Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 5.2e-50 200.7 97 100.0
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 3.9e-21 104.8 79 68.4
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 4.3e-20 101.3 79 65.8
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 5.3e-18 94.4 83 59.0
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 5.3e-18 94.4 83 59.0
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 5.3e-18 94.4 83 59.0
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 5.3e-18 94.4 83 59.0
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 2.0e-17 92.4 81 60.5
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 2.9e-16 88.6 83 54.2
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 4.2e-15 84.7 81 54.3
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 3.5e-14 81.6 73 56.2
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 4.6e-14 81.3 84 51.2
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 4.6e-14 81.3 83 53.0
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 6.0e-14 80.9 84 52.4
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 1.3e-13 79.7 84 51.2
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 1.3e-13 79.7 81 53.1
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 1.3e-13 79.7 84 50.0
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 2.3e-13 79.0 81 51.9
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 6.7e-13 77.4 81 50.6
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 6.7e-13 77.4 73 56.2
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 1.1e-12 76.6 74 54.1
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 1.5e-12 76.3 69 58.0
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 1.9e-12 75.9 83 50.6
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 1.9e-12 75.9 73 54.8
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 3.3e-12 75.1 84 46.4
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 3.3e-12 75.1 81 49.4
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 4.3e-12 74.7 73 53.4
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 4.3e-12 74.7 84 47.6
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 7.4e-12 73.9 73 53.4
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 9.7e-12 73.6 74 52.7
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 9.7e-12 73.6 73 53.4
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 9.7e-12 73.6 74 52.7
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 9.7e-12 73.6 72 50.0
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 9.7e-12 73.6 73 53.4
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 1.3e-11 73.2 74 52.7
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 1.3e-11 73.2 69 52.2
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 3.7e-11 71.6 73 52.1
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 6.3e-11 70.9 72 51.4
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 6.3e-11 70.9 72 51.4
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 6.3e-11 70.9 72 51.4
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 6.3e-11 70.9 73 52.1
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 1.1e-10 70.1 69 55.1
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 1.1e-10 70.1 70 52.9
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 1.4e-10 69.7 73 50.7
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.4e-10 69.7 73 52.1
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.4e-10 69.7 73 52.1
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 1.4e-10 69.7 73 52.1
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 1.4e-10 69.7 71 53.5
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 2.4e-10 68.9 73 49.3
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 4.1e-10 68.2 81 45.7
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 5.3e-10 67.8 72 51.4
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 5.3e-10 67.8 72 51.4
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 6.9e-10 67.4 72 51.4
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 6.9e-10 67.4 81 43.2
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 2.6e-09 65.5 69 50.7
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 2.6e-09 65.5 72 47.2
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 3.4e-09 65.1 71 52.1
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 3.4e-09 65.1 72 48.6
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 4.5e-09 64.7 68 48.5
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 5.9e-09 64.3 69 50.7
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 7.6e-09 63.9 81 45.7
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 1.0e-08 63.5 68 52.9
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 1.0e-08 63.5 75 50.7
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 1.0e-08 63.5 75 49.3
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 1.0e-08 63.5 75 49.3
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 1.0e-08 63.5 75 49.3
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 2.2e-08 62.4 81 44.4
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 2.2e-08 62.4 73 45.2
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 2.9e-08 62.0 72 45.8
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 1.1e-07 60.1 72 44.4
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.4e-07 59.7 72 43.1
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 4.2e-07 58.2 104 35.6
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 5.5e-07 57.8 69 49.3
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 1.2e-06 56.6 72 45.8
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 1.6e-06 56.2 69 44.9
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 7.9e-06 53.9 64 45.3


User provided reference genes

Program Settings