Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 8.0e-149 530.4 269 100.0
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 4.6e-120 434.9 269 83.6
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 1.3e-119 433.3 267 83.1
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.5e-118 429.9 269 82.5
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 6.2e-117 424.5 273 81.0
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 3.8e-114 415.2 264 79.2
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 4.6e-112 408.3 261 77.0
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 1.1e-110 403.7 269 75.5
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 1.1e-110 403.7 269 74.7
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 8.1e-109 397.5 264 74.6
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 1.1e-108 397.1 261 76.6
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 1.4e-108 396.7 267 77.5
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 2.0e-107 392.9 263 73.8
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 2.6e-107 392.5 267 74.2
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 9.9e-107 390.6 278 72.7
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 1.3e-106 390.2 279 72.4
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 3.8e-106 388.7 264 73.9
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 4.9e-106 388.3 297 69.7
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 4.9e-106 388.3 262 74.0
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 4.9e-106 388.3 262 74.4
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 3.2e-105 385.6 262 74.0
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 4.2e-105 385.2 256 75.4
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.2e-104 383.6 269 70.3
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 3.5e-104 382.1 278 71.2
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 3.5e-104 382.1 268 71.6
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 3.0e-103 379.0 296 66.2
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 1.5e-102 376.7 238 76.1
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 4.3e-102 375.2 260 73.1
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 5.6e-102 374.8 263 71.1
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 7.3e-102 374.4 277 70.4
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 7.3e-102 374.4 263 70.7
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 9.6e-102 374.0 271 74.5
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 1.3e-101 373.6 243 76.1
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 1.6e-101 373.2 256 71.5
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 1.6e-101 373.2 259 70.7
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 1.6e-101 373.2 241 76.3
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 3.6e-101 372.1 239 77.4
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 1.1e-100 370.5 265 70.2
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 1.4e-100 370.2 265 70.2
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 1.8e-100 369.8 271 69.7
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 2.4e-100 369.4 265 68.7
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 5.3e-100 368.2 263 70.0
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 6.9e-100 367.9 237 74.3
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 6.9e-100 367.9 271 69.4
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 4.5e-99 365.2 262 69.1
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 7.6e-99 364.4 243 72.0
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 1.7e-98 363.2 263 68.4
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 1.7e-98 363.2 227 78.4
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 1.7e-98 363.2 263 68.4
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 1.7e-98 363.2 263 68.4
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 8.4e-98 360.9 237 73.0
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 1.4e-97 360.1 277 65.3
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 1.4e-97 360.1 260 70.0
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 2.4e-97 359.4 243 70.8
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 2.4e-97 359.4 241 71.8
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 4.2e-97 358.6 243 71.6
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 9.3e-97 357.5 312 60.6
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 2.1e-96 356.3 268 64.9
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 2.1e-96 356.3 270 65.6
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 4.6e-96 355.1 268 68.3
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 1.3e-95 353.6 260 66.9
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 3.0e-95 352.4 240 72.5
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 3.0e-95 352.4 247 70.4
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 6.7e-95 351.3 243 70.0
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 8.7e-95 350.9 255 69.8
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 1.1e-94 350.5 243 69.1
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 1.1e-94 350.5 239 71.1
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 1.9e-94 349.7 271 65.3
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 7.4e-94 347.8 243 68.3
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 1.6e-93 346.7 243 68.3
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 2.1e-93 346.3 260 66.5
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 1.4e-92 343.6 242 67.8
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 1.8e-92 343.2 244 68.0
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 4.0e-92 342.0 244 67.6
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 6.9e-92 341.3 222 74.3
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 3.4e-91 339.0 266 63.5
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 1.7e-90 336.7 213 76.1
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 6.4e-90 334.7 212 75.9
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 2.4e-89 332.8 259 63.7
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 3.5e-88 328.9 212 74.1
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 9.6e-86 320.9 267 60.7
Nn1g02801 Nelumbo nucifera HOM05D006747 ORTHO05D008384 2.1e-85 319.7 261 65.1
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 9.0e-84 314.3 213 70.9
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 2.0e-83 313.2 210 73.3
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 2.1e-80 303.1 415 43.6
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 4.6e-80 302.0 189 77.2
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 1.0e-79 300.8 254 61.4
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 8.7e-79 297.7 277 60.3
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 1.5e-78 297.0 243 61.7
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 1.1e-70 270.8 176 72.7
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 9.7e-70 267.7 252 53.6
Nitab4.5_0005593g0070 Nicotiana tabacum HOM05D006747 ORTHO05D008384 2.8e-69 266.2 218 64.2
Nitab4.5_0000326g0130 Nicotiana tabacum HOM05D006747 ORTHO05D008384 1.1e-68 264.2 242 60.7
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 1.3e-66 257.3 274 48.9
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 6.5e-66 255.0 232 56.0
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 8.5e-66 254.6 205 62.4
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 1.4e-60 237.3 181 69.1
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 7.7e-59 231.5 181 64.1
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 2.1e-56 223.4 157 75.8
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 3.3e-54 216.1 229 48.9
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 2.0e-46 190.3 163 61.3
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 2.0e-38 163.7 90 87.8
SEGI_35883 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.1e-28 131.3 89 67.4
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 3.6e-24 116.3 73 74.0
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 5.2e-23 112.5 96 54.2
Cpa.g.sc165.14 Carica papaya HOM05D006747 ORTHO05D008384 5.7e-22 109.0 85 69.4
Hma1.2p1_0273F.1_g109560 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 1.3e-21 107.8 73 68.5
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 5.4e-20 102.4 61 78.7
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 3.5e-19 99.8 70 74.3
Duzib133G0415 Durio zibethinus HOM05D006747 ORTHO05D008384 1.1e-12 78.2 49 73.5
SEGI_37670 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 2.4e-12 77.0 54 66.7
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 4.1e-12 76.3 56 57.1
Actinidia34401 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.7e-10 70.9 54 55.6
Gohir.A07G149550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 5.0e-10 69.3 86 50.0
Gohir.A07G213740 Gossypium hirsutum HOM05D006747 ORTHO05D008384 8.6e-10 68.6 153 31.4
Cre07.g348951 Chlamydomonas reinhardtii HOM05D006747 ORTHO05D008384 2.3e-07 60.5 108 30.6


User provided reference genes

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