Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 4.0e-70 268.1 147 100.0
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 2.8e-39 165.6 149 69.1
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 2.4e-38 162.5 125 75.2
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.6e-37 159.8 137 69.3
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.1e-34 149.4 115 76.5
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.7e-34 149.1 114 75.4
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 8.0e-34 147.5 115 75.7
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 8.8e-33 144.1 125 67.2
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 6.3e-31 137.9 119 67.2
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 6.3e-31 137.9 119 67.2
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 1.8e-30 136.3 137 59.9
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 9.1e-30 134.0 151 56.3
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 9.1e-30 134.0 107 68.2
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 1.2e-29 133.7 96 72.9
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 2.0e-29 132.9 119 65.5
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 2.7e-29 132.5 101 70.3
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 3.5e-29 132.1 113 65.5
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 5.9e-29 131.3 103 68.9
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 7.7e-29 131.0 115 63.5
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 1.0e-28 130.6 136 57.4
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 1.0e-28 130.6 117 61.5
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 1.0e-28 130.6 112 65.2
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 2.2e-28 129.4 117 63.2
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 2.9e-28 129.0 140 54.3
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 3.8e-28 128.6 131 58.0
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 3.8e-28 128.6 124 58.9
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 1.1e-27 127.1 139 55.4
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 1.1e-27 127.1 92 73.9
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.5e-27 126.7 138 52.9
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 1.9e-27 126.3 109 62.4
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 2.5e-27 125.9 96 67.7
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 3.2e-27 125.6 96 66.7
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 3.2e-27 125.6 121 62.0
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 4.2e-27 125.2 117 61.5
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 5.5e-27 124.8 106 64.2
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 5.5e-27 124.8 138 52.2
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 7.2e-27 124.4 93 68.8
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 9.4e-27 124.0 93 68.8
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 1.2e-26 123.6 124 57.3
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 2.1e-26 122.9 105 61.0
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 2.7e-26 122.5 131 55.7
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 3.6e-26 122.1 131 58.8
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 3.6e-26 122.1 127 57.5
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 4.7e-26 121.7 114 59.6
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 4.7e-26 121.7 92 69.6
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 6.1e-26 121.3 108 60.2
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 8.0e-26 120.9 114 56.1
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 1.0e-25 120.6 116 58.6
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 1.0e-25 120.6 135 57.0
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.0e-25 120.6 132 53.8
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 1.4e-25 120.2 119 57.1
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 1.8e-25 119.8 111 55.9
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 1.8e-25 119.8 124 55.6
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 3.0e-25 119.0 123 57.7
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 4.0e-25 118.6 92 65.2
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 4.0e-25 118.6 119 58.0
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 6.8e-25 117.9 97 63.9
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 1.5e-24 116.7 115 57.4
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 2.0e-24 116.3 97 62.9
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 2.0e-24 116.3 112 59.8
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 2.6e-24 115.9 100 62.0
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 3.4e-24 115.5 94 67.0
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 5.7e-24 114.8 118 59.3
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 7.5e-24 114.4 119 54.6
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 9.8e-24 114.0 89 68.5
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 9.8e-24 114.0 114 56.1
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 9.8e-24 114.0 84 71.4
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 1.3e-23 113.6 90 67.8
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.7e-23 113.2 122 53.3
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 2.2e-23 112.8 91 63.7
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 2.2e-23 112.8 94 62.8
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 3.7e-23 112.1 95 66.3
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 3.7e-23 112.1 121 53.7
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 3.7e-23 112.1 105 59.0
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 6.3e-23 111.3 125 54.4
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 8.3e-23 110.9 96 61.5
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 1.4e-22 110.2 90 63.3
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 1.4e-22 110.2 90 63.3
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 1.4e-22 110.2 90 63.3
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 1.4e-22 110.2 121 54.5
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 2.4e-22 109.4 92 63.0
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 3.1e-22 109.0 127 52.0
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 4.1e-22 108.6 90 62.2
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 4.1e-22 108.6 90 62.2
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 4.1e-22 108.6 90 62.2
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 5.4e-22 108.2 118 53.4
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 9.1e-22 107.5 83 65.1
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 1.2e-21 107.1 95 60.0
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 3.5e-21 105.5 120 52.5
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 5.9e-21 104.8 115 51.3
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 1.0e-20 104.0 121 51.2
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 1.0e-20 104.0 124 50.8
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 5.0e-20 101.7 151 43.7
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 8.6e-20 100.9 119 50.4
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.5e-19 100.1 83 62.7
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 4.2e-19 98.6 78 64.1
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.6e-18 96.7 139 43.9
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 8.0e-18 94.4 111 49.5
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 5.2e-17 91.7 119 46.2
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 9.8e-16 87.4 125 47.2
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 9.8e-16 87.4 92 48.9
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 9.8e-16 87.4 89 44.9
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 3.7e-15 85.5 106 44.3
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 1.8e-14 83.2 94 47.9
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 1.8e-14 83.2 78 57.7
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 3.1e-14 82.4 118 41.5
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 3.5e-13 79.0 97 48.5
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 4.5e-13 78.6 92 42.4
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 4.5e-13 78.6 52 75.0
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 6.6e-12 74.7 114 43.0
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 2.5e-11 72.8 90 44.4
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 8.0e-10 67.8 90 41.1
Haze_08531 Corylus avellana HOM05D007055 ORTHO05D008943 1.1e-06 57.4 43 67.4


User provided reference genes

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