Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD03G1093600 Malus domestica HOM05D000952 ORTHO05D000757 2.6e-52 208.4 102 100.0
MD05G1299800 Malus domestica HOM05D000952 ORTHO05D000757 9.8e-15 83.6 44 88.6
Prupe.5G146700 Prunus persica HOM05D000952 ORTHO05D000757 1.6e-12 76.3 53 66.0
MD06G1136800 Malus domestica HOM05D000952 ORTHO05D000757 2.0e-12 75.9 46 78.3
MD14G1151600 Malus domestica HOM05D000952 ORTHO05D000757 3.0e-11 72.0 46 76.1
MD03G1233500 Malus domestica HOM05D000952 ORTHO05D000757 5.0e-11 71.2 58 65.5
Lalb_Chr13g0297151 Lupinus albus HOM05D000952 ORTHO05D000757 5.2e-08 61.2 43 62.8
Duzib205G0141 Durio zibethinus HOM05D000952 ORTHO05D000757 8.9e-08 60.5 51 51.0
FvH4_5g08960 Fragaria vesca HOM05D000952 ORTHO05D000757 8.9e-08 60.5 47 59.6
FAN08G0095 Fragaria x ananassa HOM05D000952 ORTHO05D000757 8.9e-08 60.5 47 59.6
FAN18G3685 Fragaria x ananassa HOM05D000952 ORTHO05D000757 8.9e-08 60.5 47 59.6
RcHm_v2.0_Chr7g0189411 Rosa chinensis HOM05D000952 ORTHO05D000757 8.9e-08 60.5 47 59.6
Haze_07187 Corylus avellana HOM05D000952 ORTHO05D000757 1.2e-07 60.1 47 57.4
AT4G24990 Arabidopsis thaliana HOM05D000952 ORTHO05D000757 1.5e-07 59.7 46 58.7
FAN13G2457 Fragaria x ananassa HOM05D000952 ORTHO05D000757 1.5e-07 59.7 47 59.6
TPR.G12857 Trifolium pratense HOM05D000952 ORTHO05D000757 1.5e-07 59.7 46 58.7
CiPaw.12G003400 Carya illinoinensis HOM05D000952 ORTHO05D000757 2.0e-07 59.3 46 54.3
ClCG06G018120 Citrullus lanatus HOM05D000952 ORTHO05D000757 2.0e-07 59.3 47 57.4
Thhalv10026428m.g Eutrema salsugineum HOM05D000952 ORTHO05D000757 2.0e-07 59.3 46 58.7
Lalb_Chr07g0183591 Lupinus albus HOM05D000952 ORTHO05D000757 2.0e-07 59.3 46 54.3
Sp7g22980 Schrenkiella parvula HOM05D000952 ORTHO05D000757 2.0e-07 59.3 49 55.1
FAN04G0909 Fragaria x ananassa HOM05D000952 ORTHO05D000757 2.6e-07 58.9 50 54.0
Lalb_Chr12g0202351 Lupinus albus HOM05D000952 ORTHO05D000757 2.6e-07 58.9 43 62.8
Manes.14G048000 Manihot esculenta HOM05D000952 ORTHO05D000757 2.6e-07 58.9 51 52.9
Hund02470 Selenicereus undatus HOM05D000952 ORTHO05D000757 2.6e-07 58.9 47 53.2
THA.LOC104803151 Tarenaya hassleriana HOM05D000952 ORTHO05D000757 2.6e-07 58.9 46 56.5
THA.LOC104811570 Tarenaya hassleriana HOM05D000952 ORTHO05D000757 2.6e-07 58.9 46 56.5
CiPaw.11G003600 Carya illinoinensis HOM05D000952 ORTHO05D000757 3.4e-07 58.5 51 49.0
Lalb_Chr12g0202341 Lupinus albus HOM05D000952 ORTHO05D000757 3.4e-07 58.5 46 54.3
Sc04g0000420 Simmondsia chinensis HOM05D000952 ORTHO05D000757 3.4e-07 58.5 57 49.1
Gohir.A12G192000 Gossypium hirsutum HOM05D000952 ORTHO05D000757 4.4e-07 58.2 46 56.5
Gohir.D12G194200 Gossypium hirsutum HOM05D000952 ORTHO05D000757 4.4e-07 58.2 46 56.5
Gorai.008G208900 Gossypium raimondii HOM05D000952 ORTHO05D000757 4.4e-07 58.2 46 56.5
Thecc.03G135200 Theobroma cacao HOM05D000952 ORTHO05D000757 4.4e-07 58.2 46 54.3
TAR622G0495 Trochodendron aralioides HOM05D000952 ORTHO05D000757 4.4e-07 58.2 46 56.5
Aa31LG7G10750 Aethionema arabicum HOM05D000952 ORTHO05D000757 5.8e-07 57.8 46 56.5
AL7G28180 Arabidopsis lyrata HOM05D000952 ORTHO05D000757 5.8e-07 57.8 46 56.5
Carub.0007s1604 Capsella rubella HOM05D000952 ORTHO05D000757 5.8e-07 57.8 46 56.5
CARHR232380 Cardamine hirsuta HOM05D000952 ORTHO05D000757 5.8e-07 57.8 46 56.5
Cfa018747 Carpinus fangiana HOM05D000952 ORTHO05D000757 5.8e-07 57.8 46 56.5
Medtr8g096380 Medicago truncatula HOM05D000952 ORTHO05D000757 7.5e-07 57.4 44 59.1
Psat7g037360 Pisum sativum HOM05D000952 ORTHO05D000757 7.5e-07 57.4 44 59.1
Potri.015G101200 Populus trichocarpa HOM05D000952 ORTHO05D000757 7.5e-07 57.4 46 52.2
Sabra12G0075500 Salix brachista HOM05D000952 ORTHO05D000757 7.5e-07 57.4 46 52.2
Hund02469 Selenicereus undatus HOM05D000952 ORTHO05D000757 7.5e-07 57.4 57 47.4
TWI23G0678 Tripterygium wilfordii HOM05D000952 ORTHO05D000757 7.5e-07 57.4 46 56.5
MELO3C026186.2 Cucumis melo HOM05D000952 ORTHO05D000757 9.8e-07 57.0 46 56.5
CsaV3_1G000330 Cucumis sativus L. HOM05D000952 ORTHO05D000757 9.8e-07 57.0 46 56.5
Sed0000337 Sechium edule HOM05D000952 ORTHO05D000757 9.8e-07 57.0 46 56.5
Sc22g0003630 Simmondsia chinensis HOM05D000952 ORTHO05D000757 9.8e-07 57.0 46 54.3
BcaC06g32844 Brassica carinata HOM05D000952 ORTHO05D000757 1.3e-06 56.6 55 49.1
QL10p001851 Quercus lobata HOM05D000952 ORTHO05D000757 1.3e-06 56.6 46 54.3
TWI39G0753 Tripterygium wilfordii HOM05D000952 ORTHO05D000757 1.3e-06 56.6 46 56.5
TAR629G3460 Trochodendron aralioides HOM05D000952 ORTHO05D000757 1.3e-06 56.6 52 46.2
Ciclev10033094m.g Citrus clementina HOM05D000952 ORTHO05D000757 1.7e-06 56.2 46 52.2
Duzib084G0844 Durio zibethinus HOM05D000952 ORTHO05D000757 1.7e-06 56.2 46 54.3
Thecc.03G135400 Theobroma cacao HOM05D000952 ORTHO05D000757 1.7e-06 56.2 46 52.2
TWI14G0590 Tripterygium wilfordii HOM05D000952 ORTHO05D000757 1.7e-06 56.2 46 56.5
arahy.Tifrunner.gnm1.ann1.DX1GN9 Arachis hypogaea HOM05D000952 ORTHO05D000757 2.2e-06 55.8 43 55.8
arahy.Tifrunner.gnm1.ann1.XJIX3Z Arachis hypogaea HOM05D000952 ORTHO05D000757 2.2e-06 55.8 43 55.8
EL10Ac5g11354 Beta vulgaris HOM05D000952 ORTHO05D000757 2.2e-06 55.8 57 45.6
PSO017G1125 Papaver somniferum HOM05D000952 ORTHO05D000757 2.2e-06 55.8 46 54.3
PSO478G4169 Papaver somniferum HOM05D000952 ORTHO05D000757 2.2e-06 55.8 46 54.3
Potri.012G103100 Populus trichocarpa HOM05D000952 ORTHO05D000757 2.2e-06 55.8 46 52.2
GSVIVG01008590001 Vitis vinifera HOM05D000952 ORTHO05D000757 2.2e-06 55.8 46 50.0
BcaC07g38172 Brassica carinata HOM05D000952 ORTHO05D000757 2.9e-06 55.5 46 52.2
A08p21320 Brassica napus HOM05D000952 ORTHO05D000757 2.9e-06 55.5 46 52.2
BraA08t34082Z Brassica rapa HOM05D000952 ORTHO05D000757 2.9e-06 55.5 46 52.2
Cpa.g.sc4.150 Carica papaya HOM05D000952 ORTHO05D000757 2.9e-06 55.5 48 56.2
AUR62029556 Chenopodium quinoa HOM05D000952 ORTHO05D000757 2.9e-06 55.5 47 48.9
AUR62034820 Chenopodium quinoa HOM05D000952 ORTHO05D000757 2.9e-06 55.5 47 48.9
PSO478G3460 Papaver somniferum HOM05D000952 ORTHO05D000757 2.9e-06 55.5 46 56.5
BcaB03g12453 Brassica carinata HOM05D000952 ORTHO05D000757 4.9e-06 54.7 46 52.2
Duzib264G0770 Durio zibethinus HOM05D000952 ORTHO05D000757 4.9e-06 54.7 48 52.1
Glyma.05G202800 Glycine max HOM05D000952 ORTHO05D000757 4.9e-06 54.7 43 55.8
Gohir.A03G054000 Gossypium hirsutum HOM05D000952 ORTHO05D000757 4.9e-06 54.7 46 54.3
Gohir.D03G113000 Gossypium hirsutum HOM05D000952 ORTHO05D000757 4.9e-06 54.7 46 54.3
Gorai.003G119200 Gossypium raimondii HOM05D000952 ORTHO05D000757 4.9e-06 54.7 46 54.3
Atru.chr6.1873 Acer truncatum HOM05D000952 ORTHO05D000757 6.4e-06 54.3 46 52.2
FAN05G5007 Fragaria x ananassa HOM05D000952 ORTHO05D000757 6.4e-06 54.3 48 52.1
PSO017G5220 Papaver somniferum HOM05D000952 ORTHO05D000757 6.4e-06 54.3 46 54.3
TAR374G0781 Trochodendron aralioides HOM05D000952 ORTHO05D000757 6.4e-06 54.3 46 52.2
Actinidia19571 Actinidia chinensis HOM05D000952 ORTHO05D000757 8.3e-06 53.9 48 47.9
Dinv33314 Davidia involucrata HOM05D000952 ORTHO05D000757 8.3e-06 53.9 46 52.2
SalBow1G4453 Salvia bowleyana HOM05D000952 ORTHO05D000757 8.3e-06 53.9 50 48.0
TWI34G0029 Tripterygium wilfordii HOM05D000952 ORTHO05D000757 8.3e-06 53.9 43 55.8


User provided reference genes

Program Settings