Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 4.9e-64 247.7 127 100.0
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 7.3e-60 233.8 127 95.3
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 1.3e-48 196.4 139 78.4
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.3e-40 169.9 120 72.5
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 8.4e-40 167.2 129 69.8
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 8.4e-40 167.2 129 69.8
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 1.1e-39 166.8 91 89.0
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 1.4e-39 166.4 131 69.5
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.9e-39 166.0 129 69.0
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.4e-39 165.6 129 69.0
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.2e-39 164.9 130 68.5
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 5.4e-39 164.5 140 65.7
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 1.2e-38 163.3 93 83.9
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 1.6e-38 162.9 115 73.9
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 2.1e-38 162.5 135 65.2
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 3.5e-38 161.8 92 84.8
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 3.5e-38 161.8 92 84.8
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 4.6e-38 161.4 137 64.2
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 7.9e-38 160.6 115 70.4
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.0e-37 160.2 137 64.2
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 1.3e-37 159.8 94 81.9
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.3e-37 159.8 94 86.2
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 1.8e-37 159.5 100 78.0
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 1.8e-37 159.5 101 79.2
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 2.3e-37 159.1 126 68.3
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.3e-37 159.1 124 67.7
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 3.9e-37 158.3 100 77.0
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 3.9e-37 158.3 100 77.0
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 3.9e-37 158.3 100 77.0
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 3.9e-37 158.3 100 77.0
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 3.9e-37 158.3 131 67.2
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 5.1e-37 157.9 92 83.7
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 5.1e-37 157.9 124 67.7
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 5.1e-37 157.9 100 79.0
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 6.7e-37 157.5 95 78.9
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 6.7e-37 157.5 133 63.2
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 6.7e-37 157.5 124 67.7
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 8.7e-37 157.1 126 65.9
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 8.7e-37 157.1 133 64.7
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 1.5e-36 156.4 94 84.0
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 1.9e-36 156.0 92 82.6
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 1.9e-36 156.0 91 81.3
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 3.3e-36 155.2 92 81.5
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 3.3e-36 155.2 135 62.2
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 3.3e-36 155.2 135 63.0
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 3.3e-36 155.2 124 70.2
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 3.3e-36 155.2 115 68.7
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 3.3e-36 155.2 96 79.2
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 5.6e-36 154.5 89 82.0
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 5.6e-36 154.5 123 65.0
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 9.6e-36 153.7 128 64.8
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 9.6e-36 153.7 113 70.8
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 9.6e-36 153.7 92 82.6
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 1.3e-35 153.3 95 84.2
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 1.6e-35 152.9 139 59.7
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.6e-35 152.9 100 74.0
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 2.1e-35 152.5 100 75.0
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 2.1e-35 152.5 100 75.0
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 2.1e-35 152.5 119 64.7
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 2.8e-35 152.1 95 76.8
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 2.8e-35 152.1 111 70.3
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 3.7e-35 151.8 89 80.9
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 6.2e-35 151.0 112 66.1
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 8.1e-35 150.6 142 59.9
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 8.1e-35 150.6 128 64.8
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 1.4e-34 149.8 109 70.6
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 1.8e-34 149.4 91 78.0
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 1.8e-34 149.4 92 77.2
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 1.8e-34 149.4 115 67.0
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 3.1e-34 148.7 89 78.7
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 4.0e-34 148.3 98 74.5
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 4.0e-34 148.3 91 78.0
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 5.3e-34 147.9 86 82.6
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 5.3e-34 147.9 127 62.2
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 5.3e-34 147.9 89 78.7
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 6.9e-34 147.5 136 60.3
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 6.9e-34 147.5 111 69.4
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 9.0e-34 147.1 123 65.0
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 1.2e-33 146.7 91 76.9
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 1.5e-33 146.4 113 64.6
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 2.6e-33 145.6 133 62.4
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 3.4e-33 145.2 129 62.8
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 3.4e-33 145.2 83 80.7
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 5.8e-33 144.4 82 84.1
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 5.8e-33 144.4 106 69.8
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 5.8e-33 144.4 120 63.3
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 7.6e-33 144.1 83 81.9
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 9.9e-33 143.7 106 67.9
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 2.2e-32 142.5 82 82.9
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 2.9e-32 142.1 82 82.9
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 2.9e-32 142.1 92 72.8
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 1.4e-31 139.8 82 81.7
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 4.2e-31 138.3 110 64.5
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 4.2e-31 138.3 129 55.8
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 3.5e-30 135.2 84 76.2
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 4.6e-30 134.8 83 78.3
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 6.0e-30 134.4 84 76.2
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 8.7e-29 130.6 88 68.2
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 1.1e-28 130.2 97 70.1
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 1.5e-28 129.8 117 61.5
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 4.8e-27 124.8 85 71.8
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 1.5e-25 119.8 84 71.4
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 1.1e-23 113.6 110 59.1
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 2.6e-17 92.4 45 91.1
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 1.2e-14 83.6 45 82.2
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 1.7e-08 63.2 39 76.9
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 1.1e-07 60.5 89 46.1


User provided reference genes

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