Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD04G1242500 Malus domestica HOM05D015853 ORTHO05D000119 2.8e-84 315.1 145 100.0
MD04G1243000 Malus domestica HOM05D015853 ORTHO05D000119 2.8e-84 315.1 145 100.0
MD00G1207200 Malus domestica HOM05D015853 ORTHO05D000119 1.4e-83 312.8 145 99.3
MD04G1242900 Malus domestica HOM05D015853 ORTHO05D000119 5.4e-75 284.3 143 91.6
MD00G1207100 Malus domestica HOM05D015853 ORTHO05D000119 7.0e-75 283.9 143 90.9
MD04G1242200 Malus domestica HOM05D015853 ORTHO05D000119 8.1e-63 243.8 145 80.7
Prupe.4G273700 Prunus persica HOM05D015853 ORTHO05D000119 1.1e-24 117.1 131 45.8
MD15G1135600 Malus domestica HOM05D015853 ORTHO05D000119 5.6e-24 114.8 138 45.7
FAN19G2757 Fragaria x ananassa HOM05D000256 ORTHO05D000119 3.2e-19 99.0 135 40.0
CSS0039783 Camellia sinensis var. sinensis HOM05D000256 ORTHO05D000119 3.3e-16 89.0 112 42.0
MD06G1007800 Malus domestica HOM05D015853 ORTHO05D000119 7.7e-13 77.8 138 36.2
PGR083G1396 Punica granatum HOM05D000256 ORTHO05D000119 7.7e-13 77.8 135 36.3
MD06G1010600 Malus domestica HOM05D000256 ORTHO05D000119 3.8e-12 75.5 116 38.8
BraA03t09878Z Brassica rapa HOM05D000256 ORTHO05D000119 9.4e-11 70.9 116 39.7
AT4G16195 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 1.2e-10 70.5 121 37.2
Ciclev10007065m.g Citrus clementina HOM05D000256 ORTHO05D000119 1.2e-10 70.5 148 31.8
RcHm_v2.0_Chr4g0397211 Rosa chinensis HOM05D000256 ORTHO05D000119 1.8e-09 66.6 137 32.8
Carub.0006s1058 Capsella rubella HOM05D000256 ORTHO05D000119 2.3e-09 66.2 116 35.3
Nn1g08794 Nelumbo nucifera HOM05D000256 ORTHO05D000119 3.0e-09 65.9 113 29.2
Sed0024573 Sechium edule HOM05D000256 ORTHO05D000119 8.8e-09 64.3 135 31.1
Manes.03G153600 Manihot esculenta HOM05D000256 ORTHO05D000119 1.5e-08 63.5 133 31.6
Prupe.1G026600 Prunus persica HOM05D000256 ORTHO05D000119 3.3e-08 62.4 113 33.6
Ciclev10026952m.g Citrus clementina HOM05D000256 ORTHO05D000119 4.3e-08 62.0 114 33.3
AL6G22850 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 7.4e-08 61.2 138 29.7
MELO3C030137.2 Cucumis melo HOM05D000256 ORTHO05D000119 7.4e-08 61.2 117 32.5
MD09G1134100 Malus domestica HOM05D000256 ORTHO05D000119 9.7e-08 60.8 112 33.9
AT5G12060 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 1.3e-07 60.5 115 31.3
Thhalv10015390m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 1.7e-07 60.1 113 31.9
BolC3t13132H Brassica oleracea HOM05D000256 ORTHO05D000119 2.2e-07 59.7 117 32.5
BcaC02g12403 Brassica carinata HOM05D000256 ORTHO05D000119 2.8e-07 59.3 144 31.9
Thhalv10015241m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 2.8e-07 59.3 114 34.2
AT5G12070 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 3.7e-07 58.9 138 31.2
Thhalv10022389m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 4.8e-07 58.5 127 33.9
Prupe.1G058100 Prunus persica HOM05D000256 ORTHO05D000119 4.8e-07 58.5 150 33.3
Aa31LG10G5940 Aethionema arabicum HOM05D000256 ORTHO05D000119 6.3e-07 58.2 113 33.6
A03p05380 Brassica napus HOM05D000256 ORTHO05D000119 8.2e-07 57.8 113 31.9
BraA03t09877Z Brassica rapa HOM05D000256 ORTHO05D000119 8.2e-07 57.8 113 31.9
CARHR259490 Cardamine hirsuta HOM05D000256 ORTHO05D000119 1.4e-06 57.0 115 31.3
CANSAT35G0230 Cannabis sativa HOM05D000256 ORTHO05D000119 1.8e-06 56.6 111 29.7
GSVIVG01014872001 Vitis vinifera HOM05D000256 ORTHO05D000119 1.8e-06 56.6 133 30.8
AL6G22860 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 4.1e-06 55.5 116 30.2
C03p06210 Brassica napus HOM05D000256 ORTHO05D000119 4.1e-06 55.5 113 31.0
BolC3t13128H Brassica oleracea HOM05D000256 ORTHO05D000119 4.1e-06 55.5 113 31.0
CARHR092330 Cardamine hirsuta HOM05D000256 ORTHO05D000119 4.1e-06 55.5 115 33.0
BcaB04g18362 Brassica carinata HOM05D000256 ORTHO05D000119 5.3e-06 55.1 138 29.7
MELO3C024072.2 Cucumis melo HOM05D000256 ORTHO05D000119 5.3e-06 55.1 117 30.8
Manes.03G153800 Manihot esculenta HOM05D000256 ORTHO05D000119 6.9e-06 54.7 133 27.8
TPR.G37398 Trifolium pratense HOM05D000256 ORTHO05D000119 6.9e-06 54.7 114 28.1


User provided reference genes

Program Settings