Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1224900 Malus domestica HOM05D005033 ORTHO05D007005 4.4e-71 271.2 135 100.0
MD09G1267900 Malus domestica HOM05D005033 ORTHO05D007005 5.3e-24 114.8 56 98.2
Prupe.2G096600 Prunus persica HOM05D005033 ORTHO05D007005 2.4e-21 105.9 60 90.0
MD07G1075700 Malus domestica HOM05D005033 ORTHO05D007005 4.2e-21 105.1 60 90.0
Duzib130G0002 Durio zibethinus HOM05D005033 ORTHO05D007005 1.2e-20 103.6 60 88.3
Duzib138G0857 Durio zibethinus HOM05D005033 ORTHO05D007005 1.2e-20 103.6 60 88.3
Thecc.01G170700 Theobroma cacao HOM05D005033 ORTHO05D007005 1.2e-20 103.6 60 86.7
MSTRG.405 Avicennia marina HOM05D005033 ORTHO05D007005 1.6e-20 103.2 64 81.2
CSS0020475 Camellia sinensis var. sinensis HOM05D005033 ORTHO05D007005 1.6e-20 103.2 70 74.3
CSS0041797 Camellia sinensis var. sinensis HOM05D005033 ORTHO05D007005 1.6e-20 103.2 70 74.3
MD13G1165600 Malus domestica HOM05D005033 ORTHO05D007005 1.6e-20 103.2 70 74.3
Glyma.20G190200 Glycine max HOM05D005033 ORTHO05D007005 2.7e-20 102.4 69 72.5
Gohir.A07G183600 Gossypium hirsutum HOM05D005033 ORTHO05D007005 2.7e-20 102.4 70 74.3
Gohir.D07G190300 Gossypium hirsutum HOM05D005033 ORTHO05D007005 2.7e-20 102.4 70 74.3
Gorai.001G212400 Gossypium raimondii HOM05D005033 ORTHO05D007005 2.7e-20 102.4 70 74.3
Atru.chr13.2088 Acer truncatum HOM05D005033 ORTHO05D007005 6.0e-20 101.3 69 75.4
GSVIVG01034665001 Vitis vinifera HOM05D005033 ORTHO05D007005 6.0e-20 101.3 69 73.9
Actinidia22298 Actinidia chinensis HOM05D005033 ORTHO05D007005 7.9e-20 100.9 59 86.4
Dinv31275 Davidia involucrata HOM05D005033 ORTHO05D007005 7.9e-20 100.9 69 75.4
Hma1.2p1_0446F.1_g154670 Hydrangea macrophylla HOM05D005033 ORTHO05D007005 7.9e-20 100.9 69 75.4
Cc02_g10440 Coffea canephora HOM05D005033 ORTHO05D007005 1.0e-19 100.5 59 86.4
Rhsim02G0215300 Rhododendron simsii HOM05D005033 ORTHO05D007005 1.0e-19 100.5 72 69.4
Cpa.g.sc116.23 Carica papaya HOM05D005033 ORTHO05D007005 2.3e-19 99.4 59 84.7
VMungo0720G2563 Vigna mungo HOM05D005033 ORTHO05D007005 2.3e-19 99.4 59 83.1
CSS0012290 Camellia sinensis var. sinensis HOM05D005033 ORTHO05D007005 3.0e-19 99.0 70 71.4
Glyma.10G200300 Glycine max HOM05D005033 ORTHO05D007005 3.0e-19 99.0 60 80.0
COL.COLO4_07176 Corchorus olitorius HOM05D005033 ORTHO05D007005 3.9e-19 98.6 60 83.3
Peaxi162Scf00450g00616 Petunia axillaris HOM05D005033 ORTHO05D007005 5.1e-19 98.2 59 84.7
Phvul.007G144800 Phaseolus vulgaris HOM05D005033 ORTHO05D007005 5.1e-19 98.2 59 81.4
Ciclev10003719m.g Citrus clementina HOM05D005033 ORTHO05D007005 8.7e-19 97.4 69 69.6
Lalb_Chr21g0313111 Lupinus albus HOM05D005033 ORTHO05D007005 8.7e-19 97.4 65 73.8
Oeu027297.1 Olea europaea HOM05D005033 ORTHO05D007005 8.7e-19 97.4 59 81.4
PGR083G2464 Punica granatum HOM05D005033 ORTHO05D007005 8.7e-19 97.4 59 81.4
unitig_899.g15062 Utricularia gibba HOM05D005033 ORTHO05D007005 8.7e-19 97.4 59 83.1
TAR633G0665 Trochodendron aralioides HOM05D005033 ORTHO05D007005 1.1e-18 97.1 58 84.5
DCAR_019312 Daucus carota HOM05D005033 ORTHO05D007005 1.9e-18 96.3 69 71.0
vmacro04570 Vaccinium macrocarpon HOM05D005033 ORTHO05D007005 2.5e-18 95.9 68 72.1
Nn8g40819 Nelumbo nucifera HOM05D005033 ORTHO05D007005 3.3e-18 95.5 58 82.8
CAN.G1334.3 Capsicum annuum HOM05D005033 ORTHO05D007005 7.4e-18 94.4 59 78.0
MELO3C019859.2 Cucumis melo HOM05D005033 ORTHO05D007005 7.4e-18 94.4 59 78.0
arahy.Tifrunner.gnm1.ann1.BLA122 Arachis hypogaea HOM05D005033 ORTHO05D007005 9.6e-18 94.0 67 68.7
arahy.Tifrunner.gnm1.ann1.FAT33H Arachis hypogaea HOM05D005033 ORTHO05D007005 9.6e-18 94.0 67 68.7
Nitab4.5_0004816g0020 Nicotiana tabacum HOM05D005033 ORTHO05D007005 1.6e-17 93.2 61 80.3
Eucgr.J01030 Eucalyptus grandis HOM05D005033 ORTHO05D007005 2.1e-17 92.8 69 69.6
Solyc05g008190.3 Solanum lycopersicum HOM05D005033 ORTHO05D007005 2.1e-17 92.8 59 78.0
Sopen05g004030 Solanum pennellii HOM05D005033 ORTHO05D007005 2.1e-17 92.8 59 78.0
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 2.1e-17 92.8 58 79.3
ClCG09G006560 Citrullus lanatus HOM05D005033 ORTHO05D007005 2.8e-17 92.4 59 76.3
Peaxi162Scf00159g00111 Petunia axillaris HOM05D005033 ORTHO05D007005 3.6e-17 92.0 59 79.7
Potri.008G029100 Populus trichocarpa HOM05D005033 ORTHO05D007005 4.8e-17 91.7 58 77.6
TWI34G0149 Tripterygium wilfordii HOM05D005033 ORTHO05D007005 4.8e-17 91.7 69 66.7
CsaV3_2G032850 Cucumis sativus L. HOM05D005033 ORTHO05D007005 6.2e-17 91.3 59 74.6
PGSC0003DMG400030544 Solanum tuberosum HOM05D005033 ORTHO05D007005 6.2e-17 91.3 59 76.3
ATR0598G298 Amborella trichopoda HOM05D005033 ORTHO05D007005 8.1e-17 90.9 58 75.9
Potri.010G232500 Populus trichocarpa HOM05D005033 ORTHO05D007005 8.1e-17 90.9 58 79.3
Ca_10465_v3 Cicer arietinum L. HOM05D005033 ORTHO05D007005 1.1e-16 90.5 75 58.7
CANSAT11G2161 Cannabis sativa HOM05D005033 ORTHO05D007005 1.4e-16 90.1 59 78.0
CDE08G1035 Ceratophyllum demersum HOM05D005033 ORTHO05D007005 1.8e-16 89.7 58 75.9
Haze_05486 Corylus avellana HOM05D005033 ORTHO05D007005 1.8e-16 89.7 80 62.5
Manes.04G062300 Manihot esculenta HOM05D005033 ORTHO05D007005 2.4e-16 89.4 64 70.3
Nitab4.5_0004816g0100 Nicotiana tabacum HOM05D005033 ORTHO05D007005 3.1e-16 89.0 66 71.2
Medtr1g090877 Medicago truncatula HOM05D005033 ORTHO05D007005 4.0e-16 88.6 75 57.3
AL3G21930 Arabidopsis lyrata HOM05D005033 ORTHO05D007005 5.3e-16 88.2 59 74.6
AT3G10530 Arabidopsis thaliana HOM05D005033 ORTHO05D007005 6.9e-16 87.8 59 74.6
AUR62018476 Chenopodium quinoa HOM05D005033 ORTHO05D007005 9.0e-16 87.4 58 74.1
A01p41690 Brassica napus HOM05D005033 ORTHO05D004473 1.2e-15 87.0 69 65.2
BolC1t05387H Brassica oleracea HOM05D005033 ORTHO05D007005 1.2e-15 87.0 69 65.2
BraA01t04244Z Brassica rapa HOM05D005033 ORTHO05D007005 1.2e-15 87.0 69 65.2
Carub.0003s0977 Capsella rubella HOM05D005033 ORTHO05D007005 1.5e-15 86.7 69 63.8
Lj5g0024582 Lotus japonicus HOM05D005033 ORTHO05D007005 1.5e-15 86.7 70 62.9
CiPaw.12G008100 Carya illinoinensis HOM05D005033 ORTHO05D007005 2.0e-15 86.3 59 76.3
FAN10G0702 Fragaria x ananassa HOM05D005033 ORTHO05D007005 2.6e-15 85.9 59 74.6
QL05p060417 Quercus lobata HOM05D005033 ORTHO05D007005 2.6e-15 85.9 73 61.6
Sabra10G0180300 Salix brachista HOM05D005033 ORTHO05D007005 2.6e-15 85.9 58 74.1
FAN01G1898 Fragaria x ananassa HOM05D005033 ORTHO05D007005 3.4e-15 85.5 59 74.6
Psat6g174240 Pisum sativum HOM05D005033 ORTHO05D007005 3.4e-15 85.5 75 57.3
THA.LOC104826968 Tarenaya hassleriana HOM05D005033 ORTHO05D007005 3.4e-15 85.5 69 62.3
BcaB04g21233 Brassica carinata HOM05D005033 ORTHO05D007005 4.5e-15 85.1 59 72.9
A05p38630 Brassica napus HOM05D005033 ORTHO05D004473 4.5e-15 85.1 69 62.3
BolC5t34408H Brassica oleracea HOM05D005033 ORTHO05D004473 4.5e-15 85.1 69 62.3
BraA05t22654Z Brassica rapa HOM05D005033 ORTHO05D007005 4.5e-15 85.1 69 62.3
BcaNung04933 Brassica carinata HOM05D005033 ORTHO05D007005 5.8e-15 84.7 59 71.2
BcaNung06294 Brassica carinata HOM05D005033 ORTHO05D007005 5.8e-15 84.7 69 62.3
C05p57510 Brassica napus HOM05D005033 ORTHO05D004473 5.8e-15 84.7 69 62.3
CARHR085050 Cardamine hirsuta HOM05D005033 ORTHO05D007005 5.8e-15 84.7 59 71.2
FAN03G1010 Fragaria x ananassa HOM05D005033 ORTHO05D007005 5.8e-15 84.7 59 74.6
Lsat_1_v5_gn_5_142541 Lactuca sativa HOM05D005033 ORTHO05D007005 5.8e-15 84.7 70 64.3
Lj4A548T13 Lonicera japonica HOM05D005033 ORTHO05D007005 5.8e-15 84.7 58 70.7
RcHm_v2.0_Chr1g0336741 Rosa chinensis HOM05D005033 ORTHO05D007005 5.8e-15 84.7 59 76.3
Sp3g08810 Schrenkiella parvula HOM05D005033 ORTHO05D007005 5.8e-15 84.7 69 62.3
ECA236G1450 Erigeron canadensis HOM05D005033 ORTHO05D007005 7.6e-15 84.3 74 59.5
Aqoxy6G00730 Aquilegia oxysepala HOM05D005033 ORTHO05D007005 1.7e-14 83.2 58 69.0
BcaC05g29453 Brassica carinata HOM05D005033 ORTHO05D004473 1.7e-14 83.2 69 60.9
EL10Ac3g05920 Beta vulgaris HOM05D005033 ORTHO05D007005 2.2e-14 82.8 58 69.0
Sed0023623 Sechium edule HOM05D005033 ORTHO05D007005 2.2e-14 82.8 58 74.1
Sc09g0005810 Simmondsia chinensis HOM05D005033 ORTHO05D007005 2.9e-14 82.4 60 68.3
Aqoxy7G00894 Aquilegia oxysepala HOM05D005033 ORTHO05D007005 4.9e-14 81.6 58 67.2
HPP92_022999 Vanilla planifolia HOM05D005033 ORTHO05D007005 4.9e-14 81.6 58 67.2
SHI01926 Sapria himalayana HOM05D005033 ORTHO05D007005 6.4e-14 81.3 114 44.7
Sed0004918 Sechium edule HOM05D005033 ORTHO05D007005 5.5e-13 78.2 59 62.7
HanXRQChr04g0126221 Helianthus annuus HOM05D005033 ORTHO05D007005 1.2e-12 77.0 73 56.2
Lj4A576G37 Lonicera japonica HOM05D005033 ORTHO05D007005 2.1e-12 76.3 59 67.8
Hund09612 Selenicereus undatus HOM05D005033 ORTHO05D007005 2.7e-12 75.9 58 69.0
Mapoly0082s0024 Marchantia polymorpha HOM05D005033 ORTHO05D007005 4.6e-12 75.1 59 62.7
PSO063G4428 Papaver somniferum HOM05D005033 ORTHO05D007005 6.0e-12 74.7 65 60.0
TPR.G37792 Trifolium pratense HOM05D005033 ORTHO05D007005 7.9e-12 74.3 60 61.7
PSO339G5947 Papaver somniferum HOM05D005033 ORTHO05D007005 1.3e-11 73.6 59 64.4
Os01g0183100 Oryza sativa ssp. japonica HOM05D005033 ORTHO05D007005 2.3e-11 72.8 60 63.3
Zm00001eb272000 Zea mays HOM05D005033 ORTHO05D007005 5.1e-11 71.6 64 56.2
Migut.F01668 Erythranthe guttata HOM05D005033 ORTHO05D007005 1.1e-10 70.5 45 80.0
Thhalv10020478m.g Eutrema salsugineum HOM05D005033 ORTHO05D007005 1.1e-10 70.5 59 59.3
Ah.01g017010 Amaranthus hybridus HOM05D005033 ORTHO05D007005 2.1e-09 66.2 58 55.2
Aa31LG4G2160 Aethionema arabicum HOM05D005033 ORTHO05D007005 2.8e-09 65.9 44 72.7
Pp3c1_3590 Physcomitrium patens HOM05D005033 ORTHO05D007005 1.1e-08 63.9 58 51.7
SMO367G1111 Selaginella moellendorffii HOM05D005033 ORTHO05D007005 1.8e-08 63.2 65 52.3
FvH4_7g06900 Fragaria vesca HOM05D005033 ORTHO05D007005 5.3e-08 61.6 59 57.6
FAN06G3772 Fragaria x ananassa HOM05D005033 ORTHO05D007005 5.3e-08 61.6 59 57.6
Ciclev10003777m.g Citrus clementina HOM05D005033 ORTHO05D007005 1.0e-06 57.4 57 56.1
PRCOL_00001195 Prasinoderma coloniale HOM05D005033 ORTHO05D007005 1.3e-06 57.0 59 49.2
Cre12.g502800 Chlamydomonas reinhardtii HOM05D005033 ORTHO05D007005 8.4e-06 54.3 85 37.6


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