Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1206600 Malus domestica HOM05D000007 ORTHO05D020700 3.2e-65 251.5 121 100.0
Prupe.5G081800 Prunus persica HOM05D000007 ORTHO05D000039 3.8e-34 148.3 133 54.9
Prupe.4G150700 Prunus persica HOM05D000007 ORTHO05D000039 3.3e-33 145.2 135 54.1
Prupe.4G151000 Prunus persica HOM05D000007 ORTHO05D000039 1.4e-31 139.8 136 52.9
Prupe.4G151100 Prunus persica HOM05D000007 ORTHO05D000039 7.0e-28 127.5 142 47.2
Prupe.4G221400 Prunus persica HOM05D000007 ORTHO05D000039 2.7e-27 125.6 142 45.8
MD09G1091100 Malus domestica HOM05D000007 ORTHO05D000039 1.9e-25 119.4 143 47.6
Prupe.5G081900 Prunus persica HOM05D000007 ORTHO05D000039 1.6e-24 116.3 152 44.1
Prupe.6G096300 Prunus persica HOM05D000007 ORTHO05D000039 3.6e-24 115.2 140 44.3
FvH4_3g18860 Fragaria vesca HOM05D000007 ORTHO05D000039 1.8e-23 112.8 134 47.0
RcHm_v2.0_Chr5g0031731 Rosa chinensis HOM05D000007 ORTHO05D000039 1.8e-23 112.8 133 49.6
FAN16G0092 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-22 110.2 133 48.1
FAN11G1989 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.4e-22 108.6 133 47.4
FvH4_3g16860 Fragaria vesca HOM05D000007 ORTHO05D000039 1.7e-21 106.3 135 48.1
FvH4_3g18910 Fragaria vesca HOM05D000007 ORTHO05D000039 8.3e-21 104.0 137 44.5
RcHm_v2.0_Chr1g0348511 Rosa chinensis HOM05D000007 ORTHO05D000039 1.9e-20 102.8 133 46.6
RcHm_v2.0_Chr5g0031741 Rosa chinensis HOM05D000007 ORTHO05D000039 2.4e-20 102.4 133 45.1
RcHm_v2.0_Chr5g0031801 Rosa chinensis HOM05D000007 ORTHO05D000039 4.1e-20 101.7 133 46.6
RcHm_v2.0_Chr5g0075881 Rosa chinensis HOM05D000007 ORTHO05D000039 5.4e-20 101.3 135 44.4
RcHm_v2.0_Chr5g0031751 Rosa chinensis HOM05D000007 ORTHO05D000039 7.0e-20 100.9 133 42.9
FvH4_3g18950 Fragaria vesca HOM05D000007 ORTHO05D000039 2.7e-19 99.0 125 45.6
FvH4_3g18920 Fragaria vesca HOM05D000007 ORTHO05D000039 2.3e-18 95.9 133 41.4
FAN21G3072 Fragaria x ananassa HOM05D000007 ORTHO05D020700 3.0e-18 95.5 120 46.7
FAN11G3730 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.6e-18 94.4 128 45.3
FAN16G0172 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.6e-18 94.4 142 40.1
FAN28G1507 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.1e-17 93.6 127 45.7
FvH4_3g42380 Fragaria vesca HOM05D000007 ORTHO05D000039 3.3e-17 92.0 149 38.9
FvH4_3g18911 Fragaria vesca HOM05D000007 ORTHO05D000039 4.3e-17 91.7 133 41.4
FAN11G0632 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.3e-17 91.7 118 46.6
FAN11G0403 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.6e-17 91.3 125 40.8
MD11G1031100 Malus domestica HOM05D000007 ORTHO05D000039 9.5e-17 90.5 139 39.6
FAN21G0203 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.6e-16 89.7 123 41.5
FAN21G3753 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.6e-16 89.7 123 41.5
RcHm_v2.0_Chr5g0031771 Rosa chinensis HOM05D000007 ORTHO05D000039 2.1e-16 89.4 132 38.6
FAN11G2343 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.8e-16 89.0 133 40.6
FvH4_3g42390 Fragaria vesca HOM05D000007 ORTHO05D000039 3.6e-16 88.6 127 41.7
FvH4_3g18870 Fragaria vesca HOM05D000007 ORTHO05D000039 6.2e-16 87.8 94 46.8
FAN25G2864 Fragaria x ananassa HOM05D000007 ORTHO05D020700 8.1e-16 87.4 125 41.6
FAN21G2633 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.3e-15 85.9 110 47.3
FvH4_3g18890 Fragaria vesca HOM05D000007 ORTHO05D000039 3.1e-15 85.5 108 47.2
RcHm_v2.0_Chr5g0075091 Rosa chinensis HOM05D000007 ORTHO05D000039 4.0e-15 85.1 125 41.6
FAN16G0793 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.8e-15 84.3 110 45.5
FAN11G3902 Fragaria x ananassa HOM05D000007 ORTHO05D000039 8.9e-15 84.0 83 51.8
FAN25G3153 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.5e-14 83.2 122 41.8
MD03G1028300 Malus domestica HOM05D000007 ORTHO05D000039 2.0e-14 82.8 106 43.4
MD03G1028000 Malus domestica HOM05D000007 ORTHO05D000039 3.4e-14 82.0 101 44.6
RcHm_v2.0_Chr5g0075101 Rosa chinensis HOM05D000007 ORTHO05D000039 3.4e-14 82.0 132 40.2
FAN06G4185 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.5e-14 80.9 147 39.5
FAN28G1446 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.5e-14 80.9 119 41.2
FvH4_3g16840 Fragaria vesca HOM05D000007 ORTHO05D000039 3.7e-13 78.6 123 39.0
FAN19G0203 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.1e-12 77.0 119 37.8
Prupe.4G190200 Prunus persica HOM05D000007 ORTHO05D000039 1.1e-12 77.0 95 45.3
RcHm_v2.0_Chr5g0061121 Rosa chinensis HOM05D000007 ORTHO05D000039 1.4e-12 76.6 154 35.1
FAN16G3299 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.4e-12 75.9 123 37.4
FAN11G3667 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.2e-12 75.5 123 38.2
FAN16G0767 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.2e-12 75.5 98 49.0
FvH4_1g04460 Fragaria vesca HOM05D000007 ORTHO05D020700 4.1e-12 75.1 93 46.2
MD03G1027900 Malus domestica HOM05D000007 ORTHO05D000039 4.1e-12 75.1 102 41.2
FAN11G3498 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.4e-12 74.7 98 49.0
RcHm_v2.0_Chr5g0028051 Rosa chinensis HOM05D000007 ORTHO05D000039 1.2e-11 73.6 129 38.0
MD03G1028200 Malus domestica HOM05D000007 ORTHO05D000039 2.1e-11 72.8 112 42.9
FvH4_1g04040 Fragaria vesca HOM05D000007 ORTHO05D000039 2.7e-11 72.4 119 37.0
FvH4_3g41900 Fragaria vesca HOM05D000007 ORTHO05D000039 7.8e-11 70.9 124 35.5
FvH4_3g18972 Fragaria vesca HOM05D000007 ORTHO05D000039 1.3e-10 70.1 141 34.8
FvH4_3g18971 Fragaria vesca HOM05D000007 ORTHO05D000039 6.6e-10 67.8 121 39.7
FvH4_3g18970 Fragaria vesca HOM05D000007 ORTHO05D000039 1.2e-08 63.5 99 40.4
QL08p020054 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-08 62.8 87 34.5
QL08p020067 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-08 62.8 87 34.5
MD03G1028400 Malus domestica HOM05D000007 ORTHO05D000039 3.6e-08 62.0 127 33.1
FAN21G0628 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.7e-08 61.6 132 38.6
FvH4_3g41891 Fragaria vesca HOM05D000007 ORTHO05D000039 8.1e-08 60.8 120 36.7
FAN11G3185 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.1e-07 60.5 116 34.5
MD03G1028100 Malus domestica HOM05D000007 ORTHO05D000039 1.1e-07 60.5 107 36.4
FAN25G1711 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.1e-07 58.9 117 33.3
FAN21G2501 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.0e-07 58.5 101 37.6
QL07p003114 Quercus lobata HOM05D000007 ORTHO05D000039 4.0e-07 58.5 86 41.9
QL07p003134 Quercus lobata HOM05D000007 ORTHO05D000039 5.2e-07 58.2 103 36.9
FvH4_3g16850 Fragaria vesca HOM05D000007 ORTHO05D000039 8.9e-07 57.4 126 34.9
QL08p020302 Quercus lobata HOM05D000007 ORTHO05D000039 8.9e-07 57.4 99 35.4
RcHm_v2.0_Chr5g0057531 Rosa chinensis HOM05D058191 ORTHO05D020700 8.9e-07 57.4 59 49.2
FAN11G3242 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-06 57.0 85 41.2
Duzib268G1877 Durio zibethinus HOM05D000007 ORTHO05D000039 1.5e-06 56.6 96 41.7
RcHm_v2.0_Chr5g0003271 Rosa chinensis HOM05D058191 ORTHO05D020700 2.0e-06 56.2 59 50.8
QL11p003050 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-06 55.8 125 32.0
RcHm_v2.0_Chr5g0054431 Rosa chinensis HOM05D000007 ORTHO05D000039 3.4e-06 55.5 117 32.5
QL07p003322 Quercus lobata HOM05D000007 ORTHO05D000039 5.8e-06 54.7 77 36.4


User provided reference genes

Program Settings