Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 1.2e-261 906.0 463 100.0
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 1.2e-152 543.9 483 61.1
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.2e-146 523.1 487 59.3
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 2.4e-145 519.6 412 70.9
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.9e-138 496.1 488 57.0
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 3.0e-119 433.0 466 53.0
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 2.4e-116 423.3 420 57.1
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 2.5e-97 360.1 475 46.7
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 7.9e-88 328.6 502 43.6
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 3.3e-86 323.2 500 43.4
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 2.2e-85 320.5 501 43.5
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 7.0e-84 315.5 500 41.6
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 6.7e-79 298.9 511 39.9
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 3.3e-78 296.6 499 41.9
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 7.5e-78 295.4 500 40.6
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 6.3e-77 292.4 481 41.0
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 1.1e-76 291.6 548 37.8
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 2.4e-76 290.4 331 52.3
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 4.1e-76 289.7 473 41.9
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 6.5e-74 282.3 396 45.2
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 8.5e-74 282.0 518 39.6
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 2.1e-72 277.3 574 36.1
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 2.2e-66 257.3 501 38.3
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 4.9e-61 239.6 466 37.6
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 6.3e-61 239.2 500 36.2
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 3.5e-59 233.4 422 37.9
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 2.5e-57 227.3 239 53.6
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 5.6e-57 226.1 489 36.0
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 7.3e-57 225.7 495 34.9
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 1.6e-56 224.6 515 35.0
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 2.1e-56 224.2 499 37.1
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 3.6e-56 223.4 406 37.7
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 5.7e-54 216.1 412 37.4
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 1.1e-52 211.8 461 36.2
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 5.4e-52 209.5 456 36.6
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 1.6e-51 208.0 330 42.1
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 3.5e-51 206.8 507 34.9
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 5.9e-51 206.1 487 34.7
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 5.9e-51 206.1 480 35.6
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 7.8e-51 205.7 291 43.3
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 1.3e-50 204.9 486 35.0
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 1.2e-48 198.4 416 35.6
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 6.2e-48 196.1 500 31.8
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 1.8e-47 194.5 483 34.0
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 2.0e-46 191.0 303 41.9
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 3.7e-45 186.8 292 44.5
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 1.1e-44 185.3 472 34.1
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 1.9e-41 174.5 504 29.4
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 3.3e-41 173.7 478 33.9
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 5.6e-41 172.9 340 38.2
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 2.6e-38 164.1 492 32.1
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 7.5e-38 162.5 525 29.9
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 1.7e-37 161.4 374 35.3
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 3.2e-36 157.1 407 32.9
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 3.5e-35 153.7 484 30.0
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 6.0e-35 152.9 525 30.9
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 7.8e-35 152.5 494 30.6
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 1.7e-34 151.4 490 32.0
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 2.5e-33 147.5 394 33.5
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 3.3e-33 147.1 483 29.2
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 2.1e-32 144.4 290 35.2
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 3.6e-32 143.7 420 30.2
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 6.2e-32 142.9 440 30.7
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 3.1e-31 140.6 366 32.5
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 3.1e-31 140.6 255 39.6
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 5.2e-31 139.8 191 44.0
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 6.8e-31 139.4 377 32.1
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 1.5e-30 138.3 334 35.9
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 2.0e-30 137.9 487 29.6
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 4.4e-30 136.7 398 33.2
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 3.8e-29 133.7 357 32.5
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 3.2e-28 130.6 369 31.7
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 7.1e-28 129.4 373 31.9
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 7.8e-27 125.9 474 29.5
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 2.5e-25 120.9 375 31.2
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 2.5e-25 120.9 388 30.2
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 5.6e-25 119.8 200 42.5
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 9.6e-25 119.0 502 28.9
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 4.7e-24 116.7 158 41.1
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 6.2e-24 116.3 364 29.7
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 9.0e-23 112.5 345 31.0
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.3e-21 108.6 128 38.3
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 1.3e-21 108.6 380 29.2
DCAR_005809 Daucus carota HOM05D007164 ORTHO05D008802 2.2e-21 107.8 297 32.0
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 4.9e-21 106.7 482 25.7
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 8.4e-21 105.9 276 31.5
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 2.4e-20 104.4 453 28.0
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 4.2e-20 103.6 221 32.6
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 4.2e-20 103.6 451 27.5
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 4.2e-20 103.6 335 31.0
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 1.3e-18 98.6 364 26.6
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 3.0e-18 97.4 96 50.0
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 3.3e-17 94.0 269 32.7
Duzib138G1663 Durio zibethinus HOM05D007164 ORTHO05D008802 2.1e-16 91.3 177 39.5
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 4.8e-16 90.1 389 27.5
CiPaw.07G104400 Carya illinoinensis HOM05D007164 ORTHO05D008802 3.4e-14 84.0 165 36.4
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 9.9e-14 82.4 190 34.7
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 3.2e-12 77.4 383 28.2
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 2.1e-11 74.7 100 34.0
Mapoly0046s0035 Marchantia polymorpha HOM05D007164 ORTHO05D008802 6.7e-10 69.7 214 26.2
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 8.7e-10 69.3 162 29.6
EL10Ac7g17490 Beta vulgaris HOM05D007164 ORTHO05D008802 1.1e-09 68.9 289 25.6
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 1.8e-07 61.6 155 25.8
Glyma.20G061700 Glycine max HOM05D007164 ORTHO05D008802 4.5e-06 57.0 298 27.2


User provided reference genes

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