Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1031500 Malus domestica HOM05D000966 ORTHO05D007323 4.3e-139 498.0 260 100.0
Prupe.8G038500 Prunus persica HOM05D000966 ORTHO05D007323 1.2e-109 400.2 248 87.1
RcHm_v2.0_Chr1g0329491 Rosa chinensis HOM05D000966 ORTHO05D007323 9.9e-96 354.0 248 77.4
FAN01G0621 Fragaria x ananassa HOM05D000966 ORTHO05D007323 7.9e-93 344.4 248 77.4
FAN03G0153 Fragaria x ananassa HOM05D000966 ORTHO05D007323 3.9e-92 342.0 248 77.4
QL02p038471 Quercus lobata HOM05D000966 ORTHO05D007323 2.8e-82 309.3 253 69.6
CiPaw.15G013800 Carya illinoinensis HOM05D000966 ORTHO05D007323 2.2e-79 299.7 253 66.4
TAR381G1161 Trochodendron aralioides HOM05D000966 ORTHO05D007323 2.9e-79 299.3 255 65.5
Cfa018294 Carpinus fangiana HOM05D000966 ORTHO05D007323 6.5e-79 298.1 248 66.9
Potri.005G195400 Populus trichocarpa HOM05D000966 ORTHO05D007323 5.1e-76 288.5 253 64.4
Sabra05G0148900 Salix brachista HOM05D000966 ORTHO05D007323 5.7e-75 285.0 253 64.4
Ciclev10000952m.g Citrus clementina HOM05D000966 ORTHO05D007323 1.6e-74 283.5 252 63.9
TWI34G1291 Tripterygium wilfordii HOM05D000966 ORTHO05D007323 3.7e-74 282.3 247 64.8
Cpa.g.sc49.86 Carica papaya HOM05D000966 ORTHO05D007323 1.9e-70 270.0 252 61.1
Haze_17793 Corylus avellana HOM05D000966 ORTHO05D007323 3.2e-70 269.2 323 52.3
Atru.chr13.2052 Acer truncatum HOM05D000966 ORTHO05D007323 4.2e-70 268.9 252 62.3
Manes.12G141700 Manihot esculenta HOM05D000966 ORTHO05D007323 7.9e-69 264.6 253 59.7
Phvul.007G082400 Phaseolus vulgaris HOM05D000966 ORTHO05D007323 7.4e-67 258.1 247 59.9
Gorai.010G131600 Gossypium raimondii HOM05D000966 ORTHO05D007323 8.2e-66 254.6 254 57.9
arahy.Tifrunner.gnm1.ann1.Z2GQ5K Arachis hypogaea HOM05D000966 ORTHO05D007323 1.1e-65 254.2 252 59.5
VMungo0720G0673 Vigna mungo HOM05D000966 ORTHO05D007323 1.1e-65 254.2 247 59.1
CANSAT25G2301 Cannabis sativa HOM05D000966 ORTHO05D007323 1.4e-65 253.8 250 57.6
Gohir.D06G115100 Gossypium hirsutum HOM05D000966 ORTHO05D007323 1.4e-65 253.8 254 57.5
Gohir.A06G111200 Gossypium hirsutum HOM05D000966 ORTHO05D007323 2.4e-65 253.1 254 57.9
Lalb_Chr02g0141501 Lupinus albus HOM05D000966 ORTHO05D007323 4.1e-65 252.3 258 59.3
Ca_10671_v3 Cicer arietinum L. HOM05D000966 ORTHO05D007323 5.3e-65 251.9 253 58.5
Thecc.08G157600 Theobroma cacao HOM05D000966 ORTHO05D007323 2.6e-64 249.6 254 58.7
Duzib116G0132 Durio zibethinus HOM05D000966 ORTHO05D007323 5.9e-64 248.4 254 57.1
arahy.Tifrunner.gnm1.ann1.83HUSC Arachis hypogaea HOM05D000966 ORTHO05D007323 1.0e-63 247.7 252 58.3
MD10G1033100 Malus domestica HOM05D000966 ORTHO05D007323 2.9e-63 246.1 133 92.5
Glyma.20G168900 Glycine max HOM05D000966 ORTHO05D007323 8.5e-63 244.6 247 59.5
Sed0009464 Sechium edule HOM05D000966 ORTHO05D007323 2.5e-62 243.0 255 56.1
Glyma.10G222800 Glycine max HOM05D000966 ORTHO05D007323 5.5e-62 241.9 247 58.3
Psat6g191160 Pisum sativum HOM05D000966 ORTHO05D007323 1.0e-60 237.7 250 56.8
Lj5g0028132 Lotus japonicus HOM05D000966 ORTHO05D007323 1.8e-60 236.9 251 56.6
ClCG08G008820 Citrullus lanatus HOM05D000966 ORTHO05D007323 2.0e-59 233.4 256 54.7
Dinv25888 Davidia involucrata HOM05D000044 ORTHO05D002853 4.4e-59 232.3 236 58.5
MELO3C008329.2 Cucumis melo HOM05D000966 ORTHO05D007323 5.7e-59 231.9 256 54.3
Nn3g18699 Nelumbo nucifera HOM05D000966 ORTHO05D007323 9.7e-59 231.1 251 55.4
CsaV3_6G005070 Cucumis sativus L. HOM05D000966 ORTHO05D007323 2.2e-58 229.9 258 54.3
Hma1.2p1_0081F.1_g042500 Hydrangea macrophylla HOM05D000966 ORTHO05D007323 3.1e-57 226.1 253 52.2
TPR.G17050 Trifolium pratense HOM05D000966 ORTHO05D007323 4.1e-57 225.7 253 55.3
Medtr1g098000 Medicago truncatula HOM05D000966 ORTHO05D007323 5.0e-55 218.8 249 53.0
Medtr1g098370 Medicago truncatula HOM05D000966 ORTHO05D007323 4.2e-54 215.7 249 52.2
Aqoxy4G02511 Aquilegia oxysepala HOM05D000966 ORTHO05D007323 5.5e-54 215.3 255 52.2
Sc20g0003630 Simmondsia chinensis HOM05D000966 ORTHO05D007323 2.1e-53 213.4 251 53.4
Carub.0002s2362 Capsella rubella HOM05D000966 ORTHO05D007323 2.7e-53 213.0 249 53.0
PGR042G2706 Punica granatum HOM05D000966 ORTHO05D007323 4.7e-53 212.2 250 51.6
Eucgr.F02689 Eucalyptus grandis HOM05D000966 ORTHO05D007323 6.1e-53 211.8 248 53.6
PSO170G0768 Papaver somniferum HOM05D000966 ORTHO05D007323 3.0e-52 209.5 262 51.1
AL2G36860 Arabidopsis lyrata HOM05D000966 ORTHO05D007323 6.7e-52 208.4 249 52.2
PSO700G0340 Papaver somniferum HOM05D000966 ORTHO05D007323 1.5e-51 207.2 259 51.0
Sp5g31860 Schrenkiella parvula HOM05D000966 ORTHO05D007323 4.4e-51 205.7 246 52.0
Thhalv10018466m.g Eutrema salsugineum HOM05D000966 ORTHO05D007323 9.7e-51 204.5 252 52.4
GSVIVG01034572001 Vitis vinifera HOM05D000966 ORTHO05D007323 1.7e-50 203.8 246 50.4
AT1G76710 Arabidopsis thaliana HOM05D000966 ORTHO05D007323 4.5e-48 195.7 252 50.0
BcaC08g47180 Brassica carinata HOM05D001345 ORTHO05D001190 1.3e-47 194.1 232 53.9
Aa31LG4G6790 Aethionema arabicum HOM05D000966 ORTHO05D007323 1.7e-47 193.7 230 56.1
THA.LOC104812030 Tarenaya hassleriana HOM05D000966 ORTHO05D007323 1.1e-46 191.0 233 51.5
MSTRG.22010 Avicennia marina HOM05D000966 ORTHO05D007323 5.2e-44 182.2 251 49.8
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 9.7e-43 177.9 251 48.2
SalBow6G0098 Salvia bowleyana HOM05D000966 ORTHO05D007323 4.1e-41 172.6 248 45.2
Hund26681 Selenicereus undatus HOM05D000966 ORTHO05D007323 5.3e-41 172.2 250 43.2
Migut.N03097 Erythranthe guttata HOM05D000966 ORTHO05D007323 1.2e-40 171.0 257 45.9
CARHR070260 Cardamine hirsuta HOM05D000966 ORTHO05D007323 3.5e-40 169.5 250 44.0
AUR62026672 Chenopodium quinoa HOM05D000966 ORTHO05D007323 3.5e-40 169.5 247 44.5
Nitab4.5_0000617g0300 Nicotiana tabacum HOM05D000966 ORTHO05D007323 5.9e-40 168.7 244 46.3
Nitab4.5_0000949g0070 Nicotiana tabacum HOM05D000966 ORTHO05D007323 5.9e-40 168.7 244 45.9
ATR0584G286 Amborella trichopoda HOM05D000966 ORTHO05D007323 1.3e-39 167.5 228 44.7
AUR62040579 Chenopodium quinoa HOM05D000966 ORTHO05D007323 1.3e-39 167.5 247 43.3
Ah.02g124940 Amaranthus hybridus HOM05D000966 ORTHO05D007323 2.9e-39 166.4 246 41.9
BcaC08g47221 Brassica carinata HOM05D000966 ORTHO05D007323 2.9e-39 166.4 242 46.3
CDE12G0409 Ceratophyllum demersum HOM05D000966 ORTHO05D007323 3.8e-39 166.0 256 43.4
Peaxi162Scf01038g00145 Petunia axillaris HOM05D000966 ORTHO05D007323 5.0e-39 165.6 260 42.7
Oeu020493.1 Olea europaea HOM05D000966 ORTHO05D007323 9.4e-38 161.4 252 45.2
BolC6t40119H Brassica oleracea HOM05D000966 ORTHO05D007323 2.7e-37 159.8 253 45.8
A07p42380 Brassica napus HOM05D000966 ORTHO05D007323 8.0e-37 158.3 228 46.9
unitig_18.g30053 Utricularia gibba HOM05D000966 ORTHO05D007323 2.6e-35 153.3 187 48.7
unitig_8.g4809 Utricularia gibba HOM05D000966 ORTHO05D007323 2.6e-35 153.3 187 48.7
DCAR_001155 Daucus carota HOM05D000966 ORTHO05D007323 3.4e-35 152.9 252 38.9
Peaxi162Scf00088g00919 Petunia axillaris HOM05D000966 ORTHO05D007323 4.4e-35 152.5 242 43.4
C06p50930 Brassica napus HOM05D000966 ORTHO05D007323 1.3e-34 151.0 271 41.3
COL.COLO4_13799 Corchorus olitorius HOM05D000966 ORTHO05D007323 2.2e-34 150.2 244 44.3
Cc03_g11990 Coffea canephora HOM05D000966 ORTHO05D007323 2.8e-34 149.8 224 42.4
BraA07t31764Z Brassica rapa HOM05D000966 ORTHO05D007323 6.3e-34 148.7 245 44.1
EL10Ac1g01592 Beta vulgaris HOM05D000966 ORTHO05D007323 2.7e-32 143.3 133 57.1
MD10G1033000 Malus domestica HOM05D000966 ORTHO05D007323 7.7e-32 141.7 89 87.6
ECA233G6088 Erigeron canadensis HOM05D000966 ORTHO05D007323 5.0e-31 139.0 254 39.8
A07p42370 Brassica napus HOM05D000966 ORTHO05D007323 1.9e-30 137.1 135 57.0
Medtr1g098030 Medicago truncatula HOM05D000966 ORTHO05D007323 5.5e-30 135.6 212 45.8
Lj4C702T3 Lonicera japonica HOM05D000966 ORTHO05D007323 9.5e-30 134.8 245 41.2
Os04g0429100 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D007323 9.5e-30 134.8 281 34.2
Cc00_g32880 Coffea canephora HOM05D000966 ORTHO05D007323 3.0e-28 129.8 225 38.7
Actinidia17776 Actinidia chinensis HOM05D000966 ORTHO05D007323 5.2e-28 129.0 245 38.0
Zm00001eb082920 Zea mays HOM05D000966 ORTHO05D007323 8.9e-28 128.3 270 35.2
HanXRQChr08g0226091 Helianthus annuus HOM05D000966 ORTHO05D007323 7.5e-27 125.2 232 37.5
HPP92_009293 Vanilla planifolia HOM05D000966 ORTHO05D007323 4.9e-26 122.5 105 58.1
PGSC0003DMG400010972 Solanum tuberosum HOM05D000966 ORTHO05D007323 8.3e-26 121.7 156 44.9
Sopen07g004390 Solanum pennellii HOM05D000966 ORTHO05D007323 2.4e-25 120.2 156 44.9
Solyc07g008460.3 Solanum lycopersicum HOM05D000966 ORTHO05D007323 5.4e-25 119.0 156 44.9
CAN.G555.11 Capsicum annuum HOM05D000966 ORTHO05D007323 1.2e-24 117.9 137 50.4
GSVIVG01034571001 Vitis vinifera HOM05D000966 ORTHO05D007323 2.7e-24 116.7 133 48.9
Oeu056130.2 Olea europaea HOM05D000966 ORTHO05D007323 4.5e-24 115.9 130 50.0
Lsat_1_v5_gn_8_521 Lactuca sativa HOM05D000966 ORTHO05D007323 5.2e-20 102.4 222 33.8
Rhsim06G0128000 Rhododendron simsii HOM05D000966 ORTHO05D007323 3.0e-15 86.7 99 49.5
SEGI_26212 Sequoiadendron giganteum HOM05D000966 ORTHO05D007323 5.0e-15 85.9 262 30.2
Cc03_g12000 Coffea canephora HOM05D000966 ORTHO05D007323 1.9e-14 84.0 171 33.9
CSS0040268 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D007323 7.3e-14 82.0 109 50.5
ECA234G4770 Erigeron canadensis HOM05D000966 ORTHO05D007323 2.5e-06 57.0 45 62.2


User provided reference genes

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