Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD03G1033300 Malus domestica HOM05D000840 ORTHO05D000670 1.8e-23 111.7 55 100.0
MD03G1032800 Malus domestica HOM05D000840 ORTHO05D000670 2.2e-13 78.2 37 97.3
MD03G1033600 Malus domestica HOM05D000840 ORTHO05D000670 2.2e-13 78.2 37 97.3
MD03G1032700 Malus domestica HOM05D000840 ORTHO05D000670 1.9e-12 75.1 37 91.9
MD03G1033800 Malus domestica HOM05D000840 ORTHO05D000670 9.3e-12 72.8 37 89.2
Prupe.6G027500 Prunus persica HOM05D000840 ORTHO05D000670 3.9e-10 67.4 37 81.1
Prupe.6G111000 Prunus persica HOM05D000840 ORTHO05D000670 3.9e-10 67.4 37 81.1
MD03G1033000 Malus domestica HOM05D000840 ORTHO05D000670 1.9e-09 65.1 32 90.6
RcHm_v2.0_Chr5g0075871 Rosa chinensis HOM05D000840 ORTHO05D000670 2.5e-09 64.7 37 78.4
FvH4_3g42370 Fragaria vesca HOM05D000840 ORTHO05D000670 3.3e-09 64.3 37 78.4
FAN25G1451 Fragaria x ananassa HOM05D000840 ORTHO05D000670 3.3e-09 64.3 37 78.4
FAN11G2882 Fragaria x ananassa HOM05D000840 ORTHO05D000670 7.4e-09 63.2 37 75.7
FAN21G2894 Fragaria x ananassa HOM05D000840 ORTHO05D000670 1.3e-08 62.4 37 75.7
ClCG09G013490 Citrullus lanatus HOM05D000840 ORTHO05D000670 1.6e-08 62.0 37 70.3
ClCG09G013500 Citrullus lanatus HOM05D000840 ORTHO05D000670 1.6e-08 62.0 37 70.3
MD11G1036600 Malus domestica HOM05D000840 ORTHO05D000670 1.6e-08 62.0 37 81.1
Prupe.6G027700 Prunus persica HOM05D000840 ORTHO05D000670 1.6e-08 62.0 37 73.0
FAN16G1995 Fragaria x ananassa HOM05D000840 ORTHO05D000670 3.7e-08 60.8 37 75.7
Sed0011014 Sechium edule HOM05D000840 ORTHO05D000670 8.2e-08 59.7 37 67.6
Lj7C492T6 Lonicera japonica HOM05D000840 ORTHO05D000670 1.1e-07 59.3 37 67.6
MELO3C018679.2 Cucumis melo HOM05D000840 ORTHO05D000670 1.8e-07 58.5 37 67.6
Dinv31990 Davidia involucrata HOM05D000840 ORTHO05D000670 1.8e-07 58.5 37 70.3
Dinv31992 Davidia involucrata HOM05D000840 ORTHO05D000670 2.4e-07 58.2 37 67.6
CANSAT56G1456 Cannabis sativa HOM05D000840 ORTHO05D000670 6.9e-07 56.6 37 67.6
Dinv31533 Davidia involucrata HOM05D000840 ORTHO05D000670 6.9e-07 56.6 37 62.2
HanXRQChr03g0080491 Helianthus annuus HOM05D000840 ORTHO05D000670 6.9e-07 56.6 42 59.5
Ciclev10024717m.g Citrus clementina HOM05D000840 ORTHO05D000670 1.2e-06 55.8 38 65.8
Thecc.06G034400 Theobroma cacao HOM05D000840 ORTHO05D000670 1.2e-06 55.8 38 68.4
Duzib235G0353 Durio zibethinus HOM05D000840 ORTHO05D000670 1.5e-06 55.5 38 65.8
Actinidia01692 Actinidia chinensis HOM05D000840 ORTHO05D000670 2.0e-06 55.1 39 64.1
arahy.Tifrunner.gnm1.ann1.8F3D8E Arachis hypogaea HOM05D000840 ORTHO05D000670 2.0e-06 55.1 37 64.9
arahy.Tifrunner.gnm1.ann1.E5CV98 Arachis hypogaea HOM05D000840 ORTHO05D000670 2.0e-06 55.1 37 64.9
Cpa.g.sc10.131 Carica papaya HOM05D000840 ORTHO05D000670 2.6e-06 54.7 38 63.2
Duzib235G1450 Durio zibethinus HOM05D000840 ORTHO05D000670 2.6e-06 54.7 38 65.8
ECA240G2103 Erigeron canadensis HOM05D000840 ORTHO05D000670 2.6e-06 54.7 42 64.3
Manes.11G061900 Manihot esculenta HOM05D000840 ORTHO05D000670 2.6e-06 54.7 38 65.8
Thecc.06G034100 Theobroma cacao HOM05D000840 ORTHO05D000670 2.6e-06 54.7 38 65.8
TAR633G2034 Trochodendron aralioides HOM05D000840 ORTHO05D000670 2.6e-06 54.7 37 67.6
arahy.Tifrunner.gnm1.ann1.PEC4AR Arachis hypogaea HOM05D000840 ORTHO05D000670 3.4e-06 54.3 37 64.9
DCAR_003830 Daucus carota HOM05D000840 ORTHO05D000670 3.4e-06 54.3 39 71.8
Sabra03G0015900 Salix brachista HOM05D000840 ORTHO05D000670 3.4e-06 54.3 38 65.8
Sabra03G0016000 Salix brachista HOM05D000840 ORTHO05D000670 3.4e-06 54.3 38 65.8
Sabra03G0016100 Salix brachista HOM05D000840 ORTHO05D000670 3.4e-06 54.3 38 65.8
vmacro12684 Vaccinium macrocarpon HOM05D000840 ORTHO05D000670 3.4e-06 54.3 45 60.0
ClCG09G013450 Citrullus lanatus HOM05D000840 ORTHO05D000670 4.5e-06 53.9 37 62.2
Duzib235G0104 Durio zibethinus HOM05D000840 ORTHO05D000670 4.5e-06 53.9 38 63.2
Medtr2g104400 Medicago truncatula HOM05D000840 ORTHO05D000670 4.5e-06 53.9 37 62.2
Sp1g14070 Schrenkiella parvula HOM05D000840 ORTHO05D000670 5.9e-06 53.5 38 65.8
CsaV3_7G006140 Cucumis sativus L. HOM05D000840 ORTHO05D000670 7.7e-06 53.1 37 62.2
CsaV3_7G006150 Cucumis sativus L. HOM05D000840 ORTHO05D000670 7.7e-06 53.1 37 62.2
Gohir.D05G122700 Gossypium hirsutum HOM05D000840 ORTHO05D000670 7.7e-06 53.1 38 63.2
Gorai.009G126200 Gossypium raimondii HOM05D000840 ORTHO05D000670 7.7e-06 53.1 38 63.2
RcHm_v2.0_Chr5g0075821 Rosa chinensis HOM05D000840 ORTHO05D000670 7.7e-06 53.1 30 83.3
Sc14g0004830 Simmondsia chinensis HOM05D000840 ORTHO05D000670 7.7e-06 53.1 40 70.0
arahy.Tifrunner.gnm1.ann1.40JDZM Arachis hypogaea HOM05D000840 ORTHO05D000670 1.0e-05 52.8 37 62.2
Thhalv10006572m.g Eutrema salsugineum HOM05D000840 ORTHO05D000670 1.0e-05 52.8 38 65.8
HanXRQChr13g0410001 Helianthus annuus HOM05D000840 ORTHO05D000670 1.0e-05 52.8 42 57.1
Potri.003G012400 Populus trichocarpa HOM05D000840 ORTHO05D000670 1.0e-05 52.8 38 63.2


User provided reference genes

Program Settings