Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD03G1051700 Malus domestica HOM05D008084 ORTHO05D010227 1.1e-201 706.4 372 100.0
MD11G1053800 Malus domestica HOM05D008084 ORTHO05D010227 3.3e-153 545.4 383 79.6
Prupe.6G041100 Prunus persica HOM05D008084 ORTHO05D010227 3.4e-113 412.5 371 66.3
FAN11G0725 Fragaria x ananassa HOM05D008084 ORTHO05D010227 1.4e-90 337.4 377 57.8
FvH4_3g40511 Fragaria vesca HOM05D008084 ORTHO05D010227 1.5e-89 334.0 367 58.3
FAN25G2941 Fragaria x ananassa HOM05D008084 ORTHO05D010227 6.0e-86 322.0 364 58.0
FAN16G3304 Fragaria x ananassa HOM05D008084 ORTHO05D010227 1.3e-85 320.9 371 57.7
Thecc.09G363800 Theobroma cacao HOM05D008084 ORTHO05D010227 3.9e-77 292.7 362 51.7
Potri.013G157100 Populus trichocarpa HOM05D008084 ORTHO05D010227 6.2e-75 285.4 366 50.3
Oeu015570.1 Olea europaea HOM05D008084 ORTHO05D010227 1.3e-72 277.7 368 49.2
TAR636G1366 Trochodendron aralioides HOM05D008084 ORTHO05D010227 8.4e-72 275.0 364 50.0
CANSAT54G2569 Cannabis sativa HOM05D008084 ORTHO05D010227 1.1e-71 274.6 378 46.8
TWI75G0204 Tripterygium wilfordii HOM05D008084 ORTHO05D010227 1.4e-71 274.2 365 48.5
TWI31G0108 Tripterygium wilfordii HOM05D008084 ORTHO05D010227 1.9e-71 273.9 363 49.3
Potri.019G130200 Populus trichocarpa HOM05D008084 ORTHO05D010227 2.1e-70 270.4 363 47.9
Dinv12280 Davidia involucrata HOM05D008084 ORTHO05D010227 2.7e-70 270.0 362 52.8
HanXRQChr16g0522641 Helianthus annuus HOM05D008084 ORTHO05D010227 3.0e-69 266.5 398 46.7
Manes.02G211900 Manihot esculenta HOM05D008084 ORTHO05D010227 8.7e-69 265.0 366 45.9
ECA247G2653 Erigeron canadensis HOM05D008084 ORTHO05D010227 1.9e-68 263.8 384 45.3
TWI79G0851 Tripterygium wilfordii HOM05D008084 ORTHO05D010227 1.9e-68 263.8 357 46.8
Aqoxy4G02419 Aquilegia oxysepala HOM05D008084 ORTHO05D010227 4.3e-68 262.7 365 47.7
Cc01_g15320 Coffea canephora HOM05D008084 ORTHO05D010227 1.4e-66 257.7 378 46.6
RcHm_v2.0_Chr5g0073191 Rosa chinensis HOM05D008084 ORTHO05D010227 2.6e-65 253.4 279 55.9
Gorai.003G152600 Gossypium raimondii HOM05D008084 ORTHO05D010227 5.8e-65 252.3 362 47.2
Gohir.D03G145500 Gossypium hirsutum HOM05D008084 ORTHO05D010227 1.9e-63 247.3 362 46.7
Gohir.A03G023200 Gossypium hirsutum HOM05D008084 ORTHO05D010227 5.4e-63 245.7 362 46.4
CiPaw.13G063700 Carya illinoinensis HOM05D008084 ORTHO05D010227 3.0e-61 240.0 370 45.1
Sed0017021 Sechium edule HOM05D008084 ORTHO05D010227 5.6e-60 235.7 371 43.1
SalBow2G0186 Salvia bowleyana HOM05D008084 ORTHO05D010227 1.4e-58 231.1 368 42.1
arahy.Tifrunner.gnm1.ann1.QQ3HDC Arachis hypogaea HOM05D008084 ORTHO05D010227 5.3e-58 229.2 349 45.8
Medtr5g075400 Medicago truncatula HOM05D008084 ORTHO05D010227 9.0e-58 228.4 361 45.4
PGR102G0866 Punica granatum HOM05D008084 ORTHO05D010227 2.0e-57 227.3 438 40.4
TAR623G0794 Trochodendron aralioides HOM05D008084 ORTHO05D010227 2.6e-57 226.9 368 45.1
VMungo0647G2268 Vigna mungo HOM05D008084 ORTHO05D010227 7.6e-57 225.3 370 43.8
CsaV3_1G004770 Cucumis sativus L. HOM05D008084 ORTHO05D010227 2.9e-56 223.4 370 40.0
Glyma.14G204200 Glycine max HOM05D008084 ORTHO05D010227 2.9e-56 223.4 356 45.5
MELO3C020485.2 Cucumis melo HOM05D008084 ORTHO05D010227 8.4e-56 221.9 370 39.7
Lsat_1_v5_gn_9_13820 Lactuca sativa HOM05D008084 ORTHO05D010227 1.1e-55 221.5 448 40.0
PSO384G0724 Papaver somniferum HOM05D008084 ORTHO05D010227 1.9e-55 220.7 373 41.6
PSO339G0360 Papaver somniferum HOM05D008084 ORTHO05D010227 4.2e-55 219.5 373 40.2
TPR.G18293 Trifolium pratense HOM05D008084 ORTHO05D010227 5.5e-55 219.2 361 49.3
Psat2g050960 Pisum sativum HOM05D008084 ORTHO05D010227 1.6e-54 217.6 348 42.8
Ca_05708_v3 Cicer arietinum L. HOM05D008084 ORTHO05D010227 1.3e-53 214.5 364 40.1
Eucgr.B04026 Eucalyptus grandis HOM05D008084 ORTHO05D010227 3.0e-53 213.4 185 63.2
Migut.D00819 Erythranthe guttata HOM05D008084 ORTHO05D010227 6.7e-53 212.2 379 43.3
VMungo0540G0456 Vigna mungo HOM05D008084 ORTHO05D010227 8.7e-53 211.8 347 42.9
GSVIVG01024560001 Vitis vinifera HOM05D008084 ORTHO05D010227 1.9e-52 210.7 188 60.1
Glyma.02G236300 Glycine max HOM05D008084 ORTHO05D010227 5.6e-52 209.1 353 43.6
Phvul.006G078700 Phaseolus vulgaris HOM05D008084 ORTHO05D010227 5.6e-52 209.1 325 43.1
arahy.Tifrunner.gnm1.ann1.VW3DCY Arachis hypogaea HOM05D008084 ORTHO05D010227 7.4e-52 208.8 349 42.4
Phvul.008G247700 Phaseolus vulgaris HOM05D008084 ORTHO05D010227 1.3e-51 208.0 348 43.7
Lj6g0015607 Lotus japonicus HOM05D008084 ORTHO05D010227 1.8e-50 204.1 347 42.7
LjContig00141g0012818 Lotus japonicus HOM05D008084 ORTHO05D010227 1.2e-49 201.4 349 40.1
Glyma.18G052300 Glycine max HOM05D008084 ORTHO05D010227 1.0e-48 198.4 352 41.5
Ca_15056_v3 Cicer arietinum L. HOM05D008084 ORTHO05D010227 6.0e-46 189.1 362 38.1
Cpa.g.sc2.297 Carica papaya HOM05D008084 ORTHO05D010227 1.3e-43 181.4 290 44.5
MBI03_g15595_MAGBIO Magnolia biondii HOM05D008084 ORTHO05D010227 9.0e-42 175.3 355 36.9
Psat5g148440 Pisum sativum HOM05D008084 ORTHO05D010227 9.0e-42 175.3 297 39.7
Medtr3g467150 Medicago truncatula HOM05D008084 ORTHO05D010227 1.0e-40 171.8 316 38.6
Cfa011830 Carpinus fangiana HOM05D008084 ORTHO05D010227 3.2e-39 166.8 303 41.9
HPP92_028207 Vanilla planifolia HOM05D008084 ORTHO05D010227 1.6e-38 164.5 134 59.0
TPR.G28793 Trifolium pratense HOM05D008084 ORTHO05D010227 1.7e-35 154.5 334 36.8
HPP92_025125 Vanilla planifolia HOM05D008084 ORTHO05D010227 7.2e-31 139.0 145 47.6
Zm00001eb419060 Zea mays HOM05D008084 ORTHO05D010227 1.2e-30 138.3 410 37.1
SEGI_31879 Sequoiadendron giganteum HOM05D008084 ORTHO05D010227 8.2e-27 125.6 321 32.1
Rhsim13G0059500 Rhododendron simsii HOM05D008084 ORTHO05D010227 9.1e-26 122.1 279 36.9
Actinidia11623 Actinidia chinensis HOM05D008084 ORTHO05D010227 5.0e-24 116.3 246 38.2
Actinidia23166 Actinidia chinensis HOM05D008084 ORTHO05D010227 6.1e-14 82.8 208 34.6
Mapoly0102s0044 Marchantia polymorpha HOM05D008084 ORTHO05D010227 1.2e-09 68.6 81 40.7
ATR1127G215 Amborella trichopoda HOM05D008084 ORTHO05D010227 4.5e-09 66.6 235 28.5
AagrBONN_evm.TU.Sc2ySwM_368.1036 Anthoceros agrestis HOM05D000833 ORTHO05D000969 7.2e-07 59.3 89 37.1
Cc04_g09310 Coffea canephora HOM05D000833 ORTHO05D000969 2.1e-06 57.8 58 46.6
unitig_21.g20763 Utricularia gibba HOM05D000833 ORTHO05D000969 2.7e-06 57.4 111 32.4
HanXRQChr08g0227081 Helianthus annuus HOM05D000833 ORTHO05D000969 6.1e-06 56.2 148 29.1


User provided reference genes

Program Settings