Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD03G1106100 Malus domestica HOM05D031184 ORTHO05D010307 3.7e-43 178.7 116 100.0
RcHm_v2.0_Chr5g0074231 Rosa chinensis HOM05D009519 ORTHO05D010307 3.1e-13 79.3 68 58.8
RcHm_v2.0_Chr5g0074191 Rosa chinensis HOM05D009519 ORTHO05D010307 2.0e-12 76.6 66 57.6
FAN05G3453 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.2e-11 73.2 73 53.4
RcHm_v2.0_Chr7g0226411 Rosa chinensis HOM05D009519 ORTHO05D010307 3.5e-09 65.9 76 50.0
FAN25G2503 Fragaria x ananassa HOM05D009519 ORTHO05D010307 6.6e-08 61.6 60 50.0
Dinv21881 Davidia involucrata HOM05D000104 ORTHO05D009920 1.5e-07 60.5 70 40.0
QL07p033370 Quercus lobata HOM05D020603 ORTHO05D019575 2.5e-07 59.7 72 30.6
RcHm_v2.0_Chr5g0069591 Rosa chinensis HOM05D009519 ORTHO05D010307 2.5e-07 59.7 57 52.6
arahy.Tifrunner.gnm1.ann1.3K1SXW Arachis hypogaea HOM05D000162 ORTHO05D000090 3.3e-07 59.3 65 47.7
PSO732G0362 Papaver somniferum HOM05D010315 ORTHO05D016663 3.3e-07 59.3 73 39.7
PSO210G3738 Papaver somniferum HOM05D010315 ORTHO05D011376 4.3e-07 58.9 105 33.3
SHI04033 Sapria himalayana HOM05D007157 ORTHO05D009045 4.3e-07 58.9 69 36.2
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 5.6e-07 58.5 39 69.2
PSO210G7725 Papaver somniferum HOM05D010315 ORTHO05D011376 5.6e-07 58.5 103 34.0
Potri.019G062332 Populus trichocarpa HOM05D024593 ORTHO05D010307 5.6e-07 58.5 63 44.4
HPP92_020726 Vanilla planifolia HOM05D000891 ORTHO05D000761 5.6e-07 58.5 74 41.9
arahy.Tifrunner.gnm1.ann1.V8H6G7 Arachis hypogaea HOM05D029812 ORTHO05D016663 7.3e-07 58.2 46 56.5
Thecc.04G296100 Theobroma cacao HOM05D002444 ORTHO05D009235 9.5e-07 57.8 71 39.4
Thhalv10029183m.g Eutrema salsugineum HOM05D015660 ORTHO05D003288 1.2e-06 57.4 81 33.3
TAR626G1174 Trochodendron aralioides HOM05D031184 ORTHO05D037806 1.2e-06 57.4 61 44.3
TAR636G3551 Trochodendron aralioides HOM05D031184 ORTHO05D037806 1.2e-06 57.4 61 44.3
MD03G1113700 Malus domestica HOM05D010115 ORTHO05D010307 1.6e-06 57.0 47 57.4
FAN11G1758 Fragaria x ananassa HOM05D004321 ORTHO05D004889 2.1e-06 56.6 52 55.8
ATR0753G016 Amborella trichopoda HOM05D007545 ORTHO05D009579 2.8e-06 56.2 58 48.3
Migut.K01489 Erythranthe guttata HOM05D005622 ORTHO05D002854 2.8e-06 56.2 72 34.7
Gorai.013G000300 Gossypium raimondii HOM05D007063 ORTHO05D008822 2.8e-06 56.2 66 42.4
TWI34G1525 Tripterygium wilfordii HOM05D006842 ORTHO05D008908 2.8e-06 56.2 77 41.6
CSS0035408 Camellia sinensis var. sinensis HOM05D007251 ORTHO05D009266 3.6e-06 55.8 80 41.2
DCAR_015277 Daucus carota HOM05D005287 ORTHO05D006893 3.6e-06 55.8 60 36.7
HanXRQChr03g0068361 Helianthus annuus HOM05D006842 ORTHO05D008908 3.6e-06 55.8 58 48.3
HanXRQChr04g0104281 Helianthus annuus HOM05D016049 ORTHO05D019812 3.6e-06 55.8 72 36.1
Nitab4.5_0001726g0080 Nicotiana tabacum HOM05D007063 ORTHO05D008822 3.6e-06 55.8 84 35.7
RcHm_v2.0_Chr5g0062151 Rosa chinensis HOM05D041888 ORTHO05D016273 3.6e-06 55.8 65 43.1
Thecc.02G273600 Theobroma cacao HOM05D000424 ORTHO05D008586 3.6e-06 55.8 75 33.3
FAN25G3245 Fragaria x ananassa HOM05D009519 ORTHO05D010307 4.7e-06 55.5 63 47.6
Gohir.A08G137650 Gossypium hirsutum HOM05D000104 ORTHO05D008354 4.7e-06 55.5 69 37.7
Nitab4.5_0003631g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000003 4.7e-06 55.5 70 41.4
Sabra07G0066600 Salix brachista HOM05D003039 ORTHO05D009478 4.7e-06 55.5 75 38.7
AL1G11782 Arabidopsis lyrata HOM05D003039 ORTHO05D009478 6.2e-06 55.1 75 37.3
AT1G02420 Arabidopsis thaliana HOM05D003039 ORTHO05D009478 6.2e-06 55.1 75 37.3
Aa31LG8G350 Aethionema arabicum HOM05D000891 ORTHO05D000761 8.1e-06 54.7 76 31.6
CDE02G2051 Ceratophyllum demersum HOM05D000424 ORTHO05D009589 8.1e-06 54.7 54 37.0
Thhalv10001906m.g Eutrema salsugineum HOM05D004824 ORTHO05D003903 8.1e-06 54.7 55 41.8
THA.LOC104808230 Tarenaya hassleriana HOM05D000891 ORTHO05D000761 8.1e-06 54.7 56 41.1


User provided reference genes

Program Settings