Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 2.2e-221 771.9 373 100.0
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 3.9e-194 681.4 369 88.9
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 4.0e-175 618.2 358 82.7
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 2.3e-170 602.4 352 80.4
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.1e-167 593.6 360 77.5
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 7.9e-163 577.4 428 67.1
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 5.1e-162 574.7 416 68.3
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 7.4e-161 570.9 353 76.8
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 7.4e-161 570.9 359 75.2
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 2.4e-159 565.8 360 75.3
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 3.1e-159 565.5 351 76.4
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 4.5e-158 561.6 357 75.9
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 5.9e-158 561.2 356 73.6
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 6.5e-157 557.8 369 72.1
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 2.5e-156 555.8 369 70.7
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 5.5e-156 554.7 330 79.7
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 9.4e-156 553.9 354 74.6
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 2.3e-154 549.3 456 61.8
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 3.0e-154 548.9 357 73.4
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.9e-154 548.5 360 72.5
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 3.3e-153 545.4 353 72.2
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 4.4e-153 545.0 353 73.7
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 4.4e-153 545.0 353 72.0
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 7.4e-153 544.3 352 70.2
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 7.4e-153 544.3 353 72.0
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 1.3e-152 543.5 355 73.8
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 1.3e-152 543.5 357 72.0
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 2.2e-152 542.7 361 72.0
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 2.2e-152 542.7 353 72.8
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 3.4e-150 535.4 356 73.0
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.0e-149 533.9 357 70.3
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 1.3e-149 533.5 352 68.8
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 7.2e-148 527.7 353 71.7
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 1.6e-147 526.6 356 69.9
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.4e-146 523.5 350 67.7
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 3.9e-146 521.9 354 70.6
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 9.7e-145 517.3 351 69.8
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 9.7e-145 517.3 353 69.7
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 2.8e-144 515.8 354 70.1
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 3.7e-144 515.4 384 65.4
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 4.8e-144 515.0 350 69.1
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 4.8e-144 515.0 353 69.7
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 7.0e-143 511.1 351 69.5
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 1.0e-141 507.3 354 68.9
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 1.7e-141 506.5 352 71.3
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 2.2e-141 506.1 357 68.1
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.1e-140 503.8 352 68.5
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 3.6e-139 498.8 360 65.3
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 1.2e-137 493.8 362 65.5
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 7.5e-137 491.1 506 53.0
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 3.7e-136 488.8 352 67.3
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 1.1e-135 487.3 325 68.9
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 3.1e-135 485.7 352 64.2
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 1.2e-134 483.8 360 67.2
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.6e-134 483.4 352 64.8
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 4.5e-134 481.9 358 63.4
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 2.3e-130 469.5 355 64.2
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 2.3e-130 469.5 355 64.2
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 5.2e-130 468.4 355 63.9
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 1.5e-129 466.8 352 63.6
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 1.7e-125 453.4 362 61.0
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 7.2e-124 448.0 354 63.6
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 7.5e-121 438.0 462 51.7
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 9.2e-111 404.4 286 67.5
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.3e-93 347.4 290 60.7
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 1.1e-92 344.4 357 47.9
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 2.8e-91 339.7 239 68.2
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 1.5e-89 334.0 191 78.0
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 3.9e-85 319.3 356 45.5
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 6.9e-82 308.5 343 51.0
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 7.6e-81 305.1 197 71.1
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 1.2e-73 281.2 215 67.0
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 4.8e-67 259.2 162 71.6
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 1.5e-65 254.2 146 77.4
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 3.3e-60 236.5 229 50.7
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 4.0e-58 229.6 248 51.2
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 4.9e-56 222.6 355 36.3
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.6e-54 217.6 135 71.9
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 9.0e-50 201.8 159 63.5
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.5e-41 174.5 395 31.1
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 1.0e-40 171.8 105 75.2
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 6.5e-40 169.1 128 68.0
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 1.2e-38 164.9 424 29.5
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 8.0e-30 135.6 103 68.0
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.1e-28 131.7 74 74.3
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 7.4e-28 129.0 70 77.1
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 7.4e-28 129.0 70 77.1
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 1.3e-27 128.3 70 78.6
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.8e-27 126.3 102 62.7
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 6.3e-27 125.9 101 55.4
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.4e-26 124.8 104 55.8
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 7.7e-25 119.0 113 56.6
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.7e-22 110.5 67 77.6
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.6e-22 110.2 67 76.1
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.4e-21 108.2 67 74.6
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 1.4e-21 108.2 296 28.0
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.0e-21 106.7 67 74.6
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 6.3e-19 99.4 74 64.9
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 3.1e-18 97.1 164 38.4
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 1.6e-17 94.7 137 42.3
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.0e-17 94.4 88 55.7
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.2e-16 90.9 53 67.9
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.8e-13 81.3 94 45.7
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 5.2e-13 79.7 65 55.4
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 5.4e-10 69.7 91 42.9
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 2.3e-08 64.3 57 52.6
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 2.9e-08 63.9 119 42.9
Cpa.g.sc21.203 Carica papaya HOM05D007327 ORTHO05D118724 4.7e-06 56.6 40 55.0


User provided reference genes

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