Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 3.6e-55 218.0 109 100.0
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 2.7e-47 191.8 109 89.9
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 4.4e-45 184.5 109 86.2
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.3e-41 172.9 109 78.9
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 2.9e-41 171.8 109 78.0
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 2.9e-41 171.8 109 78.0
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 2.9e-41 171.8 110 79.1
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 6.5e-41 170.6 112 76.8
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 8.5e-41 170.2 108 78.7
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 4.2e-40 167.9 110 77.3
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 5.5e-40 167.5 108 78.7
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 5.5e-40 167.5 108 78.7
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.2e-39 166.4 109 76.1
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.2e-39 166.4 109 76.1
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 1.6e-39 166.0 108 75.9
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 2.7e-39 165.2 109 77.1
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 2.7e-39 165.2 109 76.1
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 4.7e-39 164.5 108 75.0
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 4.7e-39 164.5 112 74.1
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 6.1e-39 164.1 110 75.5
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 8.0e-39 163.7 109 77.1
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 1.0e-38 163.3 110 72.7
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 1.0e-38 163.3 112 74.1
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 1.4e-38 162.9 108 75.0
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 2.3e-38 162.2 112 74.1
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 3.0e-38 161.8 108 74.1
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 4.0e-38 161.4 108 74.1
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 4.0e-38 161.4 108 75.0
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 4.0e-38 161.4 109 74.3
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 4.0e-38 161.4 108 75.9
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 5.2e-38 161.0 111 73.0
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 5.2e-38 161.0 108 75.0
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 6.7e-38 160.6 109 70.6
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 8.8e-38 160.2 108 75.9
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 8.8e-38 160.2 106 75.5
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 8.8e-38 160.2 108 75.0
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 8.8e-38 160.2 108 74.1
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 1.2e-37 159.8 108 73.1
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 1.2e-37 159.8 112 72.3
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 1.5e-37 159.5 112 71.4
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 2.0e-37 159.1 108 74.1
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 2.0e-37 159.1 108 74.1
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 2.0e-37 159.1 108 72.2
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 2.0e-37 159.1 108 73.1
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 2.6e-37 158.7 108 74.1
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 2.6e-37 158.7 111 69.4
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 2.6e-37 158.7 108 74.1
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 3.3e-37 158.3 108 73.1
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 3.3e-37 158.3 108 73.1
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 4.4e-37 157.9 108 74.1
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 4.4e-37 157.9 107 74.8
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 4.4e-37 157.9 108 75.0
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 4.4e-37 157.9 112 71.4
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 4.4e-37 157.9 108 73.1
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 4.4e-37 157.9 108 71.3
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 7.5e-37 157.1 111 73.0
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 9.7e-37 156.8 108 73.1
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 9.7e-37 156.8 108 73.1
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 9.7e-37 156.8 108 75.0
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 9.7e-37 156.8 112 73.2
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 9.7e-37 156.8 108 73.1
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 9.7e-37 156.8 109 73.4
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 1.7e-36 156.0 109 72.5
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 1.7e-36 156.0 110 72.7
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 1.7e-36 156.0 111 71.2
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 2.2e-36 155.6 109 71.6
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 2.2e-36 155.6 109 69.7
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 2.8e-36 155.2 108 72.2
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 2.8e-36 155.2 112 70.5
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 3.7e-36 154.8 109 75.2
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 3.7e-36 154.8 108 71.3
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 4.8e-36 154.5 108 72.2
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 4.8e-36 154.5 109 74.3
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 6.3e-36 154.1 111 70.3
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 6.3e-36 154.1 108 70.4
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 8.2e-36 153.7 109 70.6
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 1.1e-35 153.3 108 71.3
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 1.1e-35 153.3 112 70.5
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 1.4e-35 152.9 111 69.4
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 1.8e-35 152.5 108 70.4
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 1.8e-35 152.5 111 70.3
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 2.4e-35 152.1 103 73.8
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 2.4e-35 152.1 110 71.8
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 3.1e-35 151.8 109 68.8
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 5.3e-35 151.0 102 73.5
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 7.0e-35 150.6 108 69.4
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 9.1e-35 150.2 107 72.0
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 1.2e-34 149.8 109 69.7
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 1.6e-34 149.4 111 67.6
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 2.0e-34 149.1 111 67.6
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 4.5e-34 147.9 109 68.8
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 1.7e-33 146.0 109 67.0
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 1.7e-33 146.0 107 70.1
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 5.0e-33 144.4 107 68.2
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 5.0e-33 144.4 105 74.3
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 3.2e-32 141.7 115 65.2
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 9.4e-32 140.2 108 63.9
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 1.2e-31 139.8 95 76.8
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 3.6e-31 138.3 115 63.5
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 3.6e-31 138.3 115 63.5
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 4.7e-31 137.9 112 58.0
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 1.2e-29 133.3 107 63.6
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 7.5e-29 130.6 113 62.8
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 8.3e-28 127.1 111 62.2
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 8.3e-28 127.1 116 59.5
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.4e-27 126.3 111 64.0
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 1.8e-27 125.9 107 59.8
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 9.1e-27 123.6 110 58.2
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 1.6e-26 122.9 104 64.4
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 2.7e-26 122.1 110 58.2
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 2.3e-25 119.0 107 57.9
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 2.5e-24 115.5 112 53.6
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 2.8e-23 112.1 110 60.9
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 5.2e-22 107.8 81 69.1
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 1.1e-19 100.1 68 69.1
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 3.6e-15 85.1 73 64.4
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 8.0e-15 84.0 120 43.3
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 1.0e-14 83.6 73 63.0
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 1.0e-14 83.6 103 46.6
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 3.2e-11 72.0 118 39.8
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 1.1e-06 57.0 45 66.7


User provided reference genes

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