Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD04G1010200 Malus domestica HOM05D004542 ORTHO05D005380 1.0e-75 286.6 137 100.0
Prupe.1G009500 Prunus persica HOM05D004542 ORTHO05D005380 4.0e-56 221.5 139 78.4
RcHm_v2.0_Chr4g0415001 Rosa chinensis HOM05D004542 ORTHO05D005380 5.9e-47 191.0 134 69.4
TWI09G1372 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 1.1e-45 186.8 134 68.7
FvH4_4g13880 Fragaria vesca HOM05D004542 ORTHO05D005380 2.3e-43 179.1 134 65.7
FAN12G3669 Fragaria x ananassa HOM05D004542 ORTHO05D005380 2.3e-43 179.1 134 65.7
CANSAT21G2357 Cannabis sativa HOM05D004542 ORTHO05D005380 2.0e-42 176.0 137 66.4
RcHm_v2.0_Chr4g0414951 Rosa chinensis HOM05D004542 ORTHO05D005380 3.3e-42 175.3 136 64.7
TWI73G0467 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 3.3e-42 175.3 137 62.8
FAN07G0300 Fragaria x ananassa HOM05D004542 ORTHO05D005380 1.3e-41 173.3 134 64.2
FAN22G1961 Fragaria x ananassa HOM05D004542 ORTHO05D005380 6.3e-41 171.0 134 64.2
Duzib251G0803 Durio zibethinus HOM05D004542 ORTHO05D005380 1.4e-40 169.9 143 60.1
Cfa004898 Carpinus fangiana HOM05D004542 ORTHO05D005380 1.8e-40 169.5 135 63.0
Dinv07945 Davidia involucrata HOM05D004542 ORTHO05D005380 5.3e-40 167.9 136 65.4
RcHm_v2.0_Chr6g0251041 Rosa chinensis HOM05D004542 ORTHO05D005380 5.3e-40 167.9 138 64.5
CSS0014017 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 9.1e-40 167.2 143 62.9
CSS0031140 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 9.1e-40 167.2 143 62.9
THA.LOC104808670 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 1.2e-39 166.8 133 61.7
Atru.chr11.1738 Acer truncatum HOM05D004542 ORTHO05D005380 2.0e-39 166.0 125 65.6
Thecc.02G341300 Theobroma cacao HOM05D004542 ORTHO05D005380 3.4e-39 165.2 140 59.3
Manes.01G033600 Manihot esculenta HOM05D004542 ORTHO05D005380 6.5e-38 161.0 130 61.5
Cpa.g.sc69.70 Carica papaya HOM05D004542 ORTHO05D005380 8.5e-38 160.6 135 60.7
Carub.0001s2428 Capsella rubella HOM05D004542 ORTHO05D005380 2.5e-37 159.1 138 59.4
Potri.008G090100 Populus trichocarpa HOM05D004542 ORTHO05D005380 4.2e-37 158.3 138 59.4
Actinidia31969 Actinidia chinensis HOM05D004542 ORTHO05D005380 7.2e-37 157.5 120 65.8
Duzib248G0510 Durio zibethinus HOM05D004542 ORTHO05D005380 7.2e-37 157.5 141 55.3
QL05p050003 Quercus lobata HOM05D004542 ORTHO05D005380 7.2e-37 157.5 140 59.3
Aa31LG7G8390 Aethionema arabicum HOM05D004542 ORTHO05D005380 1.2e-36 156.8 124 61.3
THA.LOC104822040 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 1.6e-36 156.4 136 57.4
Peaxi162Scf00222g00329 Petunia axillaris HOM05D004542 ORTHO05D005380 2.1e-36 156.0 136 58.8
Potri.010G165100 Populus trichocarpa HOM05D004542 ORTHO05D005380 2.1e-36 156.0 129 58.1
AT1G26740 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 2.7e-36 155.6 124 61.3
Ciclev10033055m.g Citrus clementina HOM05D004542 ORTHO05D005380 2.7e-36 155.6 134 59.7
Actinidia17747 Actinidia chinensis HOM05D004542 ORTHO05D005380 3.6e-36 155.2 142 60.6
A07p13070 Brassica napus HOM05D004542 ORTHO05D005380 4.7e-36 154.8 138 54.3
C05p24230 Brassica napus HOM05D004542 ORTHO05D005380 4.7e-36 154.8 133 56.4
BcaB03g14086 Brassica carinata HOM05D004542 ORTHO05D005380 6.1e-36 154.5 134 53.7
ECA233G6069 Erigeron canadensis HOM05D004542 ORTHO05D005380 6.1e-36 154.5 135 56.3
BcaC06g35127 Brassica carinata HOM05D004542 ORTHO05D005380 7.9e-36 154.1 126 58.7
CiPaw.06G087700 Carya illinoinensis HOM05D004542 ORTHO05D005380 7.9e-36 154.1 113 65.5
BraA07t29078Z Brassica rapa HOM05D004542 ORTHO05D005380 1.0e-35 153.7 138 53.6
BolC5t31159H Brassica oleracea HOM05D004542 ORTHO05D005380 1.4e-35 153.3 133 55.6
PGR083G2602 Punica granatum HOM05D004542 ORTHO05D005380 1.4e-35 153.3 132 54.5
Nitab4.5_0000391g0330 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.8e-35 152.9 133 61.7
AL1G38970 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 2.3e-35 152.5 124 60.5
C07p19550 Brassica napus HOM05D004542 ORTHO05D005380 6.7e-35 151.0 136 54.4
BolC7t42472H Brassica oleracea HOM05D004542 ORTHO05D005380 6.7e-35 151.0 136 54.4
BraA09t39513Z Brassica rapa HOM05D004542 ORTHO05D005380 6.7e-35 151.0 133 54.9
MD13G1284400 Malus domestica HOM05D002269 ORTHO05D005380 6.7e-35 151.0 170 51.2
A09p40150 Brassica napus HOM05D004542 ORTHO05D005380 1.1e-34 150.2 133 54.9
Sp5g24560 Schrenkiella parvula HOM05D004542 ORTHO05D005380 1.1e-34 150.2 126 60.3
Gohir.A07G047800 Gossypium hirsutum HOM05D004542 ORTHO05D005380 1.5e-34 149.8 144 56.2
Nitab4.5_0013306g0010 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.5e-34 149.8 135 60.7
HanXRQChr12g0361941 Helianthus annuus HOM05D004542 ORTHO05D005380 3.3e-34 148.7 126 58.7
Thhalv10009076m.g Eutrema salsugineum HOM05D004542 ORTHO05D005380 4.4e-34 148.3 130 57.7
BcaC05g26392 Brassica carinata HOM05D004542 ORTHO05D005380 5.7e-34 147.9 133 54.1
Hma1.2p1_0357F.1_g134240 Hydrangea macrophylla HOM05D004542 ORTHO05D005380 5.7e-34 147.9 97 76.3
Gohir.D07G052100 Gossypium hirsutum HOM05D004542 ORTHO05D005380 7.4e-34 147.5 144 56.2
TAR622G0172 Trochodendron aralioides HOM05D004542 ORTHO05D005380 9.7e-34 147.1 136 56.6
Cc00_g16630 Coffea canephora HOM05D004542 ORTHO05D005380 1.3e-33 146.7 136 60.3
Gorai.001G055100 Gossypium raimondii HOM05D004542 ORTHO05D005380 1.3e-33 146.7 146 55.5
MSTRG.2336 Avicennia marina HOM05D004542 ORTHO05D005380 1.7e-33 146.4 128 59.4
Lsat_1_v5_gn_8_48901 Lactuca sativa HOM05D004542 ORTHO05D005380 1.7e-33 146.4 136 53.7
Sopen05g007930 Solanum pennellii HOM05D004542 ORTHO05D005380 2.2e-33 146.0 135 57.0
CARHR025220 Cardamine hirsuta HOM05D004542 ORTHO05D005380 4.8e-33 144.8 124 55.6
Migut.L01259 Erythranthe guttata HOM05D004542 ORTHO05D005380 4.8e-33 144.8 138 55.8
Peaxi162Scf00023g02531 Petunia axillaris HOM05D004542 ORTHO05D005380 4.8e-33 144.8 136 56.6
Sabra08G0067500 Salix brachista HOM05D004542 ORTHO05D005380 6.3e-33 144.4 150 53.3
Solyc04g005590.3 Solanum lycopersicum HOM05D004542 ORTHO05D005380 8.2e-33 144.1 137 56.9
Cpa.g.sc57.38 Carica papaya HOM05D004542 ORTHO05D005380 3.1e-32 142.1 119 59.7
CsaV3_5G032980 Cucumis sativus L. HOM05D004542 ORTHO05D005380 4.1e-32 141.7 139 54.7
MELO3C012119.2 Cucumis melo HOM05D004542 ORTHO05D005380 5.3e-32 141.4 139 56.8
Eucgr.D00185 Eucalyptus grandis HOM05D004542 ORTHO05D005380 5.3e-32 141.4 122 59.8
Sopen04g001630 Solanum pennellii HOM05D004542 ORTHO05D005380 5.3e-32 141.4 131 56.5
Glyma.05G118100 Glycine max HOM05D004542 ORTHO05D005380 1.2e-31 140.2 141 52.5
TPR.G5742 Trifolium pratense HOM05D004542 ORTHO05D005380 1.2e-31 140.2 134 56.0
AL2G28600 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 1.5e-31 139.8 125 56.8
HanXRQChr15g0476941 Helianthus annuus HOM05D004542 ORTHO05D005380 1.5e-31 139.8 120 58.3
Oeu001710.1 Olea europaea HOM05D004542 ORTHO05D005380 2.0e-31 139.4 114 59.6
ClCG05G024060 Citrullus lanatus HOM05D004542 ORTHO05D005380 3.5e-31 138.7 136 55.1
Solyc05g013190.4 Solanum lycopersicum HOM05D004542 ORTHO05D005380 5.9e-31 137.9 135 56.3
Aqoxy3G03464 Aquilegia oxysepala HOM05D004542 ORTHO05D005380 7.7e-31 137.5 135 54.8
Sc14g0007580 Simmondsia chinensis HOM05D004542 ORTHO05D005380 7.7e-31 137.5 125 59.2
CANSAT21G0056 Cannabis sativa HOM05D004542 ORTHO05D005380 1.0e-30 137.1 110 65.5
Lalb_Chr10g0097781 Lupinus albus HOM05D004542 ORTHO05D005380 1.7e-30 136.3 138 52.2
Sed0021036 Sechium edule HOM05D004542 ORTHO05D005380 2.2e-30 136.0 127 56.7
Psat0s1693g0080 Pisum sativum HOM05D004542 ORTHO05D005380 3.8e-30 135.2 136 54.4
PGSC0003DMG400002854 Solanum tuberosum HOM05D004542 ORTHO05D005380 3.8e-30 135.2 137 54.7
Nitab4.5_0001077g0020 Nicotiana tabacum HOM05D004542 ORTHO05D005380 6.5e-30 134.4 153 49.0
Glyma.08G073000 Glycine max HOM05D004542 ORTHO05D005380 8.5e-30 134.0 141 51.1
Nn3g17306 Nelumbo nucifera HOM05D004542 ORTHO05D005380 1.1e-29 133.7 139 52.5
Medtr1g025320 Medicago truncatula HOM05D004542 ORTHO05D005380 1.4e-29 133.3 136 53.7
AUR62031723 Chenopodium quinoa HOM05D004542 ORTHO05D005380 2.5e-29 132.5 138 52.9
MBI02_g20485_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 9.4e-29 130.6 133 51.1
Nn3g18387 Nelumbo nucifera HOM05D004542 ORTHO05D005380 9.4e-29 130.6 139 51.8
Sc03g0001820 Simmondsia chinensis HOM05D004542 ORTHO05D005380 9.4e-29 130.6 126 54.0
Ca_18347_v3 Cicer arietinum L. HOM05D004542 ORTHO05D005380 1.6e-28 129.8 139 51.1
COL.COLO4_32021 Corchorus olitorius HOM05D004542 ORTHO05D005380 4.7e-28 128.3 100 63.0
Haze_11968 Corylus avellana HOM05D004542 ORTHO05D005380 6.1e-28 127.9 108 59.3
Manes.05G105400 Manihot esculenta HOM05D004542 ORTHO05D005380 8.0e-28 127.5 113 60.2
SalBow1G8597 Salvia bowleyana HOM05D004542 ORTHO05D005380 8.0e-28 127.5 114 53.5
EL10Ac2g02750 Beta vulgaris HOM05D004542 ORTHO05D005380 1.0e-27 127.1 118 55.1
ECA246G0207 Erigeron canadensis HOM05D004542 ORTHO05D005380 1.0e-27 127.1 139 51.1
VMungo0251G2924 Vigna mungo HOM05D004542 ORTHO05D005380 1.8e-27 126.3 133 48.9
CDE04G0708 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 3.9e-27 125.2 131 51.1
TPR.G8852 Trifolium pratense HOM05D004542 ORTHO05D005380 3.9e-27 125.2 84 69.0
Phvul.002G208200 Phaseolus vulgaris HOM05D004542 ORTHO05D005380 1.1e-26 123.6 142 47.2
DCAR_027429 Daucus carota HOM05D004542 ORTHO05D005380 1.5e-26 123.2 189 42.3
PSO063G3361 Papaver somniferum HOM05D004542 ORTHO05D005380 3.3e-26 122.1 99 60.6
SalBow1G7833 Salvia bowleyana HOM05D004542 ORTHO05D005380 5.7e-26 121.3 114 52.6
arahy.Tifrunner.gnm1.ann1.53F0XR Arachis hypogaea HOM05D004542 ORTHO05D005380 9.7e-26 120.6 129 49.6
arahy.Tifrunner.gnm1.ann1.H527P9 Arachis hypogaea HOM05D004542 ORTHO05D005380 9.7e-26 120.6 129 49.6
Glyma.06G320500 Glycine max HOM05D004542 ORTHO05D005380 1.7e-25 119.8 94 63.8
Rhsim05G0092000 Rhododendron simsii HOM05D004542 ORTHO05D005380 1.7e-25 119.8 97 63.9
RhsimUnG0183400 Rhododendron simsii HOM05D004542 ORTHO05D005380 1.7e-25 119.8 97 63.9
Lj4g0012875 Lotus japonicus HOM05D004542 ORTHO05D005380 2.8e-25 119.0 136 50.0
Sp1g22070 Schrenkiella parvula HOM05D004542 ORTHO05D005380 6.3e-25 117.9 111 53.2
CDE07G0585 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 1.4e-24 116.7 120 52.5
SGA_v2.0_scaffold455G51899 Striga asiatica HOM05D004542 ORTHO05D005380 3.1e-24 115.5 123 52.8
Ah.08g212630 Amaranthus hybridus HOM05D004542 ORTHO05D005380 4.1e-24 115.2 127 53.5
SalBow1G4390 Salvia bowleyana HOM05D004542 ORTHO05D005380 4.1e-24 115.2 114 50.0
Lj4g0007672 Lotus japonicus HOM05D004542 ORTHO05D005380 1.6e-23 113.2 136 47.1
AUR62032610 Chenopodium quinoa HOM05D004542 ORTHO05D005380 5.9e-23 111.3 167 43.1
Hund04421 Selenicereus undatus HOM05D004542 ORTHO05D005380 1.2e-20 103.6 111 53.2
Os03g0168900 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 4.7e-20 101.7 113 51.3
AT1G69485 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 1.0e-19 100.5 50 86.0
SalBow1G1756 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.0e-19 100.5 50 84.0
Zm00001eb402400 Zea mays HOM05D004542 ORTHO05D005380 1.8e-19 99.8 119 49.6
Ciclev10013639m.g Citrus clementina HOM05D004542 ORTHO05D005380 3.0e-19 99.0 134 44.0
Os10g0407100 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 3.0e-19 99.0 57 78.9
Oeu054854.1 Olea europaea HOM05D004542 ORTHO05D005380 9.7e-18 94.0 90 58.9
Nitab4.5_0000014g0150 Nicotiana tabacum HOM05D004542 ORTHO05D005380 2.2e-17 92.8 145 42.8
Sopen03g017060 Solanum pennellii HOM05D004542 ORTHO05D005380 1.4e-16 90.1 62 62.9
PSO782G1969 Papaver somniferum HOM05D004542 ORTHO05D005380 2.7e-15 85.9 85 54.1
Carub.0002s1610 Capsella rubella HOM05D004542 ORTHO05D005380 7.7e-15 84.3 42 83.3
Mapoly0152s0024 Marchantia polymorpha HOM05D004542 ORTHO05D005380 7.7e-15 84.3 84 48.8
Pp3c1_32410 Physcomitrium patens HOM05D004542 ORTHO05D005380 1.0e-14 84.0 53 66.0
CBR_g23146 Chara braunii HOM05D004542 ORTHO05D005380 5.0e-14 81.6 50 66.0
COL.COLO4_27991 Corchorus olitorius HOM05D004542 ORTHO05D005380 5.0e-14 81.6 99 49.5
Glyma.04G115800 Glycine max HOM05D004542 ORTHO05D005380 2.5e-13 79.3 63 66.7
MBI02_g44667_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 7.2e-13 77.8 100 44.0
COL.COLO4_27990 Corchorus olitorius HOM05D004542 ORTHO05D005380 1.2e-12 77.0 80 52.5
vmacro01351 Vaccinium macrocarpon HOM05D004542 ORTHO05D005380 3.6e-12 75.5 88 54.5
Sabra10G0125700 Salix brachista HOM05D004542 ORTHO05D005380 4.7e-12 75.1 96 46.9
AagrBONN_evm.TU.Sc2ySwM_228.5417 Anthoceros agrestis HOM05D004542 ORTHO05D005380 1.0e-11 73.9 52 65.4
SMO358G0607 Selaginella moellendorffii HOM05D000228 ORTHO05D005112 4.0e-11 72.0 49 61.2
Zm00001eb005320 Zea mays HOM05D004542 ORTHO05D005380 1.3e-09 67.0 93 47.3
PGSC0003DMG400005564 Solanum tuberosum HOM05D004542 ORTHO05D005380 4.8e-09 65.1 85 47.1
MCO02G272 Micromonas commoda HOM05D004542 ORTHO05D005380 4.1e-08 62.0 50 56.0
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 2.7e-07 59.3 37 70.3


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