Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1071300 Malus domestica HOM05D000279 ORTHO05D022650 8.2e-79 297.0 149 100.0
FvH4_2g07800 Fragaria vesca HOM05D000279 ORTHO05D022650 5.8e-40 167.9 141 61.7
FAN24G1790 Fragaria x ananassa HOM05D000279 ORTHO05D022650 5.8e-40 167.9 141 61.7
FAN24G1298 Fragaria x ananassa HOM05D000279 ORTHO05D022650 1.3e-39 166.8 141 61.7
FvH4_2g07801 Fragaria vesca HOM05D000279 ORTHO05D022650 7.1e-22 107.8 78 64.1
FAN20G2709 Fragaria x ananassa HOM05D000279 ORTHO05D022650 3.0e-20 102.4 99 51.5
RcHm_v2.0_Chr1g0330031 Rosa chinensis HOM05D000279 ORTHO05D000498 1.1e-09 67.4 124 38.7
Medtr8g011730 Medicago truncatula HOM05D000279 ORTHO05D000498 3.1e-09 65.9 108 34.3
Prupe.2G052500 Prunus persica HOM05D000279 ORTHO05D000498 3.1e-09 65.9 113 34.5
Lj1g0010305 Lotus japonicus HOM05D006729 ORTHO05D008502 6.9e-09 64.7 115 35.7
Lj6g0009337 Lotus japonicus HOM05D000279 ORTHO05D000498 9.0e-09 64.3 110 36.4
Glyma.19G203800 Glycine max HOM05D000279 ORTHO05D000498 1.2e-08 63.9 133 32.3
Medtr2g034780 Medicago truncatula HOM05D000279 ORTHO05D034589 1.5e-08 63.5 106 35.8
Lj6g0016290 Lotus japonicus HOM05D000279 ORTHO05D000498 2.0e-08 63.2 98 38.8
Phvul.010G098000 Phaseolus vulgaris HOM05D000279 ORTHO05D000498 2.6e-08 62.8 106 35.8
Prupe.2G052600 Prunus persica HOM05D000279 ORTHO05D000498 2.6e-08 62.8 110 35.5
Lj5g0001153 Lotus japonicus HOM05D000279 ORTHO05D000498 3.4e-08 62.4 106 34.9
Phvul.010G097900 Phaseolus vulgaris HOM05D000279 ORTHO05D000498 3.4e-08 62.4 92 38.0
Lj5g0022331 Lotus japonicus HOM05D000279 ORTHO05D000498 5.8e-08 61.6 106 34.9
Lj6g0007434 Lotus japonicus HOM05D000279 ORTHO05D000498 5.8e-08 61.6 120 35.0
Psat3g026640 Pisum sativum HOM05D000279 ORTHO05D000498 5.8e-08 61.6 131 35.1
TPR.G32309 Trifolium pratense HOM05D000279 ORTHO05D000498 7.6e-08 61.2 123 30.9
VMungo0720G0446 Vigna mungo HOM05D000279 ORTHO05D000498 9.9e-08 60.8 138 32.6
TPR.G438 Trifolium pratense HOM05D000279 ORTHO05D000498 1.3e-07 60.5 113 34.5
VMungo0499G0001 Vigna mungo HOM05D000279 ORTHO05D000498 1.3e-07 60.5 141 30.5
Lalb_Chr25g0287761 Lupinus albus HOM05D000279 ORTHO05D000498 1.7e-07 60.1 107 34.6
RcHm_v2.0_Chr1g0330011 Rosa chinensis HOM05D000279 ORTHO05D000498 1.7e-07 60.1 120 35.0
arahy.Tifrunner.gnm1.ann1.8CWC6D Arachis hypogaea HOM05D000279 ORTHO05D000498 2.2e-07 59.7 131 29.8
FAN06G1689 Fragaria x ananassa HOM05D000279 ORTHO05D000498 2.9e-07 59.3 113 38.1
Lalb_Chr01g0017671 Lupinus albus HOM05D000279 ORTHO05D000498 2.9e-07 59.3 119 34.5
Medtr7g107200 Medicago truncatula HOM05D000279 ORTHO05D000498 3.8e-07 58.9 113 32.7
Psat3g026320 Pisum sativum HOM05D000279 ORTHO05D000498 3.8e-07 58.9 108 34.3
RcHm_v2.0_Chr5g0041511 Rosa chinensis HOM05D000279 ORTHO05D000498 3.8e-07 58.9 123 28.5
TPR.G32291 Trifolium pratense HOM05D000279 ORTHO05D000498 3.8e-07 58.9 120 30.8
TPR.G40804 Trifolium pratense HOM05D000279 ORTHO05D000498 3.8e-07 58.9 116 32.8
MD02G1268100 Malus domestica HOM05D000279 ORTHO05D000498 4.9e-07 58.5 107 35.5
Prupe.2G052700 Prunus persica HOM05D000279 ORTHO05D000498 6.4e-07 58.2 117 32.5
arahy.Tifrunner.gnm1.ann1.ETPV4R Arachis hypogaea HOM05D000279 ORTHO05D000498 8.4e-07 57.8 81 37.0
Lj5g0012225 Lotus japonicus HOM05D000279 ORTHO05D000498 8.4e-07 57.8 122 33.6
MD07G1051300 Malus domestica HOM05D000279 ORTHO05D000498 8.4e-07 57.8 110 32.7
Phvul.001G199800 Phaseolus vulgaris HOM05D000279 ORTHO05D000498 8.4e-07 57.8 128 32.0
MD03G1193600 Malus domestica HOM05D000279 ORTHO05D000498 1.1e-06 57.4 109 32.1
VMungo1383G2970 Vigna mungo HOM05D000279 ORTHO05D000498 1.1e-06 57.4 128 30.5
arahy.Tifrunner.gnm1.ann1.EVN2AK Arachis hypogaea HOM05D000279 ORTHO05D000498 1.4e-06 57.0 101 33.7
arahy.Tifrunner.gnm1.ann1.JJX8CS Arachis hypogaea HOM05D000279 ORTHO05D000498 1.4e-06 57.0 88 38.6
Glyma.18G076700 Glycine max HOM05D000279 ORTHO05D000498 1.4e-06 57.0 118 34.7
Psat3g026480 Pisum sativum HOM05D000279 ORTHO05D000498 1.4e-06 57.0 114 35.1
Prupe.2G052800 Prunus persica HOM05D000279 ORTHO05D000498 1.4e-06 57.0 117 32.5
arahy.Tifrunner.gnm1.ann1.BUD6J0 Arachis hypogaea HOM05D000279 ORTHO05D000498 1.9e-06 56.6 95 34.7
arahy.Tifrunner.gnm1.ann1.HDRR2R Arachis hypogaea HOM05D000279 ORTHO05D000498 1.9e-06 56.6 115 35.7
FvH4_7g04770 Fragaria vesca HOM05D000279 ORTHO05D000498 1.9e-06 56.6 106 31.1
Lj5g0003132 Lotus japonicus HOM05D000279 ORTHO05D000498 1.9e-06 56.6 122 33.6
MD02G1268400 Malus domestica HOM05D000279 ORTHO05D000498 1.9e-06 56.6 110 31.8
Psat0s1122g0160 Pisum sativum HOM05D000279 ORTHO05D000498 1.9e-06 56.6 103 33.0
TPR.G9127 Trifolium pratense HOM05D000279 ORTHO05D000498 1.9e-06 56.6 121 32.2
Phvul.007G264500 Phaseolus vulgaris HOM05D000279 ORTHO05D000498 2.4e-06 56.2 128 28.9
RcHm_v2.0_Chr1g0330181 Rosa chinensis HOM05D000279 ORTHO05D000498 2.4e-06 56.2 117 35.0
RcHm_v2.0_Chr1g0330191 Rosa chinensis HOM05D000279 ORTHO05D000498 2.4e-06 56.2 123 34.1
FAN06G0166 Fragaria x ananassa HOM05D000279 ORTHO05D000498 3.2e-06 55.8 108 36.1
Psat0s1122g0200 Pisum sativum HOM05D000279 ORTHO05D000498 3.2e-06 55.8 102 31.4
RcHm_v2.0_Chr1g0330121 Rosa chinensis HOM05D000279 ORTHO05D000498 3.2e-06 55.8 112 34.8
RcHm_v2.0_Chr1g0330141 Rosa chinensis HOM05D000279 ORTHO05D000498 3.2e-06 55.8 123 33.3
VMungo0582G0001 Vigna mungo HOM05D000279 ORTHO05D000498 3.2e-06 55.8 132 31.8
arahy.Tifrunner.gnm1.ann1.CJXR2J Arachis hypogaea HOM05D000279 ORTHO05D000498 4.2e-06 55.5 92 33.7
arahy.Tifrunner.gnm1.ann1.CQA1YI Arachis hypogaea HOM05D000279 ORTHO05D000498 4.2e-06 55.5 81 37.0
RcHm_v2.0_Chr1g0330151 Rosa chinensis HOM05D000279 ORTHO05D000498 4.2e-06 55.5 123 32.5
RcHm_v2.0_Chr1g0330201 Rosa chinensis HOM05D000279 ORTHO05D000498 4.2e-06 55.5 106 30.2
VMungo0720G2242 Vigna mungo HOM05D000279 ORTHO05D000498 4.2e-06 55.5 123 32.5
arahy.Tifrunner.gnm1.ann1.K7B5IG Arachis hypogaea HOM05D000279 ORTHO05D000498 5.5e-06 55.1 118 28.0
arahy.Tifrunner.gnm1.ann1.MD06FS Arachis hypogaea HOM05D000279 ORTHO05D000498 5.5e-06 55.1 112 35.7
Ca_09094_v3 Cicer arietinum L. HOM05D000279 ORTHO05D000498 5.5e-06 55.1 122 32.0
FvH4_7g04760 Fragaria vesca HOM05D000279 ORTHO05D000498 5.5e-06 55.1 130 31.5
FAN03G1959 Fragaria x ananassa HOM05D000279 ORTHO05D000498 5.5e-06 55.1 108 35.2
FAN06G1972 Fragaria x ananassa HOM05D000279 ORTHO05D000498 5.5e-06 55.1 130 31.5
MD11G1209800 Malus domestica HOM05D000279 ORTHO05D000498 5.5e-06 55.1 81 37.0
Phvul.007G264600 Phaseolus vulgaris HOM05D000279 ORTHO05D000498 5.5e-06 55.1 125 28.8
Prupe.2G052900 Prunus persica HOM05D000279 ORTHO05D000498 5.5e-06 55.1 117 31.6
RcHm_v2.0_Chr6g0252621 Rosa chinensis HOM05D000366 ORTHO05D000437 5.5e-06 55.1 105 35.2
arahy.Tifrunner.gnm1.ann1.TBP304 Arachis hypogaea HOM05D000279 ORTHO05D000498 7.1e-06 54.7 95 33.7
Ca_09092_v3 Cicer arietinum L. HOM05D000279 ORTHO05D000498 7.1e-06 54.7 114 29.8
FvH4_7g04741 Fragaria vesca HOM05D000279 ORTHO05D000498 7.1e-06 54.7 108 35.2
FAN01G2354 Fragaria x ananassa HOM05D000279 ORTHO05D000498 7.1e-06 54.7 108 35.2
FAN06G2560 Fragaria x ananassa HOM05D000279 ORTHO05D000498 7.1e-06 54.7 108 35.2
FAN10G0926 Fragaria x ananassa HOM05D000279 ORTHO05D000498 7.1e-06 54.7 68 41.2
Glyma.03G206100 Glycine max HOM05D000279 ORTHO05D000498 7.1e-06 54.7 128 29.7
Lalb_Chr02g0154011 Lupinus albus HOM05D000279 ORTHO05D000498 7.1e-06 54.7 78 37.2
MD02G1267800 Malus domestica HOM05D000279 ORTHO05D000498 7.1e-06 54.7 71 40.8
Psat0s1123g0040 Pisum sativum HOM05D000279 ORTHO05D000498 7.1e-06 54.7 103 29.1
arahy.Tifrunner.gnm1.ann1.8ZY77E Arachis hypogaea HOM05D000279 ORTHO05D000498 9.3e-06 54.3 106 32.1
FAN03G1745 Fragaria x ananassa HOM05D000279 ORTHO05D000498 9.3e-06 54.3 53 50.9
Lj5g0005924 Lotus japonicus HOM05D000279 ORTHO05D000498 9.3e-06 54.3 108 32.4
Prupe.2G054900 Prunus persica HOM05D000279 ORTHO05D000498 9.3e-06 54.3 132 31.8
VMungo0720G2728 Vigna mungo HOM05D000279 ORTHO05D000498 9.3e-06 54.3 136 33.8


User provided reference genes

Program Settings