Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1304800 Malus domestica HOM05D000212 ORTHO05D246465 7.6e-25 116.3 57 100.0
MD05G1122400 Malus domestica HOM05D000212 ORTHO05D000225 4.8e-11 70.5 57 68.4
MD10G1125000 Malus domestica HOM05D000212 ORTHO05D000225 2.6e-09 64.7 57 63.2
MBI05_g23376_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D000225 8.5e-08 59.7 56 55.4
ECA238G2354 Erigeron canadensis HOM05D000212 ORTHO05D000225 1.9e-07 58.5 55 56.4
Prupe.2G100400 Prunus persica HOM05D000212 ORTHO05D000225 2.5e-07 58.2 57 54.4
MBI12_g02802_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D000225 7.2e-07 56.6 56 51.8
MBI16_g07772_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D000225 7.2e-07 56.6 56 53.6
vmacro07687 Vaccinium macrocarpon HOM05D000212 ORTHO05D000225 7.2e-07 56.6 45 62.2
ECA233G1489 Erigeron canadensis HOM05D000212 ORTHO05D000225 9.4e-07 56.2 56 51.8
Hund00019 Selenicereus undatus HOM05D000212 ORTHO05D000225 9.4e-07 56.2 56 53.6
CiPaw.08G127900 Carya illinoinensis HOM05D000212 ORTHO05D000225 1.2e-06 55.8 56 55.4
CiPaw.08G128000 Carya illinoinensis HOM05D000212 ORTHO05D000225 1.2e-06 55.8 56 55.4
CDE02G4787 Ceratophyllum demersum HOM05D000212 ORTHO05D000225 1.2e-06 55.8 55 52.7
Gohir.A06G001900 Gossypium hirsutum HOM05D000212 ORTHO05D000225 1.2e-06 55.8 56 51.8
Gorai.010G002100 Gossypium raimondii HOM05D000212 ORTHO05D000225 1.2e-06 55.8 56 51.8
MBI16_g07773_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D000225 1.2e-06 55.8 56 53.6
Medtr7g094150 Medicago truncatula HOM05D000212 ORTHO05D000225 1.2e-06 55.8 56 53.6
AT5G42190 Arabidopsis thaliana HOM05D000212 ORTHO05D000225 1.6e-06 55.5 49 55.1
Carub.0008s0711 Capsella rubella HOM05D000212 ORTHO05D000225 1.6e-06 55.5 52 55.8
Ciclev10029465m.g Citrus clementina HOM05D000212 ORTHO05D000225 1.6e-06 55.5 56 51.8
Medtr7g094170 Medicago truncatula HOM05D000212 ORTHO05D000225 1.6e-06 55.5 56 53.6
Cpa.g.sc26.289 Carica papaya HOM05D000212 ORTHO05D000225 2.1e-06 55.1 56 51.8
Ciclev10002751m.g Citrus clementina HOM05D000212 ORTHO05D000225 2.1e-06 55.1 56 55.4
Cc01_g01930 Coffea canephora HOM05D000212 ORTHO05D000225 2.1e-06 55.1 45 57.8
Duzib041G0359 Durio zibethinus HOM05D000212 ORTHO05D000225 2.1e-06 55.1 56 50.0
HanXRQChr10g0300801 Helianthus annuus HOM05D000212 ORTHO05D000225 2.1e-06 55.1 41 63.4
HanXRQChr10g0300851 Helianthus annuus HOM05D000212 ORTHO05D000225 2.1e-06 55.1 41 63.4
MBI16_g07769_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D000225 2.1e-06 55.1 56 51.8
Medtr7g021400 Medicago truncatula HOM05D000212 ORTHO05D000225 2.1e-06 55.1 56 53.6
PSO349G0203 Papaver somniferum HOM05D000212 ORTHO05D000225 2.1e-06 55.1 56 48.2
PSO349G0222 Papaver somniferum HOM05D000212 ORTHO05D000225 2.1e-06 55.1 56 48.2
Potri.002G018700 Populus trichocarpa HOM05D000212 ORTHO05D000225 2.1e-06 55.1 56 51.8
Sabra05G0188200 Salix brachista HOM05D000212 ORTHO05D000225 2.1e-06 55.1 56 51.8
Sc08g0002880 Simmondsia chinensis HOM05D000212 ORTHO05D000225 2.1e-06 55.1 55 56.4
Aa31LG9G12340 Aethionema arabicum HOM05D000212 ORTHO05D000225 2.7e-06 54.7 56 51.8
CDE04G1245 Ceratophyllum demersum HOM05D000212 ORTHO05D000225 2.7e-06 54.7 55 52.7
AUR62018019 Chenopodium quinoa HOM05D000212 ORTHO05D000225 2.7e-06 54.7 55 52.7
Cc01_g01940 Coffea canephora HOM05D000212 ORTHO05D000225 2.7e-06 54.7 55 47.3
DCAR_022948 Daucus carota HOM05D000212 ORTHO05D000225 2.7e-06 54.7 55 50.9
ECA246G2895 Erigeron canadensis HOM05D000212 ORTHO05D000225 2.7e-06 54.7 56 55.4
Glyma.16G123700 Glycine max HOM05D000212 ORTHO05D000225 2.7e-06 54.7 56 53.6
PGR083G2463 Punica granatum HOM05D000212 ORTHO05D000225 2.7e-06 54.7 56 50.0
TWI56G1333 Tripterygium wilfordii HOM05D000212 ORTHO05D000225 2.7e-06 54.7 61 50.8
EL10Ac9g21374 Beta vulgaris HOM05D000212 ORTHO05D000225 3.6e-06 54.3 54 51.9
COL.COLO4_26111 Corchorus olitorius HOM05D000212 ORTHO05D000225 3.6e-06 54.3 56 50.0
Duzib093G1441 Durio zibethinus HOM05D000212 ORTHO05D000225 3.6e-06 54.3 56 53.6
Thhalv10012355m.g Eutrema salsugineum HOM05D000212 ORTHO05D000225 3.6e-06 54.3 54 51.9
Oeu007371.1 Olea europaea HOM05D000212 ORTHO05D000225 3.6e-06 54.3 57 52.6
Oeu007374.1 Olea europaea HOM05D000212 ORTHO05D000225 3.6e-06 54.3 57 52.6
PSO316G0001 Papaver somniferum HOM05D000212 ORTHO05D000225 3.6e-06 54.3 56 46.4
PSO732G0821 Papaver somniferum HOM05D000212 ORTHO05D000225 3.6e-06 54.3 56 46.4
Potri.004G175900 Populus trichocarpa HOM05D000212 ORTHO05D000225 3.6e-06 54.3 59 50.8
Potri.005G243100 Populus trichocarpa HOM05D000212 ORTHO05D000225 3.6e-06 54.3 56 50.0
Prupe.8G166100 Prunus persica HOM05D000212 ORTHO05D000225 3.6e-06 54.3 58 51.7
PGR119G1756 Punica granatum HOM05D000212 ORTHO05D000225 3.6e-06 54.3 56 53.6
Sabra04G0117800 Salix brachista HOM05D000212 ORTHO05D000225 3.6e-06 54.3 59 50.8
vmacro07686 Vaccinium macrocarpon HOM05D000212 ORTHO05D000225 3.6e-06 54.3 57 50.9
Atru.chr5.3326 Acer truncatum HOM05D000212 ORTHO05D000225 4.7e-06 53.9 55 56.4
CAN.G588.85 Capsicum annuum HOM05D000212 ORTHO05D000225 4.7e-06 53.9 60 53.3
Gohir.A02G172900 Gossypium hirsutum HOM05D000212 ORTHO05D000225 4.7e-06 53.9 56 53.6
Gohir.D03G007000 Gossypium hirsutum HOM05D000212 ORTHO05D000225 4.7e-06 53.9 56 53.6
Gorai.003G007300 Gossypium raimondii HOM05D000212 ORTHO05D000225 4.7e-06 53.9 56 53.6
Prupe.2G099500 Prunus persica HOM05D000212 ORTHO05D000225 4.7e-06 53.9 55 50.9
THA.LOC104811431 Tarenaya hassleriana HOM05D000212 ORTHO05D000225 4.7e-06 53.9 50 54.0
Ah.03g143160 Amaranthus hybridus HOM05D000212 ORTHO05D000225 6.1e-06 53.5 56 51.8
AUR62003708 Chenopodium quinoa HOM05D000212 ORTHO05D000225 6.1e-06 53.5 56 51.8
FAN27G3400 Fragaria x ananassa HOM05D005393 ORTHO05D006257 6.1e-06 53.5 56 55.4
Manes.01G149500 Manihot esculenta HOM05D000212 ORTHO05D000225 6.1e-06 53.5 56 50.0
PSO541G0774 Papaver somniferum HOM05D000212 ORTHO05D000225 6.1e-06 53.5 56 53.6
PSO675G4858 Papaver somniferum HOM05D000212 ORTHO05D000225 6.1e-06 53.5 56 53.6
Phvul.003G265900 Phaseolus vulgaris HOM05D000212 ORTHO05D000225 6.1e-06 53.5 56 51.8
Potri.005G109900 Populus trichocarpa HOM05D000212 ORTHO05D000225 6.1e-06 53.5 56 50.0
Prupe.1G361400 Prunus persica HOM05D000212 ORTHO05D000225 6.1e-06 53.5 56 55.4
TWI12G1390 Tripterygium wilfordii HOM05D000212 ORTHO05D000225 6.1e-06 53.5 56 48.2
VMungo0251G0327 Vigna mungo HOM05D000212 ORTHO05D000225 6.1e-06 53.5 56 51.8
Actinidia33561 Actinidia chinensis HOM05D000212 ORTHO05D000225 7.9e-06 53.1 48 58.3
AL8G19640 Arabidopsis lyrata HOM05D000212 ORTHO05D000225 7.9e-06 53.1 42 61.9
EL10Ac6g15161 Beta vulgaris HOM05D000212 ORTHO05D000225 7.9e-06 53.1 56 51.8
CSS0017695 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D000225 7.9e-06 53.1 48 50.0
CSS0049298 Camellia sinensis var. sinensis HOM05D000212 ORTHO05D000225 7.9e-06 53.1 42 61.9
CANSAT25G1647 Cannabis sativa HOM05D000212 ORTHO05D000225 7.9e-06 53.1 42 61.9
CARHR284690 Cardamine hirsuta HOM05D000212 ORTHO05D000225 7.9e-06 53.1 42 61.9
Cfa013988 Carpinus fangiana HOM05D000212 ORTHO05D000225 7.9e-06 53.1 58 53.4
CiPaw.07G145700 Carya illinoinensis HOM05D000212 ORTHO05D000225 7.9e-06 53.1 56 50.0
CiPaw.08G068300 Carya illinoinensis HOM05D000212 ORTHO05D000225 7.9e-06 53.1 56 50.0
CDE02G3993 Ceratophyllum demersum HOM05D000212 ORTHO05D000225 7.9e-06 53.1 45 57.8
ClCG10G000540 Citrullus lanatus HOM05D000212 ORTHO05D000225 7.9e-06 53.1 56 53.6
Haze_22674 Corylus avellana HOM05D000212 ORTHO05D000225 7.9e-06 53.1 42 61.9
HanXRQChr04g0112321 Helianthus annuus HOM05D000212 ORTHO05D000225 7.9e-06 53.1 56 51.8
MD15G1008400 Malus domestica HOM05D000212 ORTHO05D000225 7.9e-06 53.1 42 64.3
Psat2g152480 Pisum sativum HOM05D000212 ORTHO05D000225 7.9e-06 53.1 56 53.6
QL02p012407 Quercus lobata HOM05D000212 ORTHO05D000225 7.9e-06 53.1 42 61.9
THA.LOC104813223 Tarenaya hassleriana HOM05D000212 ORTHO05D000225 7.9e-06 53.1 41 63.4
TPR.G10539 Trifolium pratense HOM05D000212 ORTHO05D000225 7.9e-06 53.1 56 53.6


User provided reference genes

Program Settings