Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 9.9e-95 350.1 179 100.0
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 7.8e-76 287.3 179 83.8
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 5.3e-32 141.7 180 48.9
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 2.2e-25 119.8 171 43.9
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.8e-24 116.7 164 41.5
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 1.6e-23 113.6 168 42.3
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 5.9e-23 111.7 164 40.2
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 4.2e-21 105.5 169 40.8
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 5.5e-21 105.1 172 40.7
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 7.2e-21 104.8 172 39.5
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 9.4e-21 104.4 170 41.2
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 1.2e-20 104.0 176 43.2
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 1.6e-20 103.6 176 39.8
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 2.1e-20 103.2 168 39.3
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.6e-20 102.4 169 39.1
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 8.0e-20 101.3 161 42.2
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 1.4e-19 100.5 172 40.1
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 1.8e-19 100.1 166 38.0
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 1.8e-19 100.1 175 36.0
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.8e-19 100.1 177 37.3
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 3.0e-19 99.4 175 38.9
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.0e-19 99.4 168 41.1
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.0e-19 99.4 168 41.1
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 4.0e-19 99.0 196 37.8
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 5.2e-19 98.6 171 38.0
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 8.8e-19 97.8 171 37.4
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 8.8e-19 97.8 172 39.5
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 8.8e-19 97.8 162 37.7
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 8.8e-19 97.8 176 39.8
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 1.2e-18 97.4 172 39.5
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 1.2e-18 97.4 155 38.7
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 2.6e-18 96.3 175 36.6
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 2.6e-18 96.3 174 37.4
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 4.4e-18 95.5 174 37.9
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 4.4e-18 95.5 177 36.2
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 4.4e-18 95.5 168 37.5
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 4.4e-18 95.5 144 41.0
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 7.5e-18 94.7 170 38.2
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 7.5e-18 94.7 167 38.9
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 7.5e-18 94.7 171 37.4
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 9.8e-18 94.4 160 37.5
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 1.3e-17 94.0 170 37.6
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.3e-17 94.0 148 41.2
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 1.7e-17 93.6 162 40.7
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 2.2e-17 93.2 168 35.7
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 2.2e-17 93.2 173 37.0
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 2.8e-17 92.8 168 38.1
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 2.8e-17 92.8 175 36.6
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 3.7e-17 92.4 172 36.0
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 4.8e-17 92.0 173 40.5
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 4.8e-17 92.0 168 39.3
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 4.8e-17 92.0 168 38.1
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 4.8e-17 92.0 177 34.5
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 4.8e-17 92.0 169 36.1
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 6.3e-17 91.7 172 37.8
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 6.3e-17 91.7 185 37.3
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 6.3e-17 91.7 161 40.4
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 1.1e-16 90.9 162 36.4
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 1.1e-16 90.9 175 36.6
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 1.4e-16 90.5 171 36.8
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 1.4e-16 90.5 170 38.2
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 3.1e-16 89.4 165 37.0
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 4.1e-16 89.0 169 36.1
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 4.1e-16 89.0 159 35.8
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 5.4e-16 88.6 160 33.8
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 5.4e-16 88.6 167 35.3
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 7.0e-16 88.2 164 37.2
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 9.1e-16 87.8 172 34.3
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 9.1e-16 87.8 166 36.1
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 1.2e-15 87.4 173 33.5
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 1.2e-15 87.4 167 32.9
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 1.6e-15 87.0 148 39.2
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 1.6e-15 87.0 167 35.3
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 1.6e-15 87.0 167 35.3
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 1.6e-15 87.0 175 34.9
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 2.0e-15 86.7 168 34.5
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 2.7e-15 86.3 148 39.2
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 2.7e-15 86.3 165 36.4
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 2.7e-15 86.3 155 36.8
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 3.5e-15 85.9 176 35.8
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.5e-15 85.9 172 36.6
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 3.5e-15 85.9 167 33.5
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 3.5e-15 85.9 175 36.0
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 5.9e-15 85.1 168 35.7
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 7.7e-15 84.7 168 36.3
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 7.7e-15 84.7 170 35.3
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 1.0e-14 84.3 154 35.7
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 1.0e-14 84.3 167 32.3
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 1.3e-14 84.0 150 36.7
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 2.9e-14 82.8 171 34.5
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.9e-14 82.8 163 39.3
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 3.8e-14 82.4 147 39.5
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 3.8e-14 82.4 174 35.6
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 3.8e-14 82.4 161 37.9
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 3.8e-14 82.4 166 34.9
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.8e-14 82.4 163 39.3
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.8e-14 82.4 163 39.3
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 3.8e-14 82.4 163 39.3
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 3.8e-14 82.4 164 31.7
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 5.0e-14 82.0 161 37.9
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 5.0e-14 82.0 167 34.1
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 6.5e-14 81.6 161 37.9
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 8.5e-14 81.3 163 38.7
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.5e-13 80.5 172 34.3
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 1.9e-13 80.1 159 35.8
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 2.5e-13 79.7 148 36.5
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 2.5e-13 79.7 148 36.5
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.5e-13 79.7 164 34.8
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 3.2e-13 79.3 132 39.4
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 3.2e-13 79.3 171 33.9
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 4.2e-13 79.0 170 34.1
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.2e-12 77.4 166 35.5
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 1.2e-12 77.4 153 35.3
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 1.6e-12 77.0 159 34.6
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.1e-12 76.6 153 35.3
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.7e-12 76.3 153 35.3
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 3.6e-12 75.9 170 31.8
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 1.0e-11 74.3 140 35.0
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 1.0e-11 74.3 167 31.7
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 1.0e-11 74.3 189 27.5
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 1.4e-11 73.9 174 32.2
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 1.4e-11 73.9 145 34.5
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 1.4e-11 73.9 145 34.5
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 1.8e-11 73.6 161 34.8
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 3.0e-11 72.8 164 31.1
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 5.2e-11 72.0 147 33.3
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 5.2e-11 72.0 164 31.1
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 2.6e-10 69.7 87 43.7
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 2.6e-10 69.7 87 43.7
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 4.4e-10 68.9 162 33.3
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 2.2e-09 66.6 107 39.3
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 2.2e-09 66.6 133 35.3
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 1.8e-08 63.5 122 37.7
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 9.1e-08 61.2 140 31.4
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 5.9e-07 58.5 145 31.0
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 2.3e-06 56.6 105 40.0


User provided reference genes

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