Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1024600 Malus domestica HOM05D000490 ORTHO05D000785 7.0e-28 126.7 71 100.0
MD13G1205600 Malus domestica HOM05D000490 ORTHO05D000785 4.0e-23 110.9 71 88.7
MD16G1207300 Malus domestica HOM05D000490 ORTHO05D000785 9.8e-22 106.3 71 85.9
Prupe.1G028100 Prunus persica HOM05D000490 ORTHO05D000785 5.4e-20 100.5 71 77.5
MD08G1228100 Malus domestica HOM05D000490 ORTHO05D000785 1.2e-19 99.4 71 80.3
RcHm_v2.0_Chr4g0389731 Rosa chinensis HOM05D000490 ORTHO05D000785 3.5e-19 97.8 71 76.1
FAN22G0821 Fragaria x ananassa HOM05D000490 ORTHO05D000785 8.6e-18 93.2 71 71.8
FAN17G1133 Fragaria x ananassa HOM05D000490 ORTHO05D000785 3.3e-17 91.3 70 70.0
FvH4_4g02350 Fragaria vesca HOM05D000490 ORTHO05D000785 1.2e-16 89.4 71 69.0
FAN12G4302 Fragaria x ananassa HOM05D000490 ORTHO05D000785 1.2e-16 89.4 71 69.0
Aqoxy2G03553 Aquilegia oxysepala HOM05D000490 ORTHO05D000785 1.7e-10 68.9 58 62.1
MD10G1191700 Malus domestica HOM05D000490 ORTHO05D000785 1.5e-09 65.9 56 64.3
TAR365G0432 Trochodendron aralioides HOM05D000490 ORTHO05D000785 1.5e-09 65.9 58 56.9
Ciclev10005568m.g Citrus clementina HOM05D000490 ORTHO05D000785 2.5e-09 65.1 67 58.2
MD05G1204600 Malus domestica HOM05D000490 ORTHO05D000785 4.3e-09 64.3 56 58.9
TAR633G2350 Trochodendron aralioides HOM05D000093 ORTHO05D000835 7.3e-09 63.5 50 66.0
Atru.chr4.2266 Acer truncatum HOM05D000490 ORTHO05D000785 1.6e-08 62.4 56 64.3
Prupe.8G231200 Prunus persica HOM05D000490 ORTHO05D000785 3.6e-08 61.2 56 58.9
TAR636G3500 Trochodendron aralioides HOM05D000490 ORTHO05D000785 3.6e-08 61.2 69 55.1
Lj1g0023489 Lotus japonicus HOM05D000490 ORTHO05D000785 6.2e-08 60.5 57 64.9
Dinv20291 Davidia involucrata HOM05D000490 ORTHO05D000785 1.4e-07 59.3 58 56.9
TWI18G0217 Tripterygium wilfordii HOM05D000490 ORTHO05D000785 1.8e-07 58.9 56 64.3
vmacro13812 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 1.8e-07 58.9 59 59.3
Ca_08651_v3 Cicer arietinum L. HOM05D000490 ORTHO05D000785 2.4e-07 58.5 56 62.5
Lj5g0007561 Lotus japonicus HOM05D000490 ORTHO05D000785 2.4e-07 58.5 58 56.9
MBI04_g47791_MAGBIO Magnolia biondii HOM05D000490 ORTHO05D000785 3.1e-07 58.2 58 50.0
CSS0032635 Camellia sinensis var. sinensis HOM05D000490 ORTHO05D000785 4.0e-07 57.8 58 55.2
CSS0037929 Camellia sinensis var. sinensis HOM05D000490 ORTHO05D000785 4.0e-07 57.8 58 55.2
Ciclev10022315m.g Citrus clementina HOM05D000490 ORTHO05D000785 4.0e-07 57.8 56 55.4
Nn1g02585 Nelumbo nucifera HOM05D000490 ORTHO05D000785 4.0e-07 57.8 58 50.0
TAR362G0752 Trochodendron aralioides HOM05D000490 ORTHO05D000785 4.0e-07 57.8 58 51.7
CSS0029709 Camellia sinensis var. sinensis HOM05D000490 ORTHO05D000785 5.2e-07 57.4 58 50.0
Cc03_g04780 Coffea canephora HOM05D000490 ORTHO05D000785 5.2e-07 57.4 69 50.7
Hma1.2p1_0817F.1_g223150 Hydrangea macrophylla HOM05D000490 ORTHO05D000785 5.2e-07 57.4 58 55.2
Solyc09g066000.1 Solanum lycopersicum HOM05D000490 ORTHO05D000785 5.2e-07 57.4 58 56.9
Actinidia19987 Actinidia chinensis HOM05D000490 ORTHO05D000785 8.9e-07 56.6 57 57.9
Cpa.g.sc617.2 Carica papaya HOM05D000490 ORTHO05D000785 8.9e-07 56.6 56 55.4
Cc02_g30800 Coffea canephora HOM05D000490 ORTHO05D000785 8.9e-07 56.6 58 51.7
Potri.002G044000 Populus trichocarpa HOM05D000490 ORTHO05D000785 8.9e-07 56.6 56 50.0
Sopen09g027770 Solanum pennellii HOM05D000490 ORTHO05D000785 8.9e-07 56.6 58 56.9
CANSAT78G0218 Cannabis sativa HOM05D000490 ORTHO05D000785 1.2e-06 56.2 71 52.1
QL03p027247 Quercus lobata HOM05D000490 ORTHO05D000785 1.2e-06 56.2 56 57.1
Migut.B01097 Erythranthe guttata HOM05D000490 ORTHO05D000785 1.5e-06 55.8 58 51.7
Lj9P662T17 Lonicera japonica HOM05D000490 ORTHO05D000785 1.5e-06 55.8 58 55.2
Actinidia19988 Actinidia chinensis HOM05D000490 ORTHO05D000785 2.0e-06 55.5 57 56.1
Actinidia19990 Actinidia chinensis HOM05D000490 ORTHO05D000785 2.0e-06 55.5 57 56.1
Psat3g059920 Pisum sativum HOM05D000490 ORTHO05D000785 2.6e-06 55.1 56 60.7
CiPaw.03G258500 Carya illinoinensis HOM05D000490 ORTHO05D000785 3.4e-06 54.7 55 54.5
PGSC0003DMG400015078 Solanum tuberosum HOM05D000490 ORTHO05D000785 3.4e-06 54.7 58 55.2
Prupe.6G344700 Prunus persica HOM05D000490 ORTHO05D000785 4.4e-06 54.3 58 53.4
PSO017G6216 Papaver somniferum HOM05D000490 ORTHO05D000785 5.8e-06 53.9 50 58.0
PSO063G5222 Papaver somniferum HOM05D000490 ORTHO05D000785 5.8e-06 53.9 50 58.0
Thecc.01G266400 Theobroma cacao HOM05D000490 ORTHO05D000785 5.8e-06 53.9 58 53.4
VMungo0720G1222 Vigna mungo HOM05D000490 ORTHO05D000785 5.8e-06 53.9 64 50.0
VMungo1383G3205 Vigna mungo HOM05D000490 ORTHO05D000785 5.8e-06 53.9 70 50.0
Manes.09G151700 Manihot esculenta HOM05D000490 ORTHO05D000785 7.6e-06 53.5 58 50.0
Medtr7g096220 Medicago truncatula HOM05D000490 ORTHO05D000785 7.6e-06 53.5 74 48.6
Actinidia24946 Actinidia chinensis HOM05D000490 ORTHO05D000785 9.9e-06 53.1 51 52.9
Carub.0001s0811 Capsella rubella HOM05D000490 ORTHO05D000785 9.9e-06 53.1 71 42.3
Eucgr.B01496 Eucalyptus grandis HOM05D000490 ORTHO05D000785 9.9e-06 53.1 55 54.5
Glyma.03G159600 Glycine max HOM05D000490 ORTHO05D000785 9.9e-06 53.1 73 50.7
unitig_747.g21347 Utricularia gibba HOM05D000490 ORTHO05D000785 9.9e-06 53.1 58 55.2


User provided reference genes

Program Settings