Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD03G1010000 Malus domestica HOM05D006265 ORTHO05D007822 6.7e-60 233.8 117 100.0
MD03G1010200 Malus domestica HOM05D006265 ORTHO05D007822 5.6e-14 81.3 148 38.5
MD03G1009900 Malus domestica HOM05D006265 ORTHO05D007822 5.2e-12 74.7 41 90.2
FAN16G3355 Fragaria x ananassa HOM05D006265 ORTHO05D007822 2.9e-10 68.9 41 82.9
FvH4_3g44840 Fragaria vesca HOM05D006265 ORTHO05D007822 1.4e-09 66.6 41 80.5
FAN11G1034 Fragaria x ananassa HOM05D004308 ORTHO05D005139 1.4e-09 66.6 41 80.5
FAN21G1794 Fragaria x ananassa HOM05D004308 ORTHO05D005139 1.4e-09 66.6 41 80.5
RcHm_v2.0_Chr5g0081541 Rosa chinensis HOM05D006265 ORTHO05D007822 1.4e-09 66.6 41 80.5
Cfa009611 Carpinus fangiana HOM05D006265 ORTHO05D007822 3.2e-09 65.5 41 78.0
Haze_22984 Corylus avellana HOM05D006265 ORTHO05D007822 3.2e-09 65.5 41 78.0
CANSAT80G0616 Cannabis sativa HOM05D006265 ORTHO05D007822 7.1e-09 64.3 39 82.1
FAN25G3608 Fragaria x ananassa HOM05D006265 ORTHO05D007822 7.1e-09 64.3 41 78.0
QL01p007989 Quercus lobata HOM05D006265 ORTHO05D007822 1.6e-08 63.2 41 73.2
HanXRQChr02g0056581 Helianthus annuus HOM05D006265 ORTHO05D007822 2.1e-08 62.8 41 68.3
PSO017G3167 Papaver somniferum HOM05D006265 ORTHO05D007822 3.5e-08 62.0 41 68.3
Duzib168G1214 Durio zibethinus HOM05D006265 ORTHO05D007822 6.0e-08 61.2 150 30.7
Dinv09750 Davidia involucrata HOM05D006265 ORTHO05D007822 1.0e-07 60.5 41 63.4
Oeu029371.1 Olea europaea HOM05D006265 ORTHO05D007822 1.3e-07 60.1 41 65.9
Thecc.09G212900 Theobroma cacao HOM05D006265 ORTHO05D007822 1.3e-07 60.1 41 70.7
Actinidia39362 Actinidia chinensis HOM05D006265 ORTHO05D007822 2.3e-07 59.3 41 70.7
COL.COLO4_34991 Corchorus olitorius HOM05D006265 ORTHO05D007822 2.3e-07 59.3 41 68.3
MBI13_g29632_MAGBIO Magnolia biondii HOM05D006265 ORTHO05D007822 2.3e-07 59.3 39 71.8
CiPaw.13G173200 Carya illinoinensis HOM05D006265 ORTHO05D007822 3.0e-07 58.9 41 70.7
Gohir.A08G011700 Gossypium hirsutum HOM05D006265 ORTHO05D007822 3.0e-07 58.9 41 68.3
Gohir.D08G022200 Gossypium hirsutum HOM05D006265 ORTHO05D007822 3.0e-07 58.9 41 68.3
Gorai.004G017500 Gossypium raimondii HOM05D006265 ORTHO05D007822 3.0e-07 58.9 41 68.3
vmacro04214 Vaccinium macrocarpon HOM05D006265 ORTHO05D007822 3.0e-07 58.9 41 68.3
vmacro22565 Vaccinium macrocarpon HOM05D006265 ORTHO05D007822 3.0e-07 58.9 41 68.3
MSTRG.18861 Avicennia marina HOM05D006265 ORTHO05D007822 5.1e-07 58.2 41 61.0
PSO170G6775 Papaver somniferum HOM05D006265 ORTHO05D007822 6.6e-07 57.8 41 65.9
Actinidia06291 Actinidia chinensis HOM05D006265 ORTHO05D007822 8.6e-07 57.4 41 68.3
Eucgr.J01792 Eucalyptus grandis HOM05D006265 ORTHO05D007822 8.6e-07 57.4 41 65.9
Nn2g15777 Nelumbo nucifera HOM05D006265 ORTHO05D007822 8.6e-07 57.4 41 68.3
Aqoxy1G00067 Aquilegia oxysepala HOM05D006265 ORTHO05D007822 1.1e-06 57.0 43 65.1
Oeu023936.1 Olea europaea HOM05D006265 ORTHO05D007822 1.1e-06 57.0 39 64.1
Rhsim13G0230200 Rhododendron simsii HOM05D006265 ORTHO05D007822 1.1e-06 57.0 41 63.4
Migut.D02531 Erythranthe guttata HOM05D006265 ORTHO05D007822 1.9e-06 56.2 41 56.1
PGR042G3578 Punica granatum HOM05D006265 ORTHO05D007822 2.5e-06 55.8 41 61.0
Sed0014267 Sechium edule HOM05D006265 ORTHO05D007822 2.5e-06 55.8 39 66.7
Cpa.g.c44017 Carica papaya HOM05D006265 ORTHO05D007822 3.3e-06 55.5 41 65.9
Cc01_g01630 Coffea canephora HOM05D006265 ORTHO05D007822 3.3e-06 55.5 41 58.5
SGA_v2.0_scaffold18G08319 Striga asiatica HOM05D006265 ORTHO05D007822 4.3e-06 55.1 41 61.0
MD03G1009300 Malus domestica HOM05D006265 ORTHO05D007822 7.3e-06 54.3 30 83.3
CSS0049900 Camellia sinensis var. sinensis HOM05D006265 ORTHO05D007822 9.5e-06 53.9 41 65.9
Lj2C715T2 Lonicera japonica HOM05D006265 ORTHO05D007822 9.5e-06 53.9 41 61.0
Prupe.6G010100 Prunus persica HOM05D006265 ORTHO05D007822 9.5e-06 53.9 31 83.9
GSVIVG01025406001 Vitis vinifera HOM05D006265 ORTHO05D007822 9.5e-06 53.9 41 68.3


User provided reference genes

Program Settings