Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1231300 Malus domestica HOM05D001622 ORTHO05D007320 1.1e-136 490.0 237 100.0
MD10G1202600 Malus domestica HOM05D001622 ORTHO05D007320 3.9e-115 418.3 232 88.4
Prupe.4G139600 Prunus persica HOM05D001622 ORTHO05D007320 3.1e-112 408.7 231 86.1
Thecc.07G152600 Theobroma cacao HOM05D001622 ORTHO05D007320 4.3e-106 388.3 230 82.2
Gorai.002G036400 Gossypium raimondii HOM05D001622 ORTHO05D007320 7.4e-106 387.5 230 81.3
RcHm_v2.0_Chr5g0026521 Rosa chinensis HOM05D001622 ORTHO05D007320 7.4e-106 387.5 233 81.1
FvH4_3g15740 Fragaria vesca HOM05D001622 ORTHO05D007320 1.3e-105 386.7 233 80.7
FAN11G1576 Fragaria x ananassa HOM05D001622 ORTHO05D007320 1.3e-105 386.7 233 80.7
FAN21G2787 Fragaria x ananassa HOM05D001622 ORTHO05D007320 1.3e-105 386.7 233 80.7
GSVIVG01020422001 Vitis vinifera HOM05D001622 ORTHO05D007320 1.3e-105 386.7 228 82.9
FAN16G1111 Fragaria x ananassa HOM05D001622 ORTHO05D007320 2.8e-105 385.6 233 80.3
Haze_08538 Corylus avellana HOM05D001622 ORTHO05D007320 4.8e-105 384.8 228 81.6
Cpa.g.sc10.48 Carica papaya HOM05D001622 ORTHO05D007320 1.1e-104 383.6 228 81.1
CSS0015787 Camellia sinensis var. sinensis HOM05D001622 ORTHO05D007320 3.1e-104 382.1 228 82.5
CSS0023682 Camellia sinensis var. sinensis HOM05D001622 ORTHO05D007320 3.1e-104 382.1 228 82.5
Lj4A318T19 Lonicera japonica HOM05D001622 ORTHO05D007320 4.0e-104 381.7 230 80.4
MD05G1231000 Malus domestica HOM05D001622 ORTHO05D007320 1.2e-103 380.2 197 93.4
Duzib187G0458 Durio zibethinus HOM05D001622 ORTHO05D007320 2.0e-103 379.4 225 82.2
Duzib268G0553 Durio zibethinus HOM05D001622 ORTHO05D007320 2.6e-103 379.0 228 81.1
Manes.06G171900 Manihot esculenta HOM05D001622 ORTHO05D007320 2.6e-103 379.0 230 79.6
Gohir.A11G291600 Gossypium hirsutum HOM05D001622 ORTHO05D007320 1.7e-102 376.3 228 78.9
Actinidia31526 Actinidia chinensis HOM05D001622 ORTHO05D007320 2.2e-102 375.9 228 80.3
CANSAT80G1626 Cannabis sativa HOM05D001622 ORTHO05D007320 2.2e-102 375.9 232 78.4
vmacro11664 Vaccinium macrocarpon HOM05D001622 ORTHO05D007320 1.1e-101 373.6 228 79.4
QL04p073268 Quercus lobata HOM05D001622 ORTHO05D007320 4.2e-101 371.7 230 78.7
Atru.chr2.1758 Acer truncatum HOM05D001622 ORTHO05D007320 5.5e-101 371.3 228 79.8
Potri.011G143000 Populus trichocarpa HOM05D001622 ORTHO05D007320 9.3e-101 370.5 230 79.6
Rhsim06G0238900 Rhododendron simsii HOM05D001622 ORTHO05D007320 2.3e-99 365.9 248 73.8
TAR627G1186 Trochodendron aralioides HOM05D001622 ORTHO05D007320 2.3e-99 365.9 228 77.2
Sabra11G0127900 Salix brachista HOM05D001622 ORTHO05D007320 3.9e-99 365.2 230 77.8
Ciclev10019785m.g Citrus clementina HOM05D001622 ORTHO05D007320 6.7e-99 364.4 228 77.6
Nitab4.5_0001080g0040 Nicotiana tabacum HOM05D001622 ORTHO05D007320 8.7e-99 364.0 230 76.5
Manes.14G016300 Manihot esculenta HOM05D001622 ORTHO05D007320 1.1e-98 363.6 227 76.2
Peaxi162Scf00452g00834 Petunia axillaris HOM05D001622 ORTHO05D007320 1.5e-98 363.2 231 76.6
CiPaw.12G005900 Carya illinoinensis HOM05D001622 ORTHO05D007320 1.9e-98 362.8 222 78.8
Gorai.007G335700 Gossypium raimondii HOM05D001622 ORTHO05D007320 2.5e-98 362.5 235 75.3
TWI38G0191 Tripterygium wilfordii HOM05D001622 ORTHO05D007320 2.5e-98 362.5 233 76.0
MELO3C026966.2 Cucumis melo HOM05D001622 ORTHO05D007320 3.3e-98 362.1 229 75.5
AUR62043219 Chenopodium quinoa HOM05D001622 ORTHO05D007320 4.3e-98 361.7 228 76.3
Solyc07g066450.4 Solanum lycopersicum HOM05D001622 ORTHO05D007320 7.4e-98 360.9 230 76.1
Nitab4.5_0001749g0020 Nicotiana tabacum HOM05D001622 ORTHO05D007320 1.6e-97 359.8 230 75.7
PGR083G0039 Punica granatum HOM05D001622 ORTHO05D007320 1.6e-97 359.8 229 73.4
ClCG11G016450 Citrullus lanatus HOM05D001622 ORTHO05D007320 2.2e-97 359.4 229 74.7
AUR62043840 Chenopodium quinoa HOM05D001622 ORTHO05D007320 3.7e-97 358.6 228 75.4
Cc05_g16070 Coffea canephora HOM05D001622 ORTHO05D007320 4.8e-97 358.2 228 76.3
CsaV3_4G031890 Cucumis sativus L. HOM05D001622 ORTHO05D007320 4.8e-97 358.2 229 74.7
PGSC0003DMG400022235 Solanum tuberosum HOM05D001622 ORTHO05D007320 6.3e-97 357.8 230 75.2
THA.LOC104815713 Tarenaya hassleriana HOM05D001622 ORTHO05D007320 8.2e-97 357.5 228 75.4
CAN.G943.38 Capsicum annuum HOM05D001622 ORTHO05D007320 1.4e-96 356.7 230 75.2
Sed0028189 Sechium edule HOM05D001622 ORTHO05D007320 5.3e-96 354.8 229 74.2
EL10Ac8g20403 Beta vulgaris HOM05D001622 ORTHO05D007320 1.5e-95 353.2 228 74.1
HanXRQChr06g0183061 Helianthus annuus HOM05D001622 ORTHO05D007320 4.5e-95 351.7 228 73.7
Eucgr.F01456 Eucalyptus grandis HOM05D001622 ORTHO05D007320 7.7e-95 350.9 217 76.5
Sc20g0002900 Simmondsia chinensis HOM05D001622 ORTHO05D007320 2.9e-94 349.0 230 73.9
Lsat_1_v5_gn_7_112141 Lactuca sativa HOM05D001622 ORTHO05D007320 1.4e-93 346.7 226 72.6
Aa31LG8G160 Aethionema arabicum HOM05D001622 ORTHO05D007320 3.2e-93 345.5 231 73.6
DCAR_009640 Daucus carota HOM05D001622 ORTHO05D007320 3.2e-93 345.5 230 71.3
Ca_27849_v3 Cicer arietinum L. HOM05D001622 ORTHO05D007320 1.6e-92 343.2 214 77.1
Medtr2g069480 Medicago truncatula HOM05D001622 ORTHO05D007320 6.1e-92 341.3 214 76.6
AL3G24620 Arabidopsis lyrata HOM05D001622 ORTHO05D007320 1.0e-91 340.5 228 73.2
Aqoxy3G00134 Aquilegia oxysepala HOM05D001622 ORTHO05D007320 1.8e-91 339.7 218 73.4
Glyma.08G172100 Glycine max HOM05D001622 ORTHO05D007320 1.8e-91 339.7 214 76.6
CDE05G2624 Ceratophyllum demersum HOM05D001622 ORTHO05D007320 3.0e-91 339.0 217 73.7
Psat1g011120 Pisum sativum HOM05D001622 ORTHO05D007320 6.7e-91 337.8 214 75.7
Phvul.005G057000 Phaseolus vulgaris HOM05D001622 ORTHO05D007320 8.8e-91 337.4 214 76.2
TPR.G9747 Trifolium pratense HOM05D001622 ORTHO05D007320 8.8e-91 337.4 214 76.6
AT3G12940 Arabidopsis thaliana HOM05D001622 ORTHO05D007320 1.1e-90 337.0 228 72.8
Lj3g0000732 Lotus japonicus HOM05D001622 ORTHO05D007320 1.5e-90 336.7 214 75.7
Sp3g11080 Schrenkiella parvula HOM05D001622 ORTHO05D007320 2.5e-90 335.9 228 71.9
VMungo1080G0392 Vigna mungo HOM05D001622 ORTHO05D007320 3.3e-90 335.5 214 75.7
Lalb_Chr03g0031801 Lupinus albus HOM05D001622 ORTHO05D007320 5.7e-90 334.7 224 74.6
CARHR087460 Cardamine hirsuta HOM05D001622 ORTHO05D007320 9.7e-90 334.0 228 70.6
arahy.Tifrunner.gnm1.ann1.5TU0IR Arachis hypogaea HOM05D001622 ORTHO05D007320 1.7e-89 333.2 213 74.2
arahy.Tifrunner.gnm1.ann1.WY48MC Arachis hypogaea HOM05D001622 ORTHO05D007320 1.7e-89 333.2 213 74.2
MSTRG.15021 Avicennia marina HOM05D001622 ORTHO05D007320 4.8e-89 331.6 217 74.2
PSO675G6286 Papaver somniferum HOM05D001622 ORTHO05D007320 4.8e-89 331.6 228 71.5
Carub.0005s0925 Capsella rubella HOM05D001622 ORTHO05D007320 6.3e-89 331.3 228 71.1
Thhalv10022429m.g Eutrema salsugineum HOM05D001622 ORTHO05D007320 6.3e-89 331.3 226 72.6
Oeu052005.1 Olea europaea HOM05D001622 ORTHO05D007320 1.1e-88 330.5 217 72.4
BolC5t34166H Brassica oleracea HOM05D001622 ORTHO05D007320 2.6e-87 325.9 228 69.3
A05p36550 Brassica napus HOM05D001622 ORTHO05D007320 7.7e-87 324.3 228 68.9
BraA05t22455Z Brassica rapa HOM05D001622 ORTHO05D007320 7.7e-87 324.3 228 68.9
Glyma.15G255600 Glycine max HOM05D001622 ORTHO05D007320 2.2e-86 322.8 213 73.2
BcaC05g29222 Brassica carinata HOM05D001622 ORTHO05D007320 3.8e-86 322.0 228 68.9
C05p54970 Brassica napus HOM05D001622 ORTHO05D007320 3.8e-86 322.0 228 68.9
SGA_v2.0_scaffold713G53504 Striga asiatica HOM05D001622 ORTHO05D007320 1.9e-85 319.7 218 70.6
HPP92_001849 Vanilla planifolia HOM05D001622 ORTHO05D007320 3.2e-85 318.9 212 72.2
Migut.H01694 Erythranthe guttata HOM05D001622 ORTHO05D007320 5.1e-83 311.6 216 68.1
CAN.G337.144 Capsicum annuum HOM05D001622 ORTHO05D007320 2.0e-82 309.7 319 53.3
unitig_21.g20253 Utricularia gibba HOM05D001622 ORTHO05D008466 3.7e-81 305.4 207 71.5
MD05G1232200 Malus domestica HOM05D001622 ORTHO05D007320 1.3e-78 297.0 183 82.5
ATR0763G216 Amborella trichopoda HOM05D001622 ORTHO05D007320 4.2e-77 292.0 222 62.6
SHI21454 Sapria himalayana HOM05D001622 ORTHO05D007320 1.2e-76 290.4 224 61.2
BcaB06g25498 Brassica carinata HOM05D001622 ORTHO05D007320 5.2e-75 285.0 228 64.5
Os07g0496900 Oryza sativa ssp. japonica HOM05D001622 ORTHO05D007320 7.4e-74 281.2 218 62.8
Zm00001eb105490 Zea mays HOM05D001622 ORTHO05D007320 2.8e-73 279.3 224 63.8
MD05G1232500 Malus domestica HOM05D001622 ORTHO05D007320 1.5e-69 266.9 248 60.5
Mapoly0052s0101 Marchantia polymorpha HOM05D001622 ORTHO05D007320 6.1e-68 261.5 232 56.5
Pp3c10_7420 Physcomitrium patens HOM05D001622 ORTHO05D007320 8.5e-62 241.1 235 52.3
AagrBONN_evm.TU.Sc2ySwM_369.297 Anthoceros agrestis HOM05D001622 ORTHO05D007320 1.5e-61 240.4 230 51.7
SMO165G0122 Selaginella moellendorffii HOM05D001622 ORTHO05D007320 2.5e-61 239.6 226 54.9
Pp3c14_8770 Physcomitrium patens HOM05D001622 ORTHO05D007320 1.5e-58 230.3 240 50.0
MD00G1150900 Malus domestica HOM05D001622 ORTHO05D007320 2.6e-58 229.6 156 79.5
Pp3c1_30960 Physcomitrium patens HOM05D001622 ORTHO05D007320 1.1e-56 224.2 234 49.6
Pp3c2_6360 Physcomitrium patens HOM05D001622 ORTHO05D007320 1.2e-55 220.7 237 48.5
FAN25G0975 Fragaria x ananassa HOM05D001622 ORTHO05D007320 5.4e-48 195.3 116 79.3
vmacro07870 Vaccinium macrocarpon HOM05D001622 ORTHO05D007320 1.0e-46 191.0 228 48.2
Dinv42510 Davidia involucrata HOM05D001622 ORTHO05D007320 5.6e-45 185.3 110 80.0
Duzib268G1161 Durio zibethinus HOM05D001622 ORTHO05D007320 1.0e-43 181.0 106 82.1
Dinv19618 Davidia involucrata HOM05D001622 ORTHO05D007320 1.8e-43 180.3 107 80.4
Gohir.D01G027000 Gossypium hirsutum HOM05D001622 ORTHO05D007320 4.0e-43 179.1 107 79.4
Gohir.A01G039300 Gossypium hirsutum HOM05D001622 ORTHO05D007320 1.2e-42 177.6 107 79.4
SalBow1G5095 Salvia bowleyana HOM05D001622 ORTHO05D007320 1.1e-40 171.0 106 73.6
Psat4g203240 Pisum sativum HOM05D001622 ORTHO05D007320 3.2e-40 169.5 116 69.0
Sed0026267 Sechium edule HOM05D001622 ORTHO05D007320 6.0e-39 165.2 107 72.9
Sopen07g034630 Solanum pennellii HOM05D001622 ORTHO05D007320 2.3e-38 163.3 107 73.8
SalBow1G8023 Salvia bowleyana HOM05D001622 ORTHO05D007320 6.6e-38 161.8 108 71.3
Actinidia07351 Actinidia chinensis HOM05D001622 ORTHO05D007320 2.3e-35 153.3 181 52.5
Psat4g203160 Pisum sativum HOM05D001622 ORTHO05D007103 1.6e-28 130.6 85 71.8
MD00G1151000 Malus domestica HOM05D001622 ORTHO05D007320 6.2e-20 102.1 47 97.9
ECA236G5124 Erigeron canadensis HOM05D001622 ORTHO05D007320 4.6e-07 59.3 32 81.2
Mapoly0105s0037 Marchantia polymorpha HOM05D002225 ORTHO05D002271 2.3e-06 57.0 116 36.2


User provided reference genes

Program Settings