Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 7.1e-131 470.7 254 100.0
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 3.3e-112 408.7 256 87.1
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 1.1e-99 367.1 256 79.7
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.6e-90 336.7 255 73.7
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 2.7e-90 335.9 255 73.7
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 3.0e-89 332.4 255 72.9
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 8.8e-89 330.9 256 69.5
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.0e-88 329.7 255 72.5
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 7.4e-88 327.8 253 70.4
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 1.7e-87 326.6 256 69.5
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.6e-85 320.1 247 72.9
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 4.5e-85 318.5 255 69.4
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 1.0e-84 317.4 254 70.1
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 3.8e-84 315.5 243 69.5
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 1.4e-81 307.0 255 68.2
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 1.8e-81 306.6 255 66.7
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 2.3e-81 306.2 254 68.9
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 2.3e-81 306.2 254 68.1
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 8.8e-81 304.3 253 66.8
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 3.3e-80 302.4 268 65.3
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 1.7e-79 300.1 253 66.4
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 1.8e-78 296.6 256 66.0
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 7.0e-78 294.7 255 62.0
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 1.2e-77 293.9 255 64.3
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 2.7e-77 292.7 256 64.1
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 2.7e-77 292.7 255 62.7
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 2.7e-77 292.7 255 63.9
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 5.9e-77 291.6 256 63.7
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 1.0e-76 290.8 256 63.3
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 1.0e-76 290.8 256 64.5
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 1.0e-76 290.8 256 64.1
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 6.5e-76 288.1 232 65.9
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 2.5e-75 286.2 256 62.9
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 3.2e-75 285.8 228 68.0
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 4.2e-75 285.4 256 61.3
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 9.4e-75 284.3 256 61.7
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 9.4e-75 284.3 255 62.7
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 3.6e-74 282.3 250 62.8
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 6.1e-74 281.6 256 63.7
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 8.0e-74 281.2 256 64.1
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 1.4e-73 280.4 250 64.0
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 2.0e-72 276.6 254 60.2
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 4.4e-72 275.4 253 60.1
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 4.4e-72 275.4 256 57.8
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 4.4e-72 275.4 259 60.6
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.7e-71 273.5 258 60.5
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 6.3e-71 271.6 240 62.5
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 6.3e-71 271.6 240 62.5
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 8.3e-71 271.2 254 60.2
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 1.6e-69 266.9 239 62.3
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 5.0e-68 261.9 238 61.3
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 2.5e-67 259.6 245 58.4
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 3.2e-67 259.2 243 59.3
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 1.2e-66 257.3 255 58.0
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 1.6e-66 256.9 148 93.9
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 3.6e-66 255.8 255 55.3
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 6.1e-66 255.0 238 58.8
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 1.0e-65 254.2 255 59.2
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 1.0e-65 254.2 311 49.8
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 1.4e-65 253.8 256 57.8
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 1.3e-63 247.3 243 57.2
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 1.7e-63 246.9 255 56.9
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 2.8e-63 246.1 243 54.7
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 1.8e-62 243.4 243 56.0
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 2.4e-62 243.0 243 58.0
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 2.4e-62 243.0 243 54.7
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 3.1e-62 242.7 243 57.2
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 4.1e-62 242.3 250 56.8
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 4.1e-62 242.3 243 56.8
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 2.7e-61 239.6 243 55.6
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 4.5e-61 238.8 246 56.1
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 5.9e-61 238.4 247 54.7
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 7.3e-59 231.5 255 52.5
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 3.6e-58 229.2 252 53.2
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 6.1e-58 228.4 255 52.9
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 1.4e-57 227.3 252 52.4
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 8.9e-57 224.6 255 51.8
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 3.4e-56 222.6 260 48.5
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 4.4e-56 222.2 255 51.8
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 1.3e-55 220.7 254 51.2
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 3.7e-55 219.2 251 51.4
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 3.7e-55 219.2 251 51.4
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 2.4e-54 216.5 248 51.6
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 2.4e-54 216.5 252 53.6
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 3.2e-54 216.1 255 50.6
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 9.2e-54 214.5 255 49.0
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 3.5e-53 212.6 258 50.0
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 3.9e-52 209.1 273 46.9
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 2.5e-51 206.5 273 46.5
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 5.8e-48 195.3 184 61.4
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 1.3e-47 194.1 254 44.5
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 4.6e-45 185.7 184 57.6
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 3.4e-40 169.5 268 41.0
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 1.7e-36 157.1 250 40.4
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 2.5e-35 153.3 245 38.0
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 4.3e-35 152.5 235 39.6
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 6.4e-23 112.1 184 40.2
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 4.8e-18 95.9 76 61.8
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 1.7e-15 87.4 169 40.8
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 1.7e-15 87.4 66 62.1
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 2.9e-07 60.1 75 50.7
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.4e-06 57.8 51 56.9


User provided reference genes

Program Settings