Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1215800 Malus domestica HOM05D006849 ORTHO05D003348 3.3e-62 241.5 119 100.0
MD02G1249900 Malus domestica HOM05D006849 ORTHO05D003348 7.9e-48 193.7 105 85.7
MD08G1229500 Malus domestica HOM05D006849 ORTHO05D003348 7.9e-40 167.2 116 66.4
MD05G1167800 Malus domestica HOM05D006849 ORTHO05D003348 3.9e-23 111.7 68 72.1
MD10G1198900 Malus domestica HOM05D006849 ORTHO05D003348 6.5e-18 94.4 97 46.4
MD07G1020000 Malus domestica HOM05D006849 ORTHO05D003348 3.0e-15 85.5 45 84.4
MD17G1262000 Malus domestica HOM05D006849 ORTHO05D003348 2.5e-14 82.4 97 40.2
MD04G1002000 Malus domestica HOM05D029265 ORTHO05D003348 9.1e-12 73.9 128 29.7
MD14G1125700 Malus domestica HOM05D006849 ORTHO05D003348 5.9e-11 71.2 37 83.8
MD14G1083800 Malus domestica HOM05D006849 ORTHO05D003348 1.4e-09 66.6 62 50.0
FvH4_5g19920 Fragaria vesca HOM05D006849 ORTHO05D003348 1.9e-09 66.2 84 38.1
FAN15G3621 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.9e-09 66.2 84 38.1
FAN16G1806 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.5e-09 65.9 84 38.1
FAN23G2888 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.5e-09 65.9 84 38.1
RcHm_v2.0_Chr2g0133251 Rosa chinensis HOM05D006849 ORTHO05D003348 1.6e-08 63.2 88 34.1
RcHm_v2.0_Chr2g0141711 Rosa chinensis HOM05D006849 ORTHO05D003348 4.7e-08 61.6 104 32.7
RcHm_v2.0_Chr1g0371171 Rosa chinensis HOM05D006849 ORTHO05D003348 6.1e-08 61.2 86 32.6
RcHm_v2.0_Chr2g0174211 Rosa chinensis HOM05D006849 ORTHO05D003348 7.9e-08 60.8 68 35.3
RcHm_v2.0_Chr1g0379271 Rosa chinensis HOM05D006849 ORTHO05D003348 1.4e-07 60.1 121 28.1
FAN06G4964 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.8e-07 59.7 112 33.9
FAN02G2385 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.3e-07 59.3 112 33.9
RcHm_v2.0_Chr2g0135141 Rosa chinensis HOM05D006849 ORTHO05D003348 2.3e-07 59.3 73 37.0
RcHm_v2.0_Chr2g0149141 Rosa chinensis HOM05D006849 ORTHO05D003348 2.0e-06 56.2 88 31.8
RcHm_v2.0_Chr5g0010461 Rosa chinensis HOM05D006849 ORTHO05D003348 2.0e-06 56.2 88 31.8
RcHm_v2.0_Chr7g0206181 Rosa chinensis HOM05D006849 ORTHO05D003348 2.6e-06 55.8 89 29.2
Potri.003G004301 Populus trichocarpa HOM05D018388 ORTHO05D003348 5.7e-06 54.7 106 27.4
FAN21G3588 Fragaria x ananassa HOM05D006849 ORTHO05D003348 7.4e-06 54.3 117 25.6
FvH4_2g22171 Fragaria vesca HOM05D006849 ORTHO05D003348 9.7e-06 53.9 118 30.5
Potri.014G182232 Populus trichocarpa HOM05D018388 ORTHO05D003348 9.7e-06 53.9 106 26.4


User provided reference genes

Program Settings