Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 1.8e-134 482.6 250 100.0
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 5.5e-128 461.1 250 94.4
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 1.0e-121 440.3 248 89.1
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.1e-120 436.8 248 85.9
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 5.6e-120 434.5 245 89.0
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 5.6e-120 434.5 248 86.3
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 4.7e-119 431.4 248 85.5
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 1.8e-118 429.5 248 84.7
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.8e-118 429.5 248 85.9
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 3.0e-118 428.7 248 85.9
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 3.0e-118 428.7 248 85.5
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 5.7e-117 424.5 248 84.3
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 7.5e-117 424.1 247 85.0
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 1.3e-116 423.3 243 86.0
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.7e-116 422.9 245 83.7
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 2.2e-116 422.5 247 84.2
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 6.4e-116 421.0 248 82.3
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 3.2e-115 418.7 248 81.5
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 9.2e-115 417.2 240 86.2
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.6e-114 416.4 242 85.1
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 2.7e-114 415.6 245 86.9
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 3.5e-114 415.2 248 82.3
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 3.5e-114 415.2 248 80.6
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 4.6e-114 414.8 242 85.1
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 5.9e-114 414.5 245 84.9
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 7.8e-114 414.1 246 83.3
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 1.3e-113 413.3 248 81.9
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 5.0e-113 411.4 248 79.4
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 5.0e-113 411.4 248 79.4
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 6.6e-113 411.0 247 82.2
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 6.6e-113 411.0 248 80.2
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 6.6e-113 411.0 248 80.2
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 1.5e-112 409.8 242 83.5
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 2.5e-112 409.1 245 80.8
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 3.3e-112 408.7 242 81.8
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 3.3e-112 408.7 248 79.8
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 4.3e-112 408.3 242 81.8
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 7.3e-112 407.5 248 78.6
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 7.3e-112 407.5 248 78.6
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 7.3e-112 407.5 248 78.6
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 7.3e-112 407.5 248 78.2
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.2e-111 406.8 246 80.9
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 1.2e-111 406.8 244 81.1
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 1.2e-111 406.8 244 81.1
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 2.1e-111 406.0 247 78.9
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 2.1e-111 406.0 247 81.0
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 2.8e-111 405.6 248 79.4
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 3.6e-111 405.2 247 78.9
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 3.6e-111 405.2 257 78.2
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 4.7e-111 404.8 242 82.2
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 4.7e-111 404.8 246 80.9
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 4.7e-111 404.8 245 82.0
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.0e-110 403.7 247 77.3
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 1.4e-110 403.3 249 80.7
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 1.4e-110 403.3 243 81.5
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 2.3e-110 402.5 247 79.4
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 2.3e-110 402.5 245 79.2
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 3.1e-110 402.1 245 81.2
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 5.2e-110 401.4 245 80.0
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 1.2e-109 400.2 242 80.6
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 1.3e-108 396.7 247 78.1
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 1.3e-108 396.7 252 80.6
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 2.9e-108 395.6 247 76.9
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 4.9e-108 394.8 246 78.9
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 4.1e-107 391.7 245 78.0
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 4.1e-107 391.7 248 77.8
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 6.0e-106 387.9 245 79.2
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 1.3e-105 386.7 246 78.0
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 1.7e-105 386.3 264 72.3
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 3.9e-105 385.2 242 79.8
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.5e-104 383.3 250 72.8
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 2.1e-103 379.4 245 75.5
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 3.1e-102 375.6 246 76.0
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 1.2e-101 373.6 249 72.7
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 4.4e-101 371.7 234 77.8
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 2.2e-100 369.4 240 73.3
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 1.1e-99 367.1 245 73.9
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 3.0e-97 359.0 203 89.7
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 8.6e-97 357.5 246 72.0
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 1.5e-96 356.7 240 75.8
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 1.9e-96 356.3 249 70.7
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 2.8e-95 352.4 242 72.7
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 6.8e-94 347.8 228 77.6
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 6.8e-94 347.8 203 83.3
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 5.8e-93 344.7 245 70.6
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 7.6e-93 344.4 245 70.6
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 4.9e-92 341.7 213 81.2
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 1.1e-91 340.5 245 68.6
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 2.1e-90 336.3 248 65.7
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 6.0e-90 334.7 248 72.2
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.3e-89 333.6 243 69.5
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 4.3e-88 328.6 184 89.1
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 5.6e-88 328.2 198 76.8
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 2.0e-85 319.7 202 81.7
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 1.3e-84 317.0 196 74.0
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 2.1e-79 299.7 245 64.9
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 9.0e-78 294.3 263 63.9
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 5.4e-75 285.0 246 59.8
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 2.1e-71 273.1 249 54.6
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 4.2e-67 258.8 242 51.7
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 3.9e-65 252.3 202 69.3
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 1.5e-64 250.4 158 75.3
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 9.6e-64 247.7 238 53.4
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 2.0e-61 240.0 239 50.6
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 2.2e-60 236.5 242 46.7
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 1.4e-51 207.2 161 67.7
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 1.4e-51 207.2 152 69.1
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 4.2e-51 205.7 157 63.7
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 1.2e-50 204.1 152 68.4
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 3.9e-49 199.1 113 86.7
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 4.3e-48 195.7 110 87.3
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 5.7e-48 195.3 162 61.7
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 1.2e-37 161.0 119 69.7
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 1.2e-34 151.0 95 74.7
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 1.8e-33 147.1 92 78.3
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 3.0e-33 146.4 231 39.0
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.1e-32 144.4 91 74.7
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 6.1e-18 95.5 71 64.8
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 8.8e-17 91.7 166 42.2
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 4.0e-09 66.2 39 74.4
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 1.3e-07 61.2 38 81.6


User provided reference genes

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