Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 3.1e-153 545.0 262 100.0
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 2.7e-141 505.4 265 91.3
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 5.3e-121 438.0 269 77.7
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 5.5e-94 348.2 265 65.3
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 3.3e-91 339.0 256 66.4
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 6.3e-90 334.7 252 63.9
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 6.3e-90 334.7 252 63.9
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 2.6e-88 329.3 252 63.1
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 1.9e-86 323.2 253 63.6
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 2.5e-86 322.8 258 64.0
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.6e-85 320.1 252 64.7
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 8.8e-84 314.3 252 60.7
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 2.0e-83 313.2 252 61.5
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 2.6e-83 312.8 259 59.1
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 4.4e-83 312.0 252 61.9
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 9.7e-83 310.8 265 58.5
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 2.2e-82 309.7 265 59.6
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 2.8e-82 309.3 254 60.6
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 3.7e-82 308.9 256 60.5
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 3.7e-82 308.9 252 61.1
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 2.4e-81 306.2 257 60.3
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.4e-78 297.0 252 59.9
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 3.2e-78 295.8 271 56.8
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 3.2e-78 295.8 366 45.1
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 9.4e-78 294.3 256 56.6
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 1.0e-76 290.8 241 61.0
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 5.2e-76 288.5 249 56.6
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 2.0e-75 286.6 258 57.4
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 4.4e-75 285.4 253 56.9
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 4.4e-75 285.4 261 54.4
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 5.7e-75 285.0 258 54.3
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 2.2e-74 283.1 254 56.7
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 2.8e-74 282.7 258 54.3
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 1.8e-73 280.0 263 54.8
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 2.4e-73 279.6 258 55.0
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 2.4e-73 279.6 252 54.4
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 9.1e-73 277.7 265 54.0
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 1.6e-72 276.9 252 54.0
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 5.9e-72 275.0 275 51.6
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 7.7e-72 274.6 241 59.3
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 1.0e-71 274.2 253 54.9
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 1.7e-71 273.5 254 55.1
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 2.1e-69 266.5 257 52.9
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 4.7e-69 265.4 211 61.1
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 1.0e-68 264.2 261 52.1
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 8.8e-68 261.2 249 53.8
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 1.5e-67 260.4 199 63.8
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 2.0e-67 260.0 258 52.7
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 2.8e-66 256.1 262 51.9
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 6.3e-66 255.0 253 49.4
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 1.1e-65 254.2 247 54.3
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 1.4e-65 253.8 257 54.5
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 3.1e-65 252.7 322 44.4
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 2.7e-64 249.6 252 51.6
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 2.7e-64 249.6 259 48.6
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 7.7e-64 248.1 253 49.4
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 7.7e-64 248.1 253 51.0
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 1.0e-63 247.7 259 49.8
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 1.3e-63 247.3 253 47.8
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 6.5e-63 245.0 249 49.4
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 6.5e-63 245.0 258 47.7
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 3.6e-61 239.2 237 48.5
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 4.7e-61 238.8 259 47.5
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 6.1e-61 238.4 241 48.1
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 5.2e-60 235.3 331 42.9
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 1.5e-59 233.8 245 50.2
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 2.0e-59 233.4 237 49.8
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 2.0e-59 233.4 231 51.9
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 2.8e-58 229.6 252 47.2
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 3.7e-58 229.2 197 58.4
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 5.4e-57 225.3 261 44.8
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 7.0e-57 224.9 242 49.6
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 9.1e-57 224.6 177 62.1
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 9.1e-57 224.6 197 56.3
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 2.0e-56 223.4 263 46.8
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 3.5e-56 222.6 258 45.3
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 3.5e-56 222.6 258 45.3
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 3.5e-56 222.6 258 45.3
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 5.9e-56 221.9 182 57.7
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 2.5e-54 216.5 286 42.3
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 4.0e-52 209.1 239 47.7
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 8.9e-52 208.0 238 42.0
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 1.5e-51 207.2 243 45.3
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 2.0e-51 206.8 252 44.4
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 6.3e-50 201.8 252 43.7
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.0e-47 194.5 200 50.0
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 4.7e-45 185.7 252 43.7
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.4e-44 184.1 252 44.0
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 8.9e-44 181.4 263 42.6
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 2.2e-42 176.8 143 55.9
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 1.5e-38 164.1 239 40.2
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 1.3e-34 151.0 147 56.5
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 1.2e-29 134.4 158 47.5
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 2.6e-27 126.7 253 35.6
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 4.4e-27 125.9 173 42.8
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 7.6e-27 125.2 268 31.7
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 8.6e-23 111.7 201 31.8
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 1.5e-22 110.9 216 38.0
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 3.3e-22 109.8 265 30.2
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 2.0e-19 100.5 137 40.9
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 9.9e-19 98.2 169 34.9
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 1.2e-16 91.3 250 28.0
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 2.4e-12 77.0 76 50.0
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 2.2e-10 70.5 116 36.2


User provided reference genes

Program Settings