20 103.6 148 41.9
PGSC0003DMG400021318 Solanum tuberosum HOM05D007217 ORTHO05D009092 1.2e-20 103.6 137 44.5
Lalb_Chr16g0392431 Lupinus albus HOM05D007217 ORTHO05D009092 2.1e-20 102.8 133 45.9
Gorai.011G051100 Gossypium raimondii HOM05D007217 ORTHO05D009092 3.6e-20 102.1 139 46.0
Psat0s5329g0080 Pisum sativum HOM05D007217 ORTHO05D009092 3.6e-20 102.1 112 46.4
Solyc01g007180.3 Solanum lycopersicum HOM05D007217 ORTHO05D009092 4.7e-20 101.7 115 49.6
EL10Ac9g22805 Beta vulgaris HOM05D007217 ORTHO05D009092 6.1e-20 101.3 96 59.4
DCAR_001337 Daucus carota HOM05D007217 ORTHO05D009092 8.0e-20 100.9 115 48.7
Sopen01g003160 Solanum pennellii HOM05D007217 ORTHO05D009092 8.0e-20 100.9 139 41.7
AT1G80245 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 1.0e-19 100.5 119 45.4
VMungo1383G0797 Vigna mungo HOM05D007217 ORTHO05D009092 2.3e-19 99.4 133 39.1
Carub.0007s3329 Capsella rubella HOM05D007217 ORTHO05D009092 4.0e-19 98.6 104 51.0
Phvul.008G108200 Phaseolus vulgaris HOM05D007217 ORTHO05D009092 4.0e-19 98.6 130 40.8
Gohir.D10G048000 Gossypium hirsutum HOM05D007217 ORTHO05D009092 5.2e-19 98.2 139 46.0
Oeu043290.1 Olea europaea HOM05D007217 ORTHO05D009092 5.2e-19 98.2 113 46.9
Rhsim05G0134700 Rhododendron simsii HOM05D007217 ORTHO05D009092 5.2e-19 98.2 110 48.2
AL7G47090 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 1.2e-18 97.1 120 45.8
Cc01_g06080 Coffea canephora HOM05D007217 ORTHO05D009092 1.5e-18 96.7 105 46.7
BcaB05g25284 Brassica carinata HOM05D004952 ORTHO05D006131 2.0e-18 96.3 112 47.3
C02p37450 Brassica napus HOM05D004952 ORTHO05D006131 2.0e-18 96.3 105 50.5
CARHR074240 Cardamine hirsuta HOM05D007217 ORTHO05D009092 2.0e-18 96.3 122 46.7
SGA_v2.0_scaffold3G01474 Striga asiatica HOM05D007217 ORTHO05D009092 2.0e-18 96.3 111 48.6
TAR722G0002 Trochodendron aralioides HOM05D007217 ORTHO05D009092 2.6e-18 95.9 138 43.5
DCAR_031675 Daucus carota HOM05D007217 ORTHO05D009092 3.4e-18 95.5 90 54.4
BraA02t07362Z Brassica rapa HOM05D004952 ORTHO05D006131 4.4e-18 95.1 127 44.9
Sc06g0009730 Simmondsia chinensis HOM05D007217 ORTHO05D009092 4.4e-18 95.1 134 44.0
BolC2t09757H Brassica oleracea HOM05D004952 ORTHO05D006131 7.5e-18 94.4 128 44.5
Gohir.A10G046700 Gossypium hirsutum HOM05D007217 ORTHO05D009092 9.7e-18 94.0 73 61.6
Sp5g35560 Schrenkiella parvula HOM05D007217 ORTHO05D009092 9.7e-18 94.0 107 45.8
BcaC03g15989 Brassica carinata HOM05D007217 ORTHO05D009092 1.7e-17 93.2 130 43.1
Sp1g21760 Schrenkiella parvula HOM05D007217 ORTHO05D009092 1.7e-17 93.2 101 45.5
arahy.Tifrunner.gnm1.ann1.Z0SJI2 Arachis hypogaea HOM05D007217 ORTHO05D009092 2.8e-17 92.4 103 45.6
arahy.Tifrunner.gnm1.ann1.TIKV1F Arachis hypogaea HOM05D007217 ORTHO05D009092 8.3e-17 90.9 103 46.6
Lsat_1_v5_gn_4_36120 Lactuca sativa HOM05D007217 ORTHO05D009092 8.3e-17 90.9 111 44.1
GSVIVG01013634001 Vitis vinifera HOM05D007217 ORTHO05D009092 3.1e-16 89.0 113 50.4
arahy.Tifrunner.gnm1.ann1.3NP1QY Arachis hypogaea HOM05D007217 ORTHO05D009092 4.1e-16 88.6 127 42.5
Thhalv10019705m.g Eutrema salsugineum HOM05D007217 ORTHO05D009092 4.1e-16 88.6 104 44.2
Migut.N02356 Erythranthe guttata HOM05D007217 ORTHO05D009092 1.6e-15 86.7 110 43.6
MBI18_g37406_MAGBIO Magnolia biondii HOM05D007217 ORTHO05D009092 1.6e-15 86.7 120 40.0
HanXRQChr04g0107331 Helianthus annuus HOM05D007217 ORTHO05D009092 2.7e-15 85.9 148 36.5
SalBow8G5173 Salvia bowleyana HOM05D007217 ORTHO05D009092 2.7e-15 85.9 114 42.1
Psat4g125640 Pisum sativum HOM05D007217 ORTHO05D009092 1.0e-14 84.0 128 37.5
AUR62017567 Chenopodium quinoa HOM05D007217 ORTHO05D009092 1.3e-14 83.6 105 42.9
Lsat_1_v5_gn_7_8820 Lactuca sativa HOM05D007217 ORTHO05D009092 8.5e-14 80.9 113 38.9
A02p23690 Brassica napus HOM05D004952 ORTHO05D006131 1.5e-13 80.1 135 39.3
FAN25G0807 Fragaria x ananassa HOM05D000251 ORTHO05D000414 9.4e-13 77.4 107 49.5
unitig_749.g13716 Utricularia gibba HOM05D007217 ORTHO05D009092 9.4e-13 77.4 111 40.5
COL.COLO4_30930 Corchorus olitorius HOM05D007217 ORTHO05D009092 1.8e-11 73.2 53 64.2
Nitab4.5_0002858g0010 Nicotiana tabacum HOM05D007217 ORTHO05D009092 3.0e-11 72.4 92 44.6
C02p14430 Brassica napus HOM05D007217 ORTHO05D009092 3.4e-10 68.9 67 49.3
BolC2t07567H Brassica oleracea HOM05D007217 ORTHO05D009092 3.4e-10 68.9 67 49.3
Hund24191 Selenicereus undatus HOM05D007217 ORTHO05D009092 4.4e-10 68.6 59 55.9
HPP92_002517 Vanilla planifolia HOM05D007217 ORTHO05D009092 5.7e-10 68.2 70 45.7
HPP92_002534 Vanilla planifolia HOM05D007217 ORTHO05D009092 5.7e-10 68.2 70 45.7
Nitab4.5_0004758g0070 Nicotiana tabacum HOM05D007217 ORTHO05D009092 9.8e-10 67.4 119 36.1
Hma1.2p1_0074F.1_g039010 Hydrangea macrophylla HOM05D007217 ORTHO05D009092 1.4e-08 63.5 114 39.5
ATR0763G267 Amborella trichopoda HOM05D007217 ORTHO05D009092 2.4e-08 62.8 75 42.7
CDE03G0339 Ceratophyllum demersum HOM05D007217 ORTHO05D009092 1.0e-06 57.4 78 35.9
CDE03G0351 Ceratophyllum demersum HOM05D007217 ORTHO05D009092 1.3e-06 57.0 78 35.9


User provided reference genes

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