Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 1.1e-104 383.3 190 100.0
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 2.4e-91 339.0 190 90.5
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 1.7e-84 316.2 190 85.3
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.2e-82 310.1 188 83.5
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.6e-82 309.7 188 83.0
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.6e-82 309.7 188 83.0
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 3.0e-81 305.4 188 81.9
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 2.6e-77 292.4 190 76.3
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 6.4e-76 287.7 190 73.7
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 6.4e-76 287.7 190 72.1
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 1.1e-75 287.0 190 74.2
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 1.9e-75 286.2 190 75.3
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 2.4e-75 285.8 188 73.4
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 4.1e-75 285.0 188 72.9
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 7.1e-75 284.3 190 72.6
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 9.2e-75 283.9 190 72.6
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 9.2e-75 283.9 190 72.6
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 1.2e-74 283.5 188 70.7
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 1.6e-74 283.1 194 71.6
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 2.1e-74 282.7 189 68.8
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 2.1e-74 282.7 188 73.4
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 4.6e-74 281.6 190 72.1
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 7.8e-74 280.8 190 73.7
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 1.3e-73 280.0 190 71.6
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 1.7e-73 279.6 189 72.0
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 2.3e-73 279.3 191 69.6
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 3.9e-73 278.5 190 70.5
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 5.1e-73 278.1 189 70.9
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 6.6e-73 277.7 186 72.6
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 3.3e-72 275.4 190 71.1
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 7.3e-72 274.2 190 69.5
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 9.5e-72 273.9 187 71.7
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 2.1e-71 272.7 194 70.1
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 2.8e-71 272.3 190 68.4
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 4.7e-71 271.6 195 69.2
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 6.2e-71 271.2 188 69.1
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 8.1e-71 270.8 188 68.6
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 1.1e-70 270.4 188 70.2
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 1.8e-70 269.6 192 65.1
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 1.8e-70 269.6 187 69.0
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 5.2e-70 268.1 190 71.1
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 5.2e-70 268.1 190 67.9
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 6.8e-70 267.7 190 68.9
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 8.9e-70 267.3 186 70.4
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.2e-69 266.9 190 67.9
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 1.2e-69 266.9 190 67.9
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.5e-69 266.5 187 66.3
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 1.5e-69 266.5 192 64.1
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 2.0e-69 266.2 188 70.7
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 2.0e-69 266.2 188 70.7
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 2.6e-69 265.8 188 69.7
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 2.6e-69 265.8 185 70.3
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 3.4e-69 265.4 190 66.8
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 3.4e-69 265.4 185 69.7
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 4.4e-69 265.0 201 62.7
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 5.8e-69 264.6 185 70.8
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 7.6e-69 264.2 192 68.8
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.3e-68 263.5 192 68.8
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 1.3e-68 263.5 190 67.9
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 1.7e-68 263.1 194 65.5
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 3.7e-68 261.9 198 63.1
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 1.4e-67 260.0 198 62.6
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 1.4e-67 260.0 200 62.5
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 1.9e-67 259.6 188 67.0
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 3.2e-67 258.8 186 66.1
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 4.1e-67 258.5 190 67.4
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 5.4e-67 258.1 190 67.9
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 7.1e-67 257.7 199 66.8
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 1.2e-66 256.9 188 68.1
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 3.5e-66 255.4 188 63.3
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.5e-66 255.4 192 65.6
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 3.5e-66 255.4 192 65.6
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 6.0e-66 254.6 189 66.1
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 7.8e-66 254.2 195 65.1
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 1.0e-65 253.8 195 65.6
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 1.0e-65 253.8 188 66.0
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 1.7e-65 253.1 188 67.6
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 2.3e-65 252.7 190 64.7
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 2.3e-65 252.7 188 67.0
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 3.9e-65 251.9 188 66.0
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 5.1e-65 251.5 187 64.2
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 5.1e-65 251.5 180 68.9
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 5.1e-65 251.5 190 66.8
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 1.1e-64 250.4 198 65.2
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 1.1e-62 243.8 161 78.9
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 4.0e-62 241.9 216 57.9
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 8.9e-62 240.7 186 60.2
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 2.0e-61 239.6 202 60.9
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 7.8e-58 227.6 262 48.9
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 2.5e-56 222.6 134 75.4
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 2.5e-56 222.6 191 61.8
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 2.5e-56 222.6 155 67.7
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 1.6e-55 219.9 188 58.0
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 6.9e-54 214.5 157 69.4
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.5e-53 213.4 157 67.5
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 1.5e-53 213.4 184 57.6
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 4.4e-53 211.8 180 56.1
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 2.2e-52 209.5 156 66.0
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 8.4e-52 207.6 188 59.0
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 1.4e-51 206.8 157 65.0
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 1.9e-51 206.5 155 68.4
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 5.4e-51 204.9 190 56.8
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 1.7e-49 199.9 170 57.1
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 6.6e-49 198.0 157 60.5
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 3.4e-45 185.7 138 61.6
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 1.8e-41 173.3 192 50.0
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 2.4e-38 162.9 191 47.6
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 5.3e-38 161.8 184 48.9
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 9.3e-35 151.0 132 58.3
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 8.2e-31 137.9 189 42.9
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 8.2e-31 137.9 184 44.0
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 6.5e-28 128.3 72 81.9
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 1.0e-25 120.9 187 39.6
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 1.3e-15 87.4 56 71.4
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.4e-06 57.4 53 58.5


User provided reference genes

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