Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 7.0e-107 390.6 189 100.0
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 3.1e-91 338.6 181 89.5
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.3e-81 305.8 182 81.9
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 5.0e-81 304.7 182 81.3
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.6e-79 298.5 182 79.7
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.6e-79 298.5 182 79.1
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 6.8e-78 294.3 168 80.4
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 2.0e-77 292.7 159 81.8
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 2.6e-77 292.4 169 79.9
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 5.7e-77 291.2 158 82.9
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 9.8e-77 290.4 182 74.7
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 9.8e-77 290.4 159 82.4
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 9.8e-77 290.4 166 81.3
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 1.3e-76 290.0 169 78.7
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 2.2e-76 289.3 159 83.6
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 2.8e-76 288.9 169 78.1
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 2.8e-76 288.9 169 78.1
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 6.3e-76 287.7 159 80.5
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 1.4e-75 286.6 181 74.6
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.8e-75 286.2 159 80.5
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 2.4e-75 285.8 159 81.1
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 2.4e-75 285.8 166 78.9
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 3.1e-75 285.4 158 80.4
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 4.1e-75 285.0 180 73.9
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 4.1e-75 285.0 159 81.1
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 5.4e-75 284.6 158 79.7
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 7.0e-75 284.3 158 79.7
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 9.2e-75 283.9 164 76.8
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 9.2e-75 283.9 180 75.0
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 1.2e-74 283.5 159 81.8
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 3.5e-74 282.0 178 75.3
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 4.5e-74 281.6 158 78.5
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 4.5e-74 281.6 162 80.2
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 4.5e-74 281.6 169 77.5
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 7.8e-74 280.8 173 75.7
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 1.0e-73 280.4 176 73.3
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 1.0e-73 280.4 165 77.6
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 1.7e-73 279.6 172 76.7
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 2.3e-73 279.3 165 77.6
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 5.0e-73 278.1 159 75.5
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 6.6e-73 277.7 178 73.6
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 6.6e-73 277.7 158 77.2
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 8.6e-73 277.3 178 73.6
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 1.1e-72 276.9 157 80.3
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 1.1e-72 276.9 163 75.5
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.5e-72 276.6 182 70.9
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 1.5e-72 276.6 166 74.1
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 1.9e-72 276.2 158 75.9
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 1.9e-72 276.2 165 77.6
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 2.5e-72 275.8 168 76.8
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 3.3e-72 275.4 169 75.1
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 3.3e-72 275.4 168 73.8
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 4.3e-72 275.0 158 79.1
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 4.3e-72 275.0 158 77.8
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 5.6e-72 274.6 159 79.2
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 5.6e-72 274.6 159 79.2
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 5.6e-72 274.6 164 75.6
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 7.3e-72 274.2 159 78.0
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.2e-71 273.5 167 74.3
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 1.6e-71 273.1 186 72.0
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 4.7e-71 271.6 159 78.0
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 4.7e-71 271.6 159 77.4
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 6.1e-71 271.2 159 78.0
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 8.0e-71 270.8 159 77.4
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 1.0e-70 270.4 158 75.3
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 1.0e-70 270.4 159 78.0
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.0e-70 270.4 159 78.0
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 1.0e-70 270.4 158 76.6
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.4e-70 270.0 159 74.2
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 2.3e-70 269.2 168 72.6
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 5.2e-70 268.1 158 75.3
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 5.2e-70 268.1 164 73.8
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 5.2e-70 268.1 163 74.8
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 5.2e-70 268.1 169 72.2
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 8.9e-70 267.3 158 77.2
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 8.9e-70 267.3 158 75.9
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 8.9e-70 267.3 158 75.9
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 1.2e-69 266.9 158 76.6
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 3.4e-69 265.4 164 74.4
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 4.4e-69 265.0 158 77.2
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 5.8e-69 264.6 158 74.7
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 7.5e-69 264.2 158 75.3
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 1.3e-68 263.5 155 76.8
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 1.3e-68 263.5 159 74.2
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 2.9e-68 262.3 198 64.6
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 4.9e-68 261.5 206 63.1
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 4.9e-68 261.5 206 63.1
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 4.9e-68 261.5 169 69.8
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 6.4e-68 261.2 158 73.4
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 8.3e-68 260.8 186 71.0
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 1.4e-67 260.0 161 73.3
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 2.4e-67 259.2 165 72.7
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 2.0e-66 256.1 178 67.4
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 6.0e-66 254.6 153 74.5
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 1.0e-65 253.8 168 69.0
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 1.1e-64 250.4 172 72.1
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 1.9e-64 249.6 160 71.2
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 2.1e-63 246.1 177 64.4
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 9.8e-61 237.3 159 68.6
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.3e-60 236.9 176 67.0
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 2.9e-60 235.7 159 67.3
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 1.2e-58 230.3 144 75.7
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 2.7e-58 229.2 160 65.6
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 1.1e-56 223.8 132 75.0
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 1.8e-54 216.5 164 61.6
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 2.2e-52 209.5 162 61.7
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 1.7e-44 183.3 103 74.8
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.9e-41 172.2 103 71.8
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 8.4e-28 127.9 99 62.6
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 9.6e-24 114.4 158 41.8
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.6e-21 106.3 107 51.4
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 6.7e-09 65.1 118 37.3
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 5.7e-08 62.0 52 55.8
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 7.4e-08 61.6 93 44.1
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 2.8e-07 59.7 69 44.9
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 4.8e-07 58.9 46 63.0
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.1e-06 57.8 26 92.3
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 1.4e-06 57.4 48 62.5


User provided reference genes

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