Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD04G1125500 Malus domestica HOM05D008555 ORTHO05D010760 0.0e+00 1131.7 595 100.0
Prupe.6G252400 Prunus persica HOM05D008555 ORTHO05D010760 1.5e-200 703.4 560 69.6
FAN05G3093 Fragaria x ananassa HOM05D008555 ORTHO05D010760 7.9e-157 558.1 601 56.7
FvH4_6g14100 Fragaria vesca HOM05D008555 ORTHO05D010760 9.7e-155 551.2 601 56.2
RcHm_v2.0_Chr3g0467001 Rosa chinensis HOM05D008555 ORTHO05D010760 3.2e-150 536.2 569 57.3
FAN02G2195 Fragaria x ananassa HOM05D008555 ORTHO05D010760 9.4e-134 481.5 601 51.4
FAN09G2752 Fragaria x ananassa HOM05D008555 ORTHO05D010760 3.0e-132 476.5 601 51.1
Cfa017405 Carpinus fangiana HOM05D008555 ORTHO05D010760 5.8e-107 392.5 762 39.2
QL07p031190 Quercus lobata HOM05D008555 ORTHO05D010760 6.2e-101 372.5 623 41.7
QL07p047905 Quercus lobata HOM05D008555 ORTHO05D010760 2.0e-99 367.5 623 41.4
Dinv37190 Davidia involucrata HOM05D008555 ORTHO05D010760 1.1e-89 335.1 703 37.4
GSVIVG01034198001 Vitis vinifera HOM05D008555 ORTHO05D010760 1.7e-87 327.8 610 40.5
Haze_20761 Corylus avellana HOM05D008555 ORTHO05D010760 5.1e-87 326.2 947 32.3
CSS0010375 Camellia sinensis var. sinensis HOM05D008555 ORTHO05D010760 1.6e-69 268.1 652 34.5
FAN14G0987 Fragaria x ananassa HOM05D008555 ORTHO05D010760 1.1e-68 265.4 389 48.8
Thecc.05G042000 Theobroma cacao HOM05D008555 ORTHO05D010760 1.2e-67 261.9 600 37.2
Duzib093G2048 Durio zibethinus HOM05D008555 ORTHO05D010760 4.2e-65 253.4 617 35.7
Rhsim05G0190300 Rhododendron simsii HOM05D008555 ORTHO05D010760 6.7e-63 246.1 668 33.4
Gohir.D09G152600 Gossypium hirsutum HOM05D008555 ORTHO05D010760 4.3e-62 243.4 597 34.8
Manes.08G133801 Manihot esculenta HOM05D008555 ORTHO05D010760 1.4e-60 238.4 574 35.7
Eucgr.A01250 Eucalyptus grandis HOM05D008555 ORTHO05D010760 1.8e-60 238.0 508 36.2
Gohir.A09G157300 Gossypium hirsutum HOM05D008555 ORTHO05D010760 5.3e-60 236.5 595 33.6
Nn2g12801 Nelumbo nucifera HOM05D008555 ORTHO05D010760 1.9e-57 228.0 609 34.5
TAR623G0003 Trochodendron aralioides HOM05D008555 ORTHO05D010760 1.2e-56 225.3 625 33.4
MBI05_g06539_MAGBIO Magnolia biondii HOM05D008555 ORTHO05D010760 5.3e-52 209.9 398 38.7
Migut.J00343 Erythranthe guttata HOM05D008555 ORTHO05D010760 2.2e-45 188.0 593 30.0
Hund09315 Selenicereus undatus HOM05D008555 ORTHO05D010760 2.8e-45 187.6 291 40.2
Cc06_g02800 Coffea canephora HOM05D008555 ORTHO05D010760 2.4e-44 184.5 197 45.2
Lsat_1_v5_gn_8_82700 Lactuca sativa HOM05D008555 ORTHO05D010760 1.2e-43 182.2 513 31.4
Aqoxy4G02966 Aquilegia oxysepala HOM05D008555 ORTHO05D010760 4.5e-43 180.3 465 32.3
Sc20g0004840 Simmondsia chinensis HOM05D008555 ORTHO05D010760 5.9e-43 179.9 395 35.4
SalBow3G1082 Salvia bowleyana HOM05D008555 ORTHO05D010760 5.0e-42 176.8 407 33.7
SGA_v2.0_scaffold126G33802 Striga asiatica HOM05D008555 ORTHO05D010760 7.2e-41 172.9 410 32.0
ECA236G1276 Erigeron canadensis HOM05D008555 ORTHO05D010760 6.1e-40 169.9 392 33.9
HPP92_014313 Vanilla planifolia HOM05D008555 ORTHO05D010760 1.8e-39 168.3 440 30.2
HanXRQChr04g0124781 Helianthus annuus HOM05D008555 ORTHO05D010760 6.7e-39 166.4 457 31.9
vmacro20136 Vaccinium macrocarpon HOM05D008555 ORTHO05D010760 9.1e-36 156.0 453 30.5
PSO384G5088 Papaver somniferum HOM05D008555 ORTHO05D010760 5.9e-35 153.3 626 29.6
AUR62019574 Chenopodium quinoa HOM05D008555 ORTHO05D010760 7.9e-32 142.9 584 28.6
PSO339G2550 Papaver somniferum HOM05D008555 ORTHO05D010760 2.3e-31 141.4 525 29.9
AUR62042775 Chenopodium quinoa HOM05D008555 ORTHO05D010760 3.0e-31 141.0 598 30.3
EL10Ac1g01982 Beta vulgaris HOM05D008555 ORTHO05D010760 1.1e-30 139.0 569 29.5
Lsat_1_v5_gn_3_51821 Lactuca sativa HOM05D008555 ORTHO05D010760 1.1e-28 132.5 148 47.3
Gorai.006G174100 Gossypium raimondii HOM05D008555 ORTHO05D010760 1.3e-26 125.6 494 28.9
COL.COLO4_14830 Corchorus olitorius HOM05D008555 ORTHO05D010760 6.3e-21 106.7 665 25.3
Oeu024357.1 Olea europaea HOM05D008555 ORTHO05D010760 1.7e-13 82.0 489 28.8


User provided reference genes

Program Settings