Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1181500 Malus domestica HOM05D007427 ORTHO05D006413 2.1e-30 136.3 72 100.0
RcHm_v2.0_Chr6g0285411 Rosa chinensis HOM05D007427 ORTHO05D006413 1.9e-20 103.2 66 84.8
Prupe.8G208000 Prunus persica HOM05D007427 ORTHO05D006413 3.3e-20 102.4 58 86.2
FAN15G2923 Fragaria x ananassa HOM05D007427 ORTHO05D006413 9.2e-15 84.3 64 78.1
FvH4_2g19680 Fragaria vesca HOM05D007427 ORTHO05D006413 1.2e-14 84.0 64 76.6
FAN24G2151 Fragaria x ananassa HOM05D007427 ORTHO05D006413 2.7e-14 82.8 63 76.2
FAN27G1788 Fragaria x ananassa HOM05D007427 ORTHO05D006413 2.7e-14 82.8 64 76.6
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 2.1e-11 73.2 62 69.4
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 2.1e-11 73.2 61 59.0
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 6.2e-11 71.6 61 63.9
QL09p044390 Quercus lobata HOM05D007427 ORTHO05D006413 1.1e-10 70.9 68 61.8
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 1.4e-10 70.5 64 64.1
Haze_24760 Corylus avellana HOM05D007427 ORTHO05D006413 1.8e-10 70.1 59 66.1
Medtr1g069085 Medicago truncatula HOM05D007427 ORTHO05D006413 4.0e-10 68.9 59 62.7
Psat6g064560 Pisum sativum HOM05D007427 ORTHO05D006413 5.2e-10 68.6 66 59.1
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 1.5e-09 67.0 58 69.0
CiPaw.04G107800 Carya illinoinensis HOM05D007427 ORTHO05D006413 3.4e-09 65.9 66 56.1
Glyma.10G043100 Glycine max HOM05D007427 ORTHO05D006413 3.4e-09 65.9 66 54.5
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 7.6e-09 64.7 63 65.1
CiPaw.04G107700 Carya illinoinensis HOM05D007427 ORTHO05D006413 2.2e-08 63.2 71 52.1
Glyma.13G130600 Glycine max HOM05D007427 ORTHO05D006413 2.2e-08 63.2 52 71.2
QL09p044388 Quercus lobata HOM05D007427 ORTHO05D006413 2.2e-08 63.2 55 61.8
Thecc.01G231600 Theobroma cacao HOM05D007427 ORTHO05D006413 2.2e-08 63.2 64 57.8
CiPaw.03G152700 Carya illinoinensis HOM05D007427 ORTHO05D006413 2.9e-08 62.8 70 57.1
CSS0029156 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 3.8e-08 62.4 60 63.3
CSS0036288 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 3.8e-08 62.4 60 63.3
Nitab4.5_0000813g0050 Nicotiana tabacum HOM05D014142 ORTHO05D006413 3.8e-08 62.4 57 59.6
COL.COLO4_28358 Corchorus olitorius HOM05D007427 ORTHO05D006413 4.9e-08 62.0 64 53.1
Ciclev10022672m.g Citrus clementina HOM05D007427 ORTHO05D006413 6.4e-08 61.6 79 48.1
Lalb_Chr01g0019331 Lupinus albus HOM05D007427 ORTHO05D006413 6.4e-08 61.6 57 54.4
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 6.4e-08 61.6 62 62.9
Duzib138G0919 Durio zibethinus HOM05D007427 ORTHO05D006413 1.4e-07 60.5 81 46.9
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 1.4e-07 60.5 63 61.9
Psat3g049800 Pisum sativum HOM05D007427 ORTHO05D006413 1.4e-07 60.5 63 57.1
Lalb_Chr25g0289621 Lupinus albus HOM05D007427 ORTHO05D006413 1.9e-07 60.1 55 56.4
Nitab4.5_0001657g0050 Nicotiana tabacum HOM05D014142 ORTHO05D006413 1.9e-07 60.1 63 58.7
CANSAT01G2272 Cannabis sativa HOM05D007427 ORTHO05D006413 2.4e-07 59.7 80 48.8
Sabra02G0191700 Salix brachista HOM05D007427 ORTHO05D006413 3.2e-07 59.3 69 47.8
Duzib211G0080 Durio zibethinus HOM05D007427 ORTHO05D006413 7.1e-07 58.2 57 56.1
Phvul.007G156700 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 7.1e-07 58.2 64 54.7
Potri.002G252400 Populus trichocarpa HOM05D007427 ORTHO05D006413 7.1e-07 58.2 63 50.8
Thecc.01G231700 Theobroma cacao HOM05D007427 ORTHO05D006413 9.3e-07 57.8 67 46.3
arahy.Tifrunner.gnm1.ann1.KG3A2Z Arachis hypogaea HOM05D007427 ORTHO05D006413 1.2e-06 57.4 66 54.5
Ca_08774_v3 Cicer arietinum L. HOM05D007427 ORTHO05D006413 1.2e-06 57.4 61 59.0
COL.COLO4_17317 Corchorus olitorius HOM05D007427 ORTHO05D006413 1.2e-06 57.4 59 54.2
Sopen09g025140 Solanum pennellii HOM05D014142 ORTHO05D006413 1.2e-06 57.4 59 59.3
PGSC0003DMG400015809 Solanum tuberosum HOM05D014142 ORTHO05D006413 1.2e-06 57.4 50 58.0
ClCG09G009340 Citrullus lanatus HOM05D007427 ORTHO05D006413 1.6e-06 57.0 65 52.3
Ciclev10022773m.g Citrus clementina HOM05D007427 ORTHO05D006413 1.6e-06 57.0 73 46.6
Cpa.g.sc8.193 Carica papaya HOM05D007427 ORTHO05D006413 2.1e-06 56.6 57 56.1
Rhsim13G0042300 Rhododendron simsii HOM05D007427 ORTHO05D006413 2.1e-06 56.6 63 54.0
Carub.0007s1161 Capsella rubella HOM05D008344 ORTHO05D006413 4.6e-06 55.5 75 49.3
Sed0020523 Sechium edule HOM05D007427 ORTHO05D006413 4.6e-06 55.5 62 53.2
Gohir.A07G154300 Gossypium hirsutum HOM05D007427 ORTHO05D006413 6.0e-06 55.1 71 46.5
Gohir.D07G160600 Gossypium hirsutum HOM05D007427 ORTHO05D006413 6.0e-06 55.1 71 46.5
AL7G23430 Arabidopsis lyrata HOM05D008344 ORTHO05D006413 7.8e-06 54.7 75 50.7
CANSAT01G2831 Cannabis sativa HOM05D007427 ORTHO05D006413 7.8e-06 54.7 52 57.7
MELO3C024163.2 Cucumis melo HOM05D007427 ORTHO05D006413 7.8e-06 54.7 62 50.0
CsaV3_7G025650 Cucumis sativus L. HOM05D007427 ORTHO05D006413 7.8e-06 54.7 62 50.0


User provided reference genes

Program Settings