Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 2.6e-36 154.8 77 100.0
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 6.2e-30 133.7 77 85.7
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 2.5e-26 121.7 77 80.5
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 1.3e-24 115.9 72 76.4
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 3.0e-24 114.8 72 76.4
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 3.0e-24 114.8 72 76.4
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 6.7e-24 113.6 75 76.0
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 8.7e-24 113.2 72 75.0
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 8.7e-24 113.2 72 76.4
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 1.1e-23 112.8 72 76.4
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 1.9e-23 112.1 69 75.4
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 2.5e-23 111.7 72 75.0
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 4.3e-23 110.9 72 73.6
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 5.7e-23 110.5 72 75.0
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 5.7e-23 110.5 73 72.6
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 1.6e-22 109.0 72 73.6
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 1.6e-22 109.0 69 73.9
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 2.1e-22 108.6 73 68.5
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 2.1e-22 108.6 73 69.9
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 2.1e-22 108.6 69 72.5
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 2.1e-22 108.6 69 75.4
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 2.1e-22 108.6 70 71.4
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 3.7e-22 107.8 72 69.4
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 3.7e-22 107.8 73 71.2
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 4.8e-22 107.5 73 68.5
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 4.8e-22 107.5 66 74.2
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 6.3e-22 107.1 70 74.3
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 6.3e-22 107.1 68 72.1
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 6.3e-22 107.1 70 71.4
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 1.1e-21 106.3 72 75.0
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 1.4e-21 105.9 70 70.0
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 2.4e-21 105.1 75 68.0
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 3.1e-21 104.8 69 71.0
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 3.1e-21 104.8 71 70.4
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 4.1e-21 104.4 75 69.3
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 4.1e-21 104.4 72 68.1
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 4.1e-21 104.4 72 68.1
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 5.3e-21 104.0 71 69.0
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 5.3e-21 104.0 75 69.3
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 1.2e-20 102.8 69 66.7
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 1.5e-20 102.4 65 75.4
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 1.5e-20 102.4 72 66.7
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 1.5e-20 102.4 72 72.2
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 2.0e-20 102.1 72 68.1
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 2.6e-20 101.7 69 68.1
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 2.6e-20 101.7 72 68.1
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 2.6e-20 101.7 70 67.1
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 3.4e-20 101.3 70 67.1
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 1.0e-19 99.8 72 68.1
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 1.0e-19 99.8 68 63.2
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 1.0e-19 99.8 75 64.0
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 1.0e-19 99.8 62 75.8
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 1.7e-19 99.0 76 65.8
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 1.7e-19 99.0 70 67.1
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 2.9e-19 98.2 72 66.7
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 3.8e-19 97.8 61 75.4
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 5.0e-19 97.4 69 62.3
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 6.5e-19 97.1 71 64.8
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 2.5e-18 95.1 72 62.5
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 2.5e-18 95.1 63 71.4
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 3.2e-18 94.7 65 70.8
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 4.2e-18 94.4 72 62.5
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 4.2e-18 94.4 72 62.5
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 5.5e-18 94.0 72 62.5
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 9.3e-18 93.2 56 75.0
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 1.2e-17 92.8 76 61.8
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 1.6e-17 92.4 62 66.1
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 2.1e-17 92.0 72 59.7
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 2.1e-17 92.0 70 60.0
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 2.7e-17 91.7 62 64.5
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 3.6e-17 91.3 62 64.5
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 3.6e-17 91.3 64 73.4
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 3.6e-17 91.3 69 59.4
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 6.1e-17 90.5 70 65.7
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 7.9e-17 90.1 72 58.3
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 7.9e-17 90.1 66 65.2
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 1.0e-16 89.7 72 58.3
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 1.0e-16 89.7 61 73.8
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 3.0e-16 88.2 72 56.9
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 6.7e-16 87.0 71 56.3
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 1.9e-15 85.5 56 67.9
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 1.9e-15 85.5 59 66.1
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 2.5e-15 85.1 64 65.6
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 1.3e-14 82.8 50 78.0
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 2.2e-14 82.0 62 59.7
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 3.7e-14 81.3 72 54.2
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 3.7e-14 81.3 72 55.6
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 3.7e-14 81.3 72 55.6
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 4.8e-14 80.9 59 62.7
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 4.8e-14 80.9 59 62.7
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 6.3e-14 80.5 62 56.5
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 1.1e-13 79.7 50 76.0
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 1.8e-13 79.0 56 64.3
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 2.4e-13 78.6 50 76.0
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 6.9e-13 77.0 44 81.8
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 6.9e-13 77.0 49 71.4
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 7.7e-12 73.6 56 57.1
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 6.5e-11 70.5 51 56.9
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 7.2e-10 67.0 45 60.0
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 2.0e-07 58.9 46 58.7
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 2.6e-07 58.5 46 50.0


User provided reference genes

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