Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1102300 Malus domestica HOM05D005645 ORTHO05D007156 1.2e-57 226.1 99 100.0
MD11G1310800 Malus domestica HOM05D005645 ORTHO05D007156 4.5e-49 197.6 98 88.8
Prupe.8G260500 Prunus persica HOM05D005645 ORTHO05D007156 1.0e-48 196.4 98 86.7
MD03G1287400 Malus domestica HOM05D005645 ORTHO05D007156 1.7e-48 195.7 98 87.8
Actinidia21051 Actinidia chinensis HOM05D005645 ORTHO05D007156 4.2e-47 191.0 98 83.7
COL.COLO4_23354 Corchorus olitorius HOM05D005645 ORTHO05D007156 5.5e-47 190.7 98 84.7
Dinv33051 Davidia involucrata HOM05D005645 ORTHO05D007156 9.4e-47 189.9 98 83.7
Hma1.2p1_0491F.1_g164480 Hydrangea macrophylla HOM05D005645 ORTHO05D007156 1.2e-46 189.5 98 83.7
ClCG10G010870 Citrullus lanatus HOM05D005645 ORTHO05D007156 1.6e-46 189.1 98 83.7
MELO3C017961.2 Cucumis melo HOM05D005645 ORTHO05D007156 1.6e-46 189.1 98 83.7
CsaV3_4G000750 Cucumis sativus L. HOM05D005645 ORTHO05D007156 1.6e-46 189.1 98 83.7
CSS0005125 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 2.1e-46 188.7 98 82.7
RcHm_v2.0_Chr6g0293871 Rosa chinensis HOM05D005645 ORTHO05D007156 2.1e-46 188.7 98 80.6
Dinv19699 Davidia involucrata HOM05D005645 ORTHO05D007156 3.6e-46 188.0 98 81.6
Duzib138G1290 Durio zibethinus HOM05D005645 ORTHO05D007156 4.7e-46 187.6 98 82.7
Gohir.A08G075600 Gossypium hirsutum HOM05D005645 ORTHO05D007156 6.1e-46 187.2 98 81.6
Gohir.D08G085100 Gossypium hirsutum HOM05D005645 ORTHO05D007156 6.1e-46 187.2 98 81.6
GSVIVG01028000001 Vitis vinifera HOM05D005645 ORTHO05D007156 8.0e-46 186.8 98 80.6
Gorai.008G145600 Gossypium raimondii HOM05D005645 ORTHO05D007156 1.4e-45 186.0 98 79.6
Thecc.01G299500 Theobroma cacao HOM05D005645 ORTHO05D007156 1.4e-45 186.0 98 81.6
Atru.chr5.1154 Acer truncatum HOM05D005645 ORTHO05D007156 1.8e-45 185.7 98 80.6
Duzib133G0671 Durio zibethinus HOM05D005645 ORTHO05D007156 1.8e-45 185.7 98 80.6
Aqoxy2G02954 Aquilegia oxysepala HOM05D005645 ORTHO05D007156 3.0e-45 184.9 98 81.6
Ciclev10021114m.g Citrus clementina HOM05D005645 ORTHO05D007156 3.0e-45 184.9 98 80.6
Gorai.004G089600 Gossypium raimondii HOM05D005645 ORTHO05D007156 4.0e-45 184.5 98 80.6
Sed0014780 Sechium edule HOM05D005645 ORTHO05D007156 4.0e-45 184.5 98 80.6
PGR119G1100 Punica granatum HOM05D005645 ORTHO05D007156 5.2e-45 184.1 98 79.6
Lj2P1193T28 Lonicera japonica HOM05D005645 ORTHO05D007156 6.8e-45 183.7 98 79.6
Cc01_g20770 Coffea canephora HOM05D005645 ORTHO05D007156 8.8e-45 183.3 98 79.6
Eucgr.H01116 Eucalyptus grandis HOM05D005645 ORTHO05D007156 8.8e-45 183.3 98 77.6
Gohir.A12G130800 Gossypium hirsutum HOM05D005645 ORTHO05D007156 8.8e-45 183.3 98 78.6
Peaxi162Scf00001g00452 Petunia axillaris HOM05D005645 ORTHO05D007156 1.2e-44 183.0 98 79.6
Duzib211G0390 Durio zibethinus HOM05D005645 ORTHO05D007156 2.0e-44 182.2 98 79.6
PGSC0003DMG400011401 Solanum tuberosum HOM05D005645 ORTHO05D007156 2.0e-44 182.2 98 78.6
CAN.G1628.1 Capsicum annuum HOM05D005645 ORTHO05D007156 2.6e-44 181.8 98 78.6
Sopen09g029900 Solanum pennellii HOM05D005645 ORTHO05D007156 2.6e-44 181.8 98 78.6
Manes.05G062500 Manihot esculenta HOM05D005645 ORTHO05D007156 3.4e-44 181.4 98 79.6
Oeu011455.1 Olea europaea HOM05D005645 ORTHO05D007156 5.7e-44 180.6 98 79.6
Rhsim01G0284600 Rhododendron simsii HOM05D005645 ORTHO05D007156 7.5e-44 180.3 98 77.6
CANSAT25G0541 Cannabis sativa HOM05D005645 ORTHO05D007156 1.3e-43 179.5 98 79.6
Nitab4.5_0001879g0020 Nicotiana tabacum HOM05D005645 ORTHO05D007156 1.3e-43 179.5 98 77.6
MBI19_g25350_MAGBIO Magnolia biondii HOM05D005645 ORTHO05D007156 2.2e-43 178.7 98 76.5
Cpa.g.c27813 Carica papaya HOM05D005645 ORTHO05D007156 4.8e-43 177.6 98 74.5
Cfa005921 Carpinus fangiana HOM05D005645 ORTHO05D007156 4.8e-43 177.6 98 77.6
DCAR_002826 Daucus carota HOM05D005645 ORTHO05D007156 4.8e-43 177.6 98 77.6
Nitab4.5_0008207g0010 Nicotiana tabacum HOM05D005645 ORTHO05D007156 6.3e-43 177.2 98 76.5
Solyc09g075080.3 Solanum lycopersicum HOM05D005645 ORTHO05D007156 6.3e-43 177.2 98 78.6
Migut.D00211 Erythranthe guttata HOM05D005645 ORTHO05D007156 8.3e-43 176.8 98 73.5
PSO210G7211 Papaver somniferum HOM05D005645 ORTHO05D007156 8.3e-43 176.8 98 78.6
CiPaw.08G095700 Carya illinoinensis HOM05D005645 ORTHO05D007156 1.4e-42 176.0 98 74.5
FvH4_2g25611 Fragaria vesca HOM05D005645 ORTHO05D007156 1.4e-42 176.0 98 74.5
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.4e-42 176.0 98 74.5
PSO170G2082 Papaver somniferum HOM05D005645 ORTHO05D007156 1.4e-42 176.0 98 78.6
TAR365G0052 Trochodendron aralioides HOM05D005645 ORTHO05D007156 1.8e-42 175.6 98 76.5
EL10Ac7g17501 Beta vulgaris HOM05D005645 ORTHO05D007156 2.4e-42 175.3 98 75.5
CDE11G0431 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 2.4e-42 175.3 98 76.5
FAN27G1772 Fragaria x ananassa HOM05D005645 ORTHO05D007156 2.4e-42 175.3 98 74.5
Nn4g25798 Nelumbo nucifera HOM05D005645 ORTHO05D007156 2.4e-42 175.3 98 77.6
TAR370G0004 Trochodendron aralioides HOM05D005645 ORTHO05D007156 2.4e-42 175.3 98 76.5
Carub.0006s3469 Capsella rubella HOM05D005645 ORTHO05D007156 4.1e-42 174.5 99 75.8
AT4G02440 Arabidopsis thaliana HOM05D005645 ORTHO05D007156 7.0e-42 173.7 99 75.8
Lsat_1_v5_gn_5_191140 Lactuca sativa HOM05D005645 ORTHO05D007156 7.0e-42 173.7 98 74.5
Sed0022873 Sechium edule HOM05D005645 ORTHO05D007156 7.0e-42 173.7 98 75.5
THA.LOC109115977 Tarenaya hassleriana HOM05D005645 ORTHO05D007156 7.0e-42 173.7 98 74.5
Sabra02G0154200 Salix brachista HOM05D005645 ORTHO05D007156 1.2e-41 172.9 98 76.5
SGA_v2.0_scaffold1G00372 Striga asiatica HOM05D005645 ORTHO05D007156 1.2e-41 172.9 98 73.5
AUR62008638 Chenopodium quinoa HOM05D005645 ORTHO05D007156 1.6e-41 172.6 98 74.5
Potri.014G130000 Populus trichocarpa HOM05D005645 ORTHO05D007156 1.6e-41 172.6 98 75.5
Sp6g02350 Schrenkiella parvula HOM05D005645 ORTHO05D007156 1.6e-41 172.6 99 74.7
Potri.002G205150 Populus trichocarpa HOM05D005645 ORTHO05D007156 2.0e-41 172.2 98 75.5
FAN15G1997 Fragaria x ananassa HOM05D005645 ORTHO05D007156 2.7e-41 171.8 98 74.5
AL6G50630 Arabidopsis lyrata HOM05D005645 ORTHO05D007156 4.5e-41 171.0 100 76.0
Sabra14G0096600 Salix brachista HOM05D005645 ORTHO05D007156 4.5e-41 171.0 98 74.5
HanXRQChr04g0118021 Helianthus annuus HOM05D005645 ORTHO05D007156 5.9e-41 170.6 97 75.3
TWI23G0499 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 5.9e-41 170.6 99 73.7
Lsat_1_v5_gn_8_53521 Lactuca sativa HOM05D005645 ORTHO05D007156 1.0e-40 169.9 97 75.3
QL12p028562 Quercus lobata HOM05D005645 ORTHO05D007156 1.3e-40 169.5 99 72.7
Lj1g0011611 Lotus japonicus HOM05D005645 ORTHO05D007156 1.7e-40 169.1 98 71.4
AUR62033135 Chenopodium quinoa HOM05D005645 ORTHO05D007156 2.3e-40 168.7 98 72.4
Aa31LG5G2090 Aethionema arabicum HOM05D005645 ORTHO05D007156 2.9e-40 168.3 99 73.7
CARHR250710 Cardamine hirsuta HOM05D005645 ORTHO05D007156 2.9e-40 168.3 99 73.7
SalBow3G0280 Salvia bowleyana HOM05D005645 ORTHO05D007156 2.9e-40 168.3 98 75.5
SGA_v2.0_scaffold2G01399 Striga asiatica HOM05D005645 ORTHO05D007156 5.0e-40 167.5 98 72.4
CiPaw.07G108000 Carya illinoinensis HOM05D005645 ORTHO05D007156 6.5e-40 167.2 98 71.4
Migut.N01502 Erythranthe guttata HOM05D005645 ORTHO05D007156 8.6e-40 166.8 98 72.4
BcaB01g02041 Brassica carinata HOM05D005645 ORTHO05D007156 1.1e-39 166.4 100 72.0
BcaNung05002 Brassica carinata HOM05D005645 ORTHO05D007156 1.1e-39 166.4 100 72.0
CSS0029794 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 1.9e-39 165.6 98 74.5
ECA236G0211 Erigeron canadensis HOM05D005645 ORTHO05D007156 1.9e-39 165.6 97 73.2
CAN.G339.1 Capsicum annuum HOM05D005645 ORTHO05D007156 5.5e-39 164.1 98 73.5
BraA09t35841Z Brassica rapa HOM05D005645 ORTHO05D007156 1.2e-38 162.9 101 70.3
ATR0796G303 Amborella trichopoda HOM05D005645 ORTHO05D007156 1.6e-38 162.5 98 70.4
DCAR_018339 Daucus carota HOM05D005645 ORTHO05D007156 1.6e-38 162.5 98 68.4
HPP92_025206 Vanilla planifolia HOM05D005645 ORTHO05D007156 2.8e-38 161.8 98 67.3
A09p01900 Brassica napus HOM05D005645 ORTHO05D007156 6.1e-38 160.6 101 69.3
Lalb_Chr18g0047021 Lupinus albus HOM05D005645 ORTHO05D007156 6.1e-38 160.6 98 67.3
Phvul.001G207000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 1.0e-37 159.8 98 68.4
VMungo1383G2661 Vigna mungo HOM05D005645 ORTHO05D007156 1.0e-37 159.8 98 67.3
C09p01980 Brassica napus HOM05D005645 ORTHO05D007156 1.4e-37 159.5 101 69.3
SHI29059 Sapria himalayana HOM05D005645 ORTHO05D007156 1.4e-37 159.5 98 72.4
Medtr7g108820 Medicago truncatula HOM05D005645 ORTHO05D007156 1.8e-37 159.1 99 67.7
Medtr8g058520 Medicago truncatula HOM05D005645 ORTHO05D007156 1.8e-37 159.1 99 67.7
arahy.Tifrunner.gnm1.ann1.LF73V2 Arachis hypogaea HOM05D005645 ORTHO05D007156 3.0e-37 158.3 98 68.4
BcaNung04054 Brassica carinata HOM05D005645 ORTHO05D007156 3.0e-37 158.3 101 68.3
Sc09g0004020 Simmondsia chinensis HOM05D005645 ORTHO05D007156 3.0e-37 158.3 98 70.4
Ca_09155_v3 Cicer arietinum L. HOM05D005645 ORTHO05D007156 6.8e-37 157.1 99 64.6
TPR.G9640 Trifolium pratense HOM05D005645 ORTHO05D007156 6.8e-37 157.1 99 65.7
Nn3g21470 Nelumbo nucifera HOM05D005645 ORTHO05D007156 3.4e-36 154.8 87 74.7
BolC9t53130H Brassica oleracea HOM05D005645 ORTHO05D007156 7.5e-36 153.7 101 68.3
Glyma.03G214300 Glycine max HOM05D005645 ORTHO05D007156 7.5e-36 153.7 98 63.3
Lalb_Chr06g0163461 Lupinus albus HOM05D005645 ORTHO05D007156 1.7e-35 152.5 100 66.0
Psat3g022200 Pisum sativum HOM05D005645 ORTHO05D007156 3.7e-35 151.4 99 62.6
VMungo0720G2164 Vigna mungo HOM05D005645 ORTHO05D007156 1.2e-33 146.4 98 62.2
Mapoly0034s0045 Marchantia polymorpha HOM05D005645 ORTHO05D007156 2.0e-33 145.6 98 62.2
SEGI_05916 Sequoiadendron giganteum HOM05D005645 ORTHO05D007156 4.5e-33 144.4 98 64.3
arahy.Tifrunner.gnm1.ann1.G1675E Arachis hypogaea HOM05D005645 ORTHO05D007156 7.8e-33 143.7 102 59.8
arahy.Tifrunner.gnm1.ann1.UILT17 Arachis hypogaea HOM05D005645 ORTHO05D007156 7.8e-33 143.7 102 59.8
Zm00001eb346660 Zea mays HOM05D005645 ORTHO05D007156 1.7e-32 142.5 98 61.2
Phvul.007G146000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 3.8e-32 141.4 98 60.2
Os05g0365000 Oryza sativa ssp. japonica HOM05D005645 ORTHO05D007156 5.0e-32 141.0 98 60.2
Glyma.02G018450 Glycine max HOM05D005645 ORTHO05D007156 8.6e-32 140.2 98 61.2
AagrBONN_evm.TU.Sc2ySwM_228.5415 Anthoceros agrestis HOM05D005645 ORTHO05D007156 5.6e-31 137.5 98 59.2
SMO331G0040 Selaginella moellendorffii HOM05D005645 ORTHO05D007156 4.0e-29 131.3 97 60.8
Pp3c4_3650 Physcomitrium patens HOM05D005645 ORTHO05D007156 8.9e-29 130.2 98 58.2
HPP92_018255 Vanilla planifolia HOM05D005645 ORTHO05D007156 3.7e-27 124.8 97 54.6
Pp3c12_6520 Physcomitrium patens HOM05D005645 ORTHO05D007156 3.2e-26 121.7 98 54.1
Actinidia24827 Actinidia chinensis HOM05D005645 ORTHO05D007156 4.1e-26 121.3 63 81.0
AagrBONN_evm.TU.Sc2ySwM_117.1647 Anthoceros agrestis HOM05D005645 ORTHO05D007156 1.6e-14 82.8 67 53.7
Oeu046686.1 Olea europaea HOM05D005645 ORTHO05D007156 5.8e-12 74.3 48 70.8
TWI59G0946 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 7.1e-10 67.4 46 63.0


User provided reference genes

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