Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1269600 Malus domestica HOM05D003733 ORTHO05D004035 1.6e-71 272.7 140 100.0
MD02G1269400 Malus domestica HOM05D003733 ORTHO05D004035 1.4e-40 169.9 235 48.1
Haze_03945 Corylus avellana HOM05D003733 ORTHO05D004035 2.5e-13 79.3 132 40.9
CSS0006986 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 1.3e-12 77.0 135 40.0
Cfa006814 Carpinus fangiana HOM05D003733 ORTHO05D004035 1.3e-12 77.0 132 40.2
RcHm_v2.0_Chr2g0109681 Rosa chinensis HOM05D003733 ORTHO05D004035 1.3e-12 77.0 163 38.0
CSS0020555 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 2.8e-12 75.9 135 40.0
GSVIVG01003708001 Vitis vinifera HOM05D003733 ORTHO05D004035 8.2e-12 74.3 137 40.1
QL06p037705 Quercus lobata HOM05D003733 ORTHO05D004035 4.1e-11 72.0 132 37.1
CSS0008611 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 1.5e-10 70.1 132 39.4
Actinidia36390 Actinidia chinensis HOM05D003733 ORTHO05D004035 2.6e-10 69.3 133 40.6
Nn1g05776 Nelumbo nucifera HOM05D003733 ORTHO05D004035 4.5e-10 68.6 132 37.9
Manes.12G120000 Manihot esculenta HOM05D003733 ORTHO05D004035 5.9e-10 68.2 145 37.2
TWI53G0148 Tripterygium wilfordii HOM05D003733 ORTHO05D004035 1.0e-09 67.4 130 37.7
TAR381G0096 Trochodendron aralioides HOM05D003733 ORTHO05D004035 2.2e-09 66.2 132 39.4
Glyma.01G097200 Glycine max HOM05D003733 ORTHO05D004035 2.9e-09 65.9 130 38.5
CiPaw.12G004300 Carya illinoinensis HOM05D003733 ORTHO05D004035 3.8e-09 65.5 131 41.2
Dinv26992 Davidia involucrata HOM05D003733 ORTHO05D004035 3.8e-09 65.5 132 40.2
Oeu054739.1 Olea europaea HOM05D003733 ORTHO05D004035 6.5e-09 64.7 136 35.3
vmacro07413 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 8.5e-09 64.3 133 37.6
TAR625G0952 Trochodendron aralioides HOM05D003733 ORTHO05D004035 1.9e-08 63.2 132 37.1
Phvul.003G285300 Phaseolus vulgaris HOM05D003733 ORTHO05D004035 5.5e-08 61.6 131 36.6
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 5.5e-08 61.6 133 34.6
Lj2g0016248 Lotus japonicus HOM05D003733 ORTHO05D004035 7.2e-08 61.2 133 36.8
Atru.chr3.1125_Atru.chr3.1126 Acer truncatum HOM05D003733 ORTHO05D004035 9.3e-08 60.8 130 36.2
Atru.chr3.1134_Atru.chr3.1135 Acer truncatum HOM05D003733 ORTHO05D004035 9.3e-08 60.8 130 36.2
Lj4g0014652 Lotus japonicus HOM05D003733 ORTHO05D004035 9.3e-08 60.8 131 32.8
vmacro20437 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 9.3e-08 60.8 130 36.9
Manes.13G105200 Manihot esculenta HOM05D003733 ORTHO05D004035 2.1e-07 59.7 131 37.4
Sabra07G0007400 Salix brachista HOM05D003733 ORTHO05D008786 2.7e-07 59.3 143 31.5
Lj3g0005458 Lotus japonicus HOM05D003733 ORTHO05D004035 3.6e-07 58.9 131 33.6
Actinidia11935 Actinidia chinensis HOM05D003733 ORTHO05D004035 4.6e-07 58.5 127 37.8
PSO832G4530 Papaver somniferum HOM05D003733 ORTHO05D004035 4.6e-07 58.5 135 36.3
Potri.007G009700 Populus trichocarpa HOM05D003733 ORTHO05D004035 6.1e-07 58.2 131 33.6
FvH4_1g18820 Fragaria vesca HOM05D003733 ORTHO05D004035 7.9e-07 57.8 50 58.0
FAN19G3013 Fragaria x ananassa HOM05D003733 ORTHO05D004035 7.9e-07 57.8 50 58.0
TAR376G0930 Trochodendron aralioides HOM05D003733 ORTHO05D004035 7.9e-07 57.8 131 38.2
VMungo0251G1204 Vigna mungo HOM05D003733 ORTHO05D004035 7.9e-07 57.8 132 34.8
Prupe.6G211200 Prunus persica HOM05D003733 ORTHO05D004035 1.3e-06 57.0 52 53.8
VMungo1309G1560 Vigna mungo HOM05D003733 ORTHO05D004035 1.8e-06 56.6 132 35.6
Psat2g135720 Pisum sativum HOM05D003733 ORTHO05D004035 3.0e-06 55.8 131 30.5
Glyma.08G272800 Glycine max HOM05D003733 ORTHO05D004035 6.7e-06 54.7 131 33.6
MD01G1046400 Malus domestica HOM05D003733 ORTHO05D004035 6.7e-06 54.7 55 50.9


User provided reference genes

Program Settings