Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD03G1109500 Malus domestica HOM05D006507 ORTHO05D007296 0.0e+00 2003.8 1107 100.0
Prupe.6G092200 Prunus persica HOM05D006507 ORTHO05D007296 1.1e-233 814.3 1437 44.9
RcHm_v2.0_Chr5g0061361 Rosa chinensis HOM05D006507 ORTHO05D007296 1.6e-182 644.4 1199 40.9
FAN11G1966 Fragaria x ananassa HOM05D006507 ORTHO05D007296 1.8e-146 524.6 1198 38.9
FAN16G3496 Fragaria x ananassa HOM05D006507 ORTHO05D007296 2.8e-139 500.7 1198 37.5
FvH4_3g33790 Fragaria vesca HOM05D006507 ORTHO05D007296 4.1e-114 417.2 1147 36.2
FAN21G2403 Fragaria x ananassa HOM05D006507 ORTHO05D007296 1.0e-104 386.0 1098 34.8
Cfa011382 Carpinus fangiana HOM05D006507 ORTHO05D007296 2.7e-73 281.6 1107 29.5
Haze_23947 Corylus avellana HOM05D006507 ORTHO05D007296 6.0e-57 227.3 947 29.9
Manes.11G139900 Manihot esculenta HOM05D006507 ORTHO05D007296 1.7e-51 209.1 918 28.4
Atru.chr3.3722 Acer truncatum HOM05D006507 ORTHO05D007296 6.4e-51 207.2 1043 26.9
CiPaw.13G105600 Carya illinoinensis HOM05D006507 ORTHO05D007296 3.5e-49 201.4 1113 27.9
QL01p036413 Quercus lobata HOM05D006507 ORTHO05D007296 1.7e-48 199.1 472 36.2
Atru.chr3.3727 Acer truncatum HOM05D006507 ORTHO05D007296 3.0e-48 198.4 1156 25.9
Ciclev10027733m.g Citrus clementina HOM05D006507 ORTHO05D007296 3.3e-47 194.9 953 27.7
Duzib170G0831 Durio zibethinus HOM05D006507 ORTHO05D007296 9.2e-42 176.8 1072 25.2
COL.COLO4_25271 Corchorus olitorius HOM05D006507 ORTHO05D007296 1.6e-41 176.0 1088 26.5
Thecc.09G262500 Theobroma cacao HOM05D006507 ORTHO05D007296 3.0e-40 171.8 1109 27.1
GSVIVG01025113001 Vitis vinifera HOM05D038408 ORTHO05D007296 6.4e-35 154.1 994 26.6
Gorai.001G129300 Gossypium raimondii HOM05D006507 ORTHO05D007296 5.4e-34 151.0 1045 25.2
Gohir.A07G115600 Gossypium hirsutum HOM05D006507 ORTHO05D007296 1.2e-33 149.8 1031 24.7
Gohir.D07G120101 Gossypium hirsutum HOM05D006507 ORTHO05D007296 2.1e-33 149.1 1044 25.3
TWI79G0725 Tripterygium wilfordii HOM05D006507 ORTHO05D007296 7.8e-33 147.1 786 27.1
TAR633G2802 Trochodendron aralioides HOM05D006507 ORTHO05D007296 1.3e-30 139.8 432 33.8
Potri.005G131500 Populus trichocarpa HOM05D006507 ORTHO05D007296 4.8e-30 137.9 958 25.3
PGR102G3212 Punica granatum HOM05D006507 ORTHO05D007296 8.1e-30 137.1 262 41.2
Sabra05G0106900 Salix brachista HOM05D006507 ORTHO05D007296 1.8e-29 136.0 1078 23.7
vmacro03159 Vaccinium macrocarpon HOM05D006507 ORTHO05D007296 1.2e-28 133.3 111 61.3
Lj3g0018374 Lotus japonicus HOM05D006507 ORTHO05D007296 7.6e-28 130.6 399 31.1
Lalb_Chr19g0137501 Lupinus albus HOM05D006507 ORTHO05D007296 1.3e-27 129.8 1140 23.2
Dinv32808 Davidia involucrata HOM05D006507 ORTHO05D007296 6.4e-27 127.5 150 51.3
THA.LOC104810833 Tarenaya hassleriana HOM05D006507 ORTHO05D007296 7.1e-26 124.0 148 45.9
Glyma.12G072900 Glycine max HOM05D006507 ORTHO05D007296 9.3e-26 123.6 227 40.1
CANSAT54G2524 Cannabis sativa HOM05D006507 ORTHO05D007296 1.6e-25 122.9 258 38.8
Sc21g0000130 Simmondsia chinensis HOM05D006507 ORTHO05D007296 2.1e-25 122.5 90 63.3
Cpa.g.sc139.57 Carica papaya HOM05D006507 ORTHO05D007296 2.7e-25 122.1 82 72.0
Aqoxy2G01879 Aquilegia oxysepala HOM05D006507 ORTHO05D007296 7.9e-25 120.6 138 50.0
VMungo1127G1622 Vigna mungo HOM05D006507 ORTHO05D007296 1.0e-24 120.2 151 47.7
Glyma.11G150661 Glycine max HOM05D006507 ORTHO05D007296 1.3e-24 119.8 227 40.5
CSS0009997 Camellia sinensis var. sinensis HOM05D006507 ORTHO05D007296 3.0e-24 118.6 533 27.4
BolC9t58131H Brassica oleracea HOM05D006507 ORTHO05D007296 3.9e-24 118.2 78 69.2
DCAR_006032 Daucus carota HOM05D006507 ORTHO05D007296 3.9e-24 118.2 94 66.0
ECA238G2561 Erigeron canadensis HOM05D006507 ORTHO05D007296 5.1e-24 117.9 206 40.8
Cc01_g11720 Coffea canephora HOM05D006507 ORTHO05D007296 8.7e-24 117.1 110 58.2
AL8G36760 Arabidopsis lyrata HOM05D006507 ORTHO05D007296 1.5e-23 116.3 113 54.9
PGSC0003DMG400007499 Solanum tuberosum HOM05D006507 ORTHO05D007296 1.9e-23 115.9 237 39.2
Carub.0008s2088 Capsella rubella HOM05D006507 ORTHO05D007296 2.5e-23 115.5 125 51.2
AT5G60150 Arabidopsis thaliana HOM05D006507 ORTHO05D007296 5.6e-23 114.4 77 70.1
A10p17300 Brassica napus HOM05D006507 ORTHO05D007296 5.6e-23 114.4 123 52.0
C09p52640 Brassica napus HOM05D006507 ORTHO05D007296 5.6e-23 114.4 121 52.1
BraA10t43814Z Brassica rapa HOM05D006507 ORTHO05D007296 9.6e-23 113.6 123 52.0
Actinidia08403 Actinidia chinensis HOM05D006507 ORTHO05D007296 1.6e-22 112.8 68 80.9
Rhsim13G0091300 Rhododendron simsii HOM05D006507 ORTHO05D007296 2.8e-22 112.1 478 25.7
ClCG02G020740 Citrullus lanatus HOM05D006507 ORTHO05D007296 3.7e-22 111.7 161 46.6
Sp6g21800 Schrenkiella parvula HOM05D006507 ORTHO05D007296 4.8e-22 111.3 145 46.2
Ca_19235_v3 Cicer arietinum L. HOM05D006507 ORTHO05D007296 8.1e-22 110.5 107 54.2
HanXRQChr06g0183281 Helianthus annuus HOM05D006507 ORTHO05D007296 8.1e-22 110.5 107 57.0
arahy.Tifrunner.gnm1.ann1.M2HQ4Q Arachis hypogaea HOM05D006507 ORTHO05D007296 1.4e-21 109.8 230 37.4
MSTRG.12615 Avicennia marina HOM05D006507 ORTHO05D007296 1.4e-21 109.8 112 52.7
Thhalv10012478m.g Eutrema salsugineum HOM05D006507 ORTHO05D007296 1.8e-21 109.4 203 38.9
TPR.G2995 Trifolium pratense HOM05D006507 ORTHO05D007296 1.8e-21 109.4 146 43.8
PSO339G6510 Papaver somniferum HOM05D006507 ORTHO05D007296 2.4e-21 109.0 113 57.5
Sopen06g031820 Solanum pennellii HOM05D006507 ORTHO05D007296 5.3e-21 107.8 152 48.0
Migut.N02633 Erythranthe guttata HOM05D006507 ORTHO05D007296 9.0e-21 107.1 121 48.8
Lsat_1_v5_gn_2_25380 Lactuca sativa HOM05D006507 ORTHO05D007296 1.5e-20 106.3 146 47.3
Nitab4.5_0000270g0010 Nicotiana tabacum HOM05D006507 ORTHO05D007296 1.5e-20 106.3 191 42.9
Psat7g223080 Pisum sativum HOM05D006507 ORTHO05D007296 2.0e-20 105.9 253 36.8
PSO384G3963 Papaver somniferum HOM05D006507 ORTHO05D007296 4.5e-20 104.8 479 29.0
SalBow3G2105 Salvia bowleyana HOM05D006507 ORTHO05D007296 4.5e-20 104.8 179 43.6
CAN.G1001.2 Capsicum annuum HOM05D006507 ORTHO05D007296 7.6e-20 104.0 204 40.2
SGA_v2.0_scaffold80G25739 Striga asiatica HOM05D006507 ORTHO05D007296 7.6e-20 104.0 185 41.1
MELO3C025723.2 Cucumis melo HOM05D006507 ORTHO05D007296 9.9e-20 103.6 205 39.5
Medtr4g061110 Medicago truncatula HOM05D006507 ORTHO05D007296 1.3e-19 103.2 142 43.7
Solyc06g075420.1 Solanum lycopersicum HOM05D006507 ORTHO05D007296 1.3e-19 103.2 157 46.5
CARHR273800 Cardamine hirsuta HOM05D006507 ORTHO05D007296 1.7e-19 102.8 232 33.6
AUR62025040 Chenopodium quinoa HOM05D006507 ORTHO05D007296 7.9e-17 94.0 123 45.5
Os12g0102700 Oryza sativa ssp. japonica HOM05D006507 ORTHO05D007296 1.3e-16 93.2 64 65.6
Actinidia24071 Actinidia chinensis HOM05D006507 ORTHO05D007296 2.3e-16 92.4 383 28.7
arahy.Tifrunner.gnm1.ann1.NP2AMW Arachis hypogaea HOM05D006507 ORTHO05D007296 2.3e-16 92.4 924 23.1
SEGI_16529 Sequoiadendron giganteum HOM05D006507 ORTHO05D007296 5.1e-16 91.3 64 65.6
Sed0026220 Sechium edule HOM05D006507 ORTHO05D007296 3.3e-15 88.6 231 32.9
HPP92_026984 Vanilla planifolia HOM05D006507 ORTHO05D007296 5.6e-15 87.8 82 56.1
HPP92_015411 Vanilla planifolia HOM05D006507 ORTHO05D007296 9.6e-15 87.0 82 56.1
Actinidia07103 Actinidia chinensis HOM05D006507 ORTHO05D007296 1.6e-14 86.3 410 27.3
AUR62006495 Chenopodium quinoa HOM05D006507 ORTHO05D007296 1.6e-14 86.3 232 30.2
CsaV3_6G021880 Cucumis sativus L. HOM05D006507 ORTHO05D007296 1.4e-13 83.2 170 35.9
Hma1.2p1_0840F.1_g226520 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 3.1e-13 82.0 54 68.5
AagrBONN_evm.TU.Sc2ySwM_368.2680 Anthoceros agrestis HOM05D006507 ORTHO05D007296 5.3e-13 81.3 142 37.3
Oeu022272.1 Olea europaea HOM05D006507 ORTHO05D007296 1.2e-12 80.1 49 73.5
EL10Ac9g22402 Beta vulgaris HOM05D006507 ORTHO05D007296 3.4e-12 78.6 109 42.2
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 3.8e-11 75.1 71 59.2
Pp3c16_7200 Physcomitrium patens HOM05D034648 ORTHO05D007296 1.1e-10 73.6 200 33.5
Mapoly0001s0188 Marchantia polymorpha HOM05D006507 ORTHO05D007296 4.2e-10 71.6 61 63.9
ATR1159G075 Amborella trichopoda HOM05D006507 ORTHO05D007296 9.3e-10 70.5 134 36.6
Sopen02g037960 Solanum pennellii HOM05D006507 ORTHO05D007296 7.9e-09 67.4 114 45.6
Hma1.2p1_0660F.1_g197490 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 3.3e-07 62.0 69 49.3
Nitab4.5_0001698g0050 Nicotiana tabacum HOM05D006507 ORTHO05D007296 9.7e-07 60.5 202 35.1


User provided reference genes

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