Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 4.6e-80 301.2 156 100.0
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 6.0e-72 274.2 156 91.0
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 7.8e-72 273.9 156 91.7
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 3.6e-69 265.0 156 89.7
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 1.4e-68 263.1 154 89.0
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 9.9e-67 256.9 156 84.6
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 6.4e-66 254.2 156 84.0
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 6.4e-66 254.2 156 84.0
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 6.4e-66 254.2 156 84.0
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 5.4e-65 251.1 156 83.3
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 1.2e-64 250.0 156 84.6
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 1.7e-63 246.1 156 82.1
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 5.1e-63 244.6 152 82.9
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 6.6e-63 244.2 157 80.9
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 1.1e-62 243.4 156 81.4
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 1.1e-62 243.4 156 82.1
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 2.5e-62 242.3 152 82.9
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 4.3e-62 241.5 144 86.1
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 1.3e-61 240.0 156 80.1
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 2.1e-61 239.2 150 83.3
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 2.8e-61 238.8 156 80.1
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 8.1e-61 237.3 156 78.8
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 1.1e-60 236.9 144 84.7
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 1.1e-60 236.9 155 80.0
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 1.8e-60 236.1 156 78.8
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 4.0e-60 235.0 158 80.4
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 5.3e-60 234.6 157 79.6
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 3.4e-59 231.9 156 78.8
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 3.4e-59 231.9 156 78.8
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 4.5e-59 231.5 156 75.6
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 5.8e-59 231.1 156 82.7
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 7.6e-59 230.7 156 78.2
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 1.7e-58 229.6 156 77.6
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 3.8e-58 228.4 156 81.4
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 6.4e-58 227.6 156 75.6
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 8.4e-58 227.3 156 76.3
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 3.2e-57 225.3 158 75.9
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 4.2e-57 224.9 156 75.6
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 5.4e-57 224.6 156 73.7
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 7.1e-57 224.2 156 78.8
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 7.1e-57 224.2 157 79.6
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 7.1e-57 224.2 157 75.8
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 9.3e-57 223.8 157 79.6
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 9.3e-57 223.8 156 78.8
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 1.2e-56 223.4 156 78.2
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 1.2e-56 223.4 156 74.4
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 1.2e-56 223.4 156 77.6
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.6e-56 223.0 156 76.3
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 1.6e-56 223.0 157 78.3
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 1.6e-56 223.0 157 74.5
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.1e-56 222.6 157 75.2
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 2.1e-56 222.6 156 73.1
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 2.1e-56 222.6 157 74.5
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 2.1e-56 222.6 158 77.2
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 2.1e-56 222.6 156 76.3
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.7e-56 222.2 130 86.2
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 2.7e-56 222.2 144 79.9
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 4.6e-56 221.5 148 79.7
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 5.1e-55 218.0 156 76.3
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 6.7e-55 217.6 156 71.8
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 1.5e-54 216.5 157 73.9
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 2.5e-54 215.7 157 74.5
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 5.6e-54 214.5 157 73.2
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 7.4e-54 214.2 126 86.5
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 9.6e-54 213.8 161 72.0
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 9.6e-54 213.8 129 85.3
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 1.3e-53 213.4 156 71.8
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 2.1e-53 212.6 150 74.7
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.1e-52 210.3 118 90.7
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 1.1e-52 210.3 164 71.3
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 4.0e-52 208.4 157 73.2
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 6.9e-52 207.6 158 74.1
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 9.0e-52 207.2 158 74.1
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 1.5e-51 206.5 134 76.9
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 3.4e-51 205.3 158 73.4
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 5.8e-51 204.5 160 73.8
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 9.9e-51 203.8 158 72.8
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 9.9e-51 203.8 158 72.8
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 9.9e-51 203.8 159 72.3
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 1.3e-50 203.4 157 71.3
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 1.7e-50 203.0 159 71.1
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 1.7e-50 203.0 159 73.6
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 1.7e-50 203.0 157 72.6
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 2.2e-50 202.6 156 69.9
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 2.9e-50 202.2 158 72.8
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 3.8e-50 201.8 116 86.2
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 4.2e-49 198.4 127 80.3
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 9.3e-49 197.2 130 80.8
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 1.6e-48 196.4 114 91.2
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 1.6e-48 196.4 160 70.0
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 3.9e-47 191.8 165 67.3
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 5.3e-44 181.4 143 69.9
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 2.0e-43 179.5 127 72.4
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 3.4e-43 178.7 128 75.8
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 4.5e-43 178.3 127 73.2
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 5.8e-43 177.9 116 79.3
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 1.0e-42 177.2 127 76.4
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 2.2e-42 176.0 156 62.2
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 7.9e-40 167.5 119 74.8
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 2.3e-39 166.0 107 73.8
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 5.1e-39 164.9 129 65.9
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 5.1e-39 164.9 128 65.6
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.6e-37 159.8 140 61.4
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 1.6e-37 159.8 107 78.5
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 2.2e-37 159.5 104 74.0
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 2.8e-37 159.1 138 62.3
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 1.8e-36 156.4 128 63.3
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 3.0e-31 139.0 92 76.1
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 6.1e-16 88.2 64 76.6
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.3e-13 80.5 74 54.1
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 3.1e-12 75.9 120 40.8
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 5.2e-07 58.5 107 36.4


User provided reference genes

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