Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1008500 Malus domestica HOM05D003982 ORTHO05D004831 3.3e-43 177.9 88 100.0
MD03G1100700 Malus domestica HOM05D003982 ORTHO05D004831 7.4e-35 150.2 87 87.4
MD11G1114800 Malus domestica HOM05D003982 ORTHO05D004831 2.2e-31 138.7 87 82.8
Prupe.6G085700 Prunus persica HOM05D003982 ORTHO05D004831 1.3e-28 129.4 87 77.0
RcHm_v2.0_Chr5g0062701 Rosa chinensis HOM05D003982 ORTHO05D004831 4.0e-25 117.9 86 69.8
FAN21G4048 Fragaria x ananassa HOM05D003982 ORTHO05D004831 6.9e-25 117.1 87 71.3
FvH4_3g34850 Fragaria vesca HOM05D003982 ORTHO05D004831 1.2e-24 116.3 89 69.7
FAN25G3842 Fragaria x ananassa HOM05D003982 ORTHO05D004831 1.2e-24 116.3 89 69.7
FAN16G2231 Fragaria x ananassa HOM05D003982 ORTHO05D004831 1.5e-24 115.9 89 69.7
FAN11G3073 Fragaria x ananassa HOM05D003982 ORTHO05D004831 2.6e-24 115.2 88 70.5
Potri.001G234800 Populus trichocarpa HOM05D003982 ORTHO05D004831 2.6e-24 115.2 83 72.3
BraA03t10464Z Brassica rapa HOM05D003982 ORTHO05D004831 5.8e-24 114.0 87 67.8
CANSAT54G2978 Cannabis sativa HOM05D003982 ORTHO05D004831 5.8e-24 114.0 87 70.1
Cfa011440 Carpinus fangiana HOM05D003982 ORTHO05D004831 5.8e-24 114.0 88 70.5
Eucgr.J02078 Eucalyptus grandis HOM05D003982 ORTHO05D004831 5.8e-24 114.0 76 80.3
Cpa.g.sc252.18 Carica papaya HOM05D003982 ORTHO05D004831 7.6e-24 113.6 87 65.5
Haze_24023 Corylus avellana HOM05D003982 ORTHO05D004831 7.6e-24 113.6 84 70.2
BolC3t13794H Brassica oleracea HOM05D003982 ORTHO05D004831 1.0e-23 113.2 87 70.1
AT5G59740 Arabidopsis thaliana HOM05D003982 ORTHO05D004831 1.3e-23 112.8 87 66.7
A03p11500 Brassica napus HOM05D003982 ORTHO05D004831 1.7e-23 112.5 87 69.0
Sp6g21410 Schrenkiella parvula HOM05D003982 ORTHO05D004831 2.2e-23 112.1 87 67.8
BcaC04g19625 Brassica carinata HOM05D003982 ORTHO05D004831 2.9e-23 111.7 87 65.5
C03p13320 Brassica napus HOM05D003982 ORTHO05D004831 2.9e-23 111.7 87 69.0
C09p52220 Brassica napus HOM05D003982 ORTHO05D004831 2.9e-23 111.7 87 65.5
BolC9t58089H Brassica oleracea HOM05D003982 ORTHO05D004831 2.9e-23 111.7 87 65.5
BraA10t43781Z Brassica rapa HOM05D003982 ORTHO05D004831 2.9e-23 111.7 87 65.5
Gohir.D03G130300 Gossypium hirsutum HOM05D003982 ORTHO05D004831 2.9e-23 111.7 87 66.7
Gorai.003G137000 Gossypium raimondii HOM05D003982 ORTHO05D004831 2.9e-23 111.7 87 66.7
A10p16970 Brassica napus HOM05D003982 ORTHO05D004831 3.8e-23 111.3 87 65.5
COL.COLO4_18437 Corchorus olitorius HOM05D003982 ORTHO05D004831 3.8e-23 111.3 87 66.7
BcaC01g06551 Brassica carinata HOM05D003982 ORTHO05D004831 4.9e-23 110.9 87 69.0
BolC2t07323H Brassica oleracea HOM05D003982 ORTHO05D004831 4.9e-23 110.9 87 67.8
BcaB05g22537 Brassica carinata HOM05D003982 ORTHO05D004831 6.5e-23 110.5 87 67.8
C02p12210 Brassica napus HOM05D003982 ORTHO05D004831 6.5e-23 110.5 87 67.8
CiPaw.13G100100 Carya illinoinensis HOM05D003982 ORTHO05D004831 6.5e-23 110.5 88 68.2
PSO339G1754 Papaver somniferum HOM05D003982 ORTHO05D004831 6.5e-23 110.5 74 75.7
Lalb_Chr14g0374961 Lupinus albus HOM05D003982 ORTHO05D004831 1.1e-22 109.8 90 65.6
TAR633G2721 Trochodendron aralioides HOM05D003982 ORTHO05D004831 1.1e-22 109.8 74 74.3
Actinidia03777 Actinidia chinensis HOM05D003982 ORTHO05D004831 1.4e-22 109.4 74 74.3
AL8G36260 Arabidopsis lyrata HOM05D003982 ORTHO05D004831 1.4e-22 109.4 87 64.4
Duzib168G2133 Durio zibethinus HOM05D003982 ORTHO05D004831 1.4e-22 109.4 87 65.5
TWI79G0386 Tripterygium wilfordii HOM05D003982 ORTHO05D004831 1.4e-22 109.4 77 72.7
A02p06910 Brassica napus HOM05D003982 ORTHO05D004831 1.9e-22 109.0 87 66.7
CARHR273320 Cardamine hirsuta HOM05D003982 ORTHO05D004831 1.9e-22 109.0 87 66.7
ClCG02G020490 Citrullus lanatus HOM05D003982 ORTHO05D004831 1.9e-22 109.0 74 75.7
MELO3C013673.2 Cucumis melo HOM05D003982 ORTHO05D004831 1.9e-22 109.0 74 75.7
CsaV3_6G022130 Cucumis sativus L. HOM05D003982 ORTHO05D004831 1.9e-22 109.0 74 75.7
Glyma.11G143500 Glycine max HOM05D003982 ORTHO05D004831 1.9e-22 109.0 74 75.7
TWI31G0176 Tripterygium wilfordii HOM05D003982 ORTHO05D004831 1.9e-22 109.0 78 70.5
Sabra16G0141000 Salix brachista HOM05D003982 ORTHO05D004831 2.5e-22 108.6 83 68.7
BraA02t05770Z Brassica rapa HOM05D003982 ORTHO05D004831 3.2e-22 108.2 87 66.7
Thhalv10014012m.g Eutrema salsugineum HOM05D003982 ORTHO05D004831 3.2e-22 108.2 87 66.7
Lj3g0005665 Lotus japonicus HOM05D003982 ORTHO05D004831 3.2e-22 108.2 92 63.0
Sc21g0005410 Simmondsia chinensis HOM05D003982 ORTHO05D004831 3.2e-22 108.2 87 65.5
GSVIVG01025043001 Vitis vinifera HOM05D003982 ORTHO05D004831 3.2e-22 108.2 86 65.1
Thecc.09G328700 Theobroma cacao HOM05D003982 ORTHO05D004831 4.2e-22 107.8 80 67.5
Lj3g0020703 Lotus japonicus HOM05D003982 ORTHO05D004831 9.3e-22 106.7 74 74.3
PSO206G0007 Papaver somniferum HOM05D003982 ORTHO05D004831 9.3e-22 106.7 74 73.0
CiPaw.14G072900 Carya illinoinensis HOM05D003982 ORTHO05D004831 1.2e-21 106.3 84 66.7
Gohir.A03G038100 Gossypium hirsutum HOM05D003982 ORTHO05D004831 1.2e-21 106.3 87 65.5
VMungo1080G1641 Vigna mungo HOM05D003982 ORTHO05D004831 1.2e-21 106.3 74 73.0
arahy.Tifrunner.gnm1.ann1.95NMQN Arachis hypogaea HOM05D003982 ORTHO05D004831 1.6e-21 105.9 74 70.3
arahy.Tifrunner.gnm1.ann1.AUFX4T Arachis hypogaea HOM05D003982 ORTHO05D004831 1.6e-21 105.9 74 70.3
Carub.0008s2039 Capsella rubella HOM05D003982 ORTHO05D004831 1.6e-21 105.9 87 64.4
Hund05010 Selenicereus undatus HOM05D003982 ORTHO05D004831 1.6e-21 105.9 78 71.8
Lalb_Chr22g0350001 Lupinus albus HOM05D003982 ORTHO05D004831 2.1e-21 105.5 75 69.3
BcaB05g22572 Brassica carinata HOM05D003982 ORTHO05D004831 2.7e-21 105.1 89 64.0
Migut.N02659 Erythranthe guttata HOM05D003982 ORTHO05D004831 2.7e-21 105.1 86 66.3
THA.LOC104799459 Tarenaya hassleriana HOM05D003982 ORTHO05D004831 2.7e-21 105.1 87 65.5
Glyma.15G041700 Glycine max HOM05D003982 ORTHO05D004831 3.5e-21 104.8 74 71.6
TAR636G3601 Trochodendron aralioides HOM05D003982 ORTHO05D004831 3.5e-21 104.8 74 70.3
THA.LOC104810797 Tarenaya hassleriana HOM05D003982 ORTHO05D004831 4.6e-21 104.4 79 69.6
Thhalv10002597m.g Eutrema salsugineum HOM05D003982 ORTHO05D004831 6.1e-21 104.0 87 64.4
PGR119G1985 Punica granatum HOM05D003982 ORTHO05D004831 6.1e-21 104.0 74 71.6
Medtr4g063040 Medicago truncatula HOM05D003982 ORTHO05D004831 7.9e-21 103.6 74 73.0
Psat5g282440 Pisum sativum HOM05D003982 ORTHO05D004831 7.9e-21 103.6 72 72.2
Solyc06g005290.3 Solanum lycopersicum HOM05D003982 ORTHO05D004831 7.9e-21 103.6 81 67.9
Sopen06g001270 Solanum pennellii HOM05D003982 ORTHO05D004831 7.9e-21 103.6 81 67.9
EL10Ac7g15957 Beta vulgaris HOM05D003982 ORTHO05D004831 1.0e-20 103.2 86 62.8
Duzib150G0206 Durio zibethinus HOM05D003982 ORTHO05D004831 1.0e-20 103.2 87 62.1
PGSC0003DMG400010880 Solanum tuberosum HOM05D003982 ORTHO05D004831 1.3e-20 102.8 81 67.9
Aqoxy4G03037 Aquilegia oxysepala HOM05D003982 ORTHO05D004831 1.8e-20 102.4 74 68.9
Ah.08g214870 Amaranthus hybridus HOM05D003982 ORTHO05D004831 3.0e-20 101.7 78 69.2
unitig_744.g24621 Utricularia gibba HOM05D003982 ORTHO05D004831 3.0e-20 101.7 74 67.6
Carub.0005s1200 Capsella rubella HOM05D003982 ORTHO05D004831 3.9e-20 101.3 73 71.2
Gohir.A05G098200 Gossypium hirsutum HOM05D003982 ORTHO05D004831 3.9e-20 101.3 73 71.2
MSTRG.12630 Avicennia marina HOM05D003982 ORTHO05D004831 5.1e-20 100.9 74 68.9
Rhsim13G0087500 Rhododendron simsii HOM05D003982 ORTHO05D004831 5.1e-20 100.9 74 68.9
TPR.G35371 Trifolium pratense HOM05D003982 ORTHO05D004831 5.1e-20 100.9 71 70.4
Dinv32845 Davidia involucrata HOM05D002619 ORTHO05D002804 6.7e-20 100.5 78 69.2
PGSC0003DMG400015563 Solanum tuberosum HOM05D003982 ORTHO05D004831 6.7e-20 100.5 74 70.3
TPR.G34316 Trifolium pratense HOM05D003982 ORTHO05D004831 6.7e-20 100.5 71 70.4
AT3G46180 Arabidopsis thaliana HOM05D003982 ORTHO05D004831 8.7e-20 100.1 73 69.9
CARHR154570 Cardamine hirsuta HOM05D003982 ORTHO05D004831 8.7e-20 100.1 73 68.5
Sed0000090 Sechium edule HOM05D003982 ORTHO05D004831 8.7e-20 100.1 74 73.0
Gohir.D05G098300 Gossypium hirsutum HOM05D003982 ORTHO05D004831 1.1e-19 99.8 73 69.9
Gorai.009G101900 Gossypium raimondii HOM05D003982 ORTHO05D004831 1.1e-19 99.8 73 69.9
Medtr2g096300 Medicago truncatula HOM05D003982 ORTHO05D004831 1.1e-19 99.8 72 69.4
Sp5g15450 Schrenkiella parvula HOM05D003982 ORTHO05D004831 1.1e-19 99.8 73 68.5
EL10Ac4g08133 Beta vulgaris HOM05D003982 ORTHO05D004831 1.5e-19 99.4 78 65.4
Sopen11g030820 Solanum pennellii HOM05D003982 ORTHO05D004831 1.5e-19 99.4 74 70.3
Atru.chr3.3810 Acer truncatum HOM05D003982 ORTHO05D004831 2.5e-19 98.6 74 66.2
CAN.G241.39 Capsicum annuum HOM05D003982 ORTHO05D004831 2.5e-19 98.6 74 70.3
AUR62035920 Chenopodium quinoa HOM05D003982 ORTHO05D004831 2.5e-19 98.6 78 66.7
Lj2C1051T6 Lonicera japonica HOM05D003982 ORTHO05D004831 3.3e-19 98.2 86 60.5
SHI07539 Sapria himalayana HOM05D003982 ORTHO05D004831 3.3e-19 98.2 80 65.0
VMungo1127G2086 Vigna mungo HOM05D003982 ORTHO05D004831 3.3e-19 98.2 74 68.9
Cc01_g12230 Coffea canephora HOM05D003982 ORTHO05D004831 5.7e-19 97.4 90 62.2
AUR62014952 Chenopodium quinoa HOM05D003982 ORTHO05D004831 7.4e-19 97.1 78 64.1
AUR62035919 Chenopodium quinoa HOM05D003982 ORTHO05D004831 9.7e-19 96.7 78 65.4
Lj1A161T61 Lonicera japonica HOM05D003982 ORTHO05D004831 9.7e-19 96.7 67 74.6
Aa31LG4G15290 Aethionema arabicum HOM05D003982 ORTHO05D004831 1.3e-18 96.3 74 66.2
AL5G24910 Arabidopsis lyrata HOM05D003982 ORTHO05D004831 1.3e-18 96.3 73 67.1
Zm00001eb266330 Zea mays HOM05D003982 ORTHO05D004831 1.3e-18 96.3 67 73.1
AUR62029186 Chenopodium quinoa HOM05D003982 ORTHO05D004831 1.6e-18 95.9 78 64.1
Lsat_1_v5_gn_5_166500 Lactuca sativa HOM05D003982 ORTHO05D004831 2.2e-18 95.5 74 68.9
Rhsim01G0224300 Rhododendron simsii HOM05D003982 ORTHO05D004831 2.2e-18 95.5 88 58.0
ECA248G2684 Erigeron canadensis HOM05D003982 ORTHO05D004831 2.8e-18 95.1 88 59.1
DCAR_006010 Daucus carota HOM05D003982 ORTHO05D004831 3.7e-18 94.7 72 69.4
DCAR_023863 Daucus carota HOM05D003982 ORTHO05D004831 3.7e-18 94.7 87 58.6
Zm00001eb355590 Zea mays HOM05D003982 ORTHO05D004831 4.8e-18 94.4 67 71.6
HanXRQChr01g0009941 Helianthus annuus HOM05D003982 ORTHO05D004831 6.3e-18 94.0 74 66.2
Os05g0115700 Oryza sativa ssp. japonica HOM05D003982 ORTHO05D004831 8.2e-18 93.6 67 70.1
Actinidia33854 Actinidia chinensis HOM05D003982 ORTHO05D004831 1.4e-17 92.8 63 73.0
HanXRQChr11g0340301 Helianthus annuus HOM05D003982 ORTHO05D004831 1.8e-17 92.4 80 61.2
Hma1.2p1_0846F.1_g227680 Hydrangea macrophylla HOM05D003982 ORTHO05D004831 4.1e-17 91.3 63 74.6
HPP92_021083 Vanilla planifolia HOM05D003982 ORTHO05D004831 4.5e-16 87.8 86 55.8
CAN.G820.8 Capsicum annuum HOM05D003982 ORTHO05D004831 5.9e-16 87.4 61 72.1
ATR0782G014 Amborella trichopoda HOM05D003982 ORTHO05D004831 2.9e-15 85.1 62 69.4
SGA_v2.0_scaffold39G15249 Striga asiatica HOM05D003982 ORTHO05D004831 6.5e-15 84.0 64 67.2
Nitab4.5_0010238g0010 Nicotiana tabacum HOM05D003982 ORTHO05D004831 4.2e-14 81.3 74 62.2
Oeu058524.1 Olea europaea HOM05D003982 ORTHO05D004831 4.2e-14 81.3 115 47.0
vmacro03118 Vaccinium macrocarpon HOM05D003982 ORTHO05D004831 5.5e-14 80.9 97 52.6
Glyma.13G332500 Glycine max HOM05D003982 ORTHO05D004831 1.6e-13 79.3 73 60.3
QL01p033527 Quercus lobata HOM05D003982 ORTHO05D004831 2.7e-13 78.6 104 48.1
Nitab4.5_0000070g0080 Nicotiana tabacum HOM05D003982 ORTHO05D004831 2.0e-11 72.4 50 74.0
SalBow3G3142 Salvia bowleyana HOM05D003982 ORTHO05D004831 2.0e-11 72.4 52 69.2
vmacro14502 Vaccinium macrocarpon HOM05D003982 ORTHO05D004831 2.0e-11 72.4 52 69.2
Mapoly0039s0069 Marchantia polymorpha HOM05D003982 ORTHO05D004831 4.3e-11 71.2 88 40.9
SMO358G0604 Selaginella moellendorffii HOM05D003982 ORTHO05D004831 5.7e-11 70.9 65 55.4
MBI05_g07846_MAGBIO Magnolia biondii HOM05D003982 ORTHO05D004831 9.7e-11 70.1 82 48.8
Phvul.L002043 Phaseolus vulgaris HOM05D003982 ORTHO05D004831 1.7e-10 69.3 50 70.0
Dinv26277 Davidia involucrata HOM05D003982 ORTHO05D004831 3.7e-10 68.2 47 72.3
Glyma.12G066800 Glycine max HOM05D003982 ORTHO05D004831 4.8e-10 67.8 47 72.3
Pp3c14_24680 Physcomitrium patens HOM05D003982 ORTHO05D004831 8.2e-10 67.0 82 43.9
Oeu040286.1 Olea europaea HOM05D003982 ORTHO05D004831 1.1e-09 66.6 47 72.3
CAN.G819.8 Capsicum annuum HOM05D003982 ORTHO05D004831 1.4e-09 66.2 49 69.4
AagrBONN_evm.TU.Sc2ySwM_228.2665 Anthoceros agrestis HOM05D003982 ORTHO05D004831 2.4e-09 65.5 70 45.7
Phvul.011G067700 Phaseolus vulgaris HOM05D003982 ORTHO05D004831 2.4e-09 65.5 47 70.2
Oeu041008.1 Olea europaea HOM05D003982 ORTHO05D004831 4.1e-09 64.7 47 68.1
MCO04G404 Micromonas commoda HOM05D003982 ORTHO05D004831 2.9e-07 58.5 82 39.0
PRCOL_00003646 Prasinoderma coloniale HOM05D003982 ORTHO05D004831 6.5e-07 57.4 66 47.0
Cre06.g260100 Chlamydomonas reinhardtii HOM05D003982 ORTHO05D004831 3.2e-06 55.1 51 54.9


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