Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD04G1038400 Malus domestica HOM05D004311 ORTHO05D005145 5.6e-194 681.0 413 100.0
Prupe.1G188800 Prunus persica HOM05D004311 ORTHO05D005145 2.3e-115 419.9 439 59.7
RcHm_v2.0_Chr4g0407521 Rosa chinensis HOM05D004311 ORTHO05D005145 6.3e-52 209.1 421 41.3
Haze_00714 Corylus avellana HOM05D004311 ORTHO05D005145 1.0e-33 148.7 436 34.4
QL10p045440 Quercus lobata HOM05D004311 ORTHO05D005145 5.3e-27 126.3 411 31.9
MD16G1211800 Malus domestica HOM05D000074 ORTHO05D005145 3.2e-24 117.1 79 78.5
FAN07G0445 Fragaria x ananassa HOM05D004311 ORTHO05D005145 3.0e-22 110.5 398 34.4
FvH4_4g11290 Fragaria vesca HOM05D004311 ORTHO05D005145 8.8e-22 109.0 272 36.4
FAN17G0085 Fragaria x ananassa HOM05D004311 ORTHO05D005145 1.5e-21 108.2 268 36.2
Ciclev10019191m.g Citrus clementina HOM05D004311 ORTHO05D005145 3.5e-18 97.1 428 29.9
Cfa015780 Carpinus fangiana HOM05D004311 ORTHO05D005145 7.2e-16 89.4 205 35.1
TWI34G1341 Tripterygium wilfordii HOM05D004311 ORTHO05D005145 1.6e-15 88.2 482 26.1
CiPaw.01G102900 Carya illinoinensis HOM05D004311 ORTHO05D005145 3.6e-15 87.0 423 27.9
Sabra07G0100500 Salix brachista HOM05D004311 ORTHO05D005145 4.0e-14 83.6 469 27.1
Dinv22688 Davidia involucrata HOM05D004311 ORTHO05D005145 1.7e-12 78.2 512 24.4
Actinidia35905 Actinidia chinensis HOM05D004311 ORTHO05D005145 6.3e-12 76.3 475 26.7
TWI60G0507 Tripterygium wilfordii HOM05D004311 ORTHO05D005145 6.3e-12 76.3 487 26.5
Gohir.D10G132100 Gossypium hirsutum HOM05D004311 ORTHO05D005145 2.4e-11 74.3 259 31.3
Manes.11G116001 Manihot esculenta HOM05D004311 ORTHO05D005145 9.2e-11 72.4 485 27.4
Atru.chr3.1596 Acer truncatum HOM05D004311 ORTHO05D005145 2.0e-10 71.2 503 27.8
Gorai.011G145800 Gossypium raimondii HOM05D004311 ORTHO05D005145 2.0e-10 71.2 259 30.9
Potri.007G124150 Populus trichocarpa HOM05D004311 ORTHO05D005145 2.7e-10 70.9 468 26.9
PGR083G0820 Punica granatum HOM05D004311 ORTHO05D005145 2.7e-10 70.9 250 29.2
CANSAT78G0609 Cannabis sativa HOM05D004311 ORTHO05D005145 5.9e-10 69.7 411 26.0
Duzib151G0942 Durio zibethinus HOM05D004311 ORTHO05D005145 5.9e-10 69.7 443 28.2
CANSAT01G2758 Cannabis sativa HOM05D004311 ORTHO05D005145 1.7e-09 68.2 400 25.8
Potri.017G036200 Populus trichocarpa HOM05D004311 ORTHO05D005145 1.7e-09 68.2 439 28.0
Thecc.04G184200 Theobroma cacao HOM05D004311 ORTHO05D005145 1.5e-08 65.1 260 29.2
Sabra17G0023900 Salix brachista HOM05D004311 ORTHO05D005145 2.5e-08 64.3 449 26.5
Gohir.A10G134400 Gossypium hirsutum HOM05D004311 ORTHO05D005145 2.8e-07 60.8 435 27.6
CSS0021437 Camellia sinensis var. sinensis HOM05D004311 ORTHO05D005145 8.0e-07 59.3 482 23.7
Eucgr.A00251 Eucalyptus grandis HOM05D004311 ORTHO05D005145 1.8e-06 58.2 291 28.2
Hma1.2p1_0429F.1_g151120 Hydrangea macrophylla HOM05D004311 ORTHO05D005145 6.8e-06 56.2 156 30.8
THA.LOC104821356 Tarenaya hassleriana HOM05D004311 ORTHO05D005145 6.8e-06 56.2 277 25.3
TAR362G0891 Trochodendron aralioides HOM05D015611 ORTHO05D005145 6.8e-06 56.2 183 28.4
Atru.chr5.2612 Acer truncatum HOM05D004311 ORTHO05D005145 8.9e-06 55.8 232 29.3
GSVIVG01013563001 Vitis vinifera HOM05D004311 ORTHO05D005145 8.9e-06 55.8 387 23.3


User provided reference genes

Program Settings