Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1195000 Malus domestica HOM05D006557 ORTHO05D008177 2.2e-58 228.8 121 100.0
Prupe.2G153600 Prunus persica HOM05D006557 ORTHO05D008177 4.3e-33 144.8 118 70.3
FvH4_7g12930 Fragaria vesca HOM05D006557 ORTHO05D008177 4.7e-32 141.4 129 62.8
FAN06G2259 Fragaria x ananassa HOM05D006557 ORTHO05D008177 5.2e-31 137.9 130 62.3
FAN10G0459 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.5e-30 136.3 127 62.2
FAN03G1058 Fragaria x ananassa HOM05D006557 ORTHO05D008177 2.0e-30 136.0 130 61.5
FAN10G2465 Fragaria x ananassa HOM05D006557 ORTHO05D008177 2.0e-30 136.0 130 61.5
RcHm_v2.0_Chr1g0352061 Rosa chinensis HOM05D006557 ORTHO05D008177 1.3e-29 133.3 127 59.8
FAN01G0615 Fragaria x ananassa HOM05D006557 ORTHO05D008177 6.4e-29 131.0 130 59.2
TAR375G0852 Trochodendron aralioides HOM05D006557 ORTHO05D008177 8.3e-29 130.6 101 69.3
Ciclev10019481m.g Citrus clementina HOM05D006557 ORTHO05D008177 3.5e-27 125.2 124 59.7
Duzib133G0555 Durio zibethinus HOM05D006557 ORTHO05D008177 7.8e-27 124.0 126 57.9
Cfa004174 Carpinus fangiana HOM05D006557 ORTHO05D008177 1.0e-26 123.6 125 58.4
Rhsim01G0154800 Rhododendron simsii HOM05D006557 ORTHO05D008177 1.0e-26 123.6 101 67.3
QL08p050821 Quercus lobata HOM05D006557 ORTHO05D008177 1.7e-26 122.9 106 62.3
CiPaw.01G052200 Carya illinoinensis HOM05D006557 ORTHO05D008177 2.3e-26 122.5 106 61.3
Thecc.01G369600 Theobroma cacao HOM05D006557 ORTHO05D008177 3.0e-26 122.1 126 57.1
Haze_15235 Corylus avellana HOM05D006557 ORTHO05D008177 5.0e-26 121.3 125 56.8
Cc02_g37160 Coffea canephora HOM05D006557 ORTHO05D008177 8.6e-26 120.6 100 64.0
CSS0001854 Camellia sinensis var. sinensis HOM05D006557 ORTHO05D008177 1.1e-25 120.2 127 57.5
Atru.chr5.390 Acer truncatum HOM05D006557 ORTHO05D008177 1.9e-25 119.4 127 55.1
Atru.chr5.396 Acer truncatum HOM05D006557 ORTHO05D008177 1.9e-25 119.4 127 55.1
Aqoxy7G00469 Aquilegia oxysepala HOM05D006557 ORTHO05D008177 5.6e-25 117.9 127 55.1
GSVIVG01026363001 Vitis vinifera HOM05D006557 ORTHO05D008177 5.6e-25 117.9 112 61.6
Actinidia33449 Actinidia chinensis HOM05D006557 ORTHO05D008177 7.3e-25 117.5 118 59.3
Gohir.D07G150201 Gossypium hirsutum HOM05D006557 ORTHO05D008177 7.3e-25 117.5 126 54.0
MBI04_g40842_MAGBIO Magnolia biondii HOM05D006557 ORTHO05D008177 7.3e-25 117.5 126 54.8
Nn6g34278 Nelumbo nucifera HOM05D006557 ORTHO05D008177 7.3e-25 117.5 127 56.7
CANSAT56G3931 Cannabis sativa HOM05D006557 ORTHO05D008177 9.5e-25 117.1 103 59.2
MELO3C024600.2 Cucumis melo HOM05D006557 ORTHO05D008177 1.6e-24 116.3 111 58.6
Eucgr.E00220 Eucalyptus grandis HOM05D006557 ORTHO05D008177 1.6e-24 116.3 101 62.4
COL.COLO4_12633 Corchorus olitorius HOM05D006557 ORTHO05D008177 2.1e-24 115.9 104 60.6
PGSC0003DMG400000131 Solanum tuberosum HOM05D006557 ORTHO05D008177 2.1e-24 115.9 126 54.0
Sc02g0002240 Simmondsia chinensis HOM05D006557 ORTHO05D008177 2.8e-24 115.5 126 54.8
Solyc01g091860.4 Solanum lycopersicum HOM05D006557 ORTHO05D008177 3.6e-24 115.2 126 55.6
HanXRQChr04g0121771 Helianthus annuus HOM05D006557 ORTHO05D008177 4.7e-24 114.8 128 53.9
MSTRG.17229 Avicennia marina HOM05D006557 ORTHO05D008177 6.2e-24 114.4 114 56.1
Gohir.A07G144300 Gossypium hirsutum HOM05D006557 ORTHO05D008177 6.2e-24 114.4 126 52.4
Gorai.001G172000 Gossypium raimondii HOM05D006557 ORTHO05D008177 6.2e-24 114.4 126 52.4
Sopen01g037630 Solanum pennellii HOM05D006557 ORTHO05D008177 6.2e-24 114.4 126 54.8
Lalb_Chr01g0021061 Lupinus albus HOM05D006557 ORTHO05D008177 8.0e-24 114.0 110 58.2
Potri.014G077700 Populus trichocarpa HOM05D006557 ORTHO05D008177 8.0e-24 114.0 127 51.2
Manes.01G262900 Manihot esculenta HOM05D006557 ORTHO05D008177 1.4e-23 113.2 132 53.8
PGR042G0062 Punica granatum HOM05D006557 ORTHO05D008177 1.4e-23 113.2 100 61.0
TWI23G0976 Tripterygium wilfordii HOM05D006557 ORTHO05D008177 1.8e-23 112.8 124 55.6
Nitab4.5_0006706g0040 Nicotiana tabacum HOM05D006557 ORTHO05D008177 3.1e-23 112.1 112 58.9
Peaxi162Scf00021g00314 Petunia axillaris HOM05D006557 ORTHO05D008177 3.1e-23 112.1 94 64.9
Hund27329 Selenicereus undatus HOM05D006557 ORTHO05D008177 4.0e-23 111.7 101 59.4
ECA236G4623 Erigeron canadensis HOM05D006557 ORTHO05D008177 5.2e-23 111.3 126 52.4
PSO478G0993 Papaver somniferum HOM05D006557 ORTHO05D008177 6.8e-23 110.9 99 61.6
CsaV3_6G041250 Cucumis sativus L. HOM05D006557 ORTHO05D008177 8.9e-23 110.5 120 51.7
Lj1g0000530 Lotus japonicus HOM05D006557 ORTHO05D008177 8.9e-23 110.5 114 55.3
Nitab4.5_0009025g0010 Nicotiana tabacum HOM05D006557 ORTHO05D008177 8.9e-23 110.5 127 51.2
Sp1g00380 Schrenkiella parvula HOM05D006557 ORTHO05D008177 1.2e-22 110.2 108 55.6
Sed0001202 Sechium edule HOM05D006557 ORTHO05D008177 1.5e-22 109.8 101 59.4
vmacro04846 Vaccinium macrocarpon HOM05D006557 ORTHO05D008177 1.5e-22 109.8 125 52.8
BraA09t42268Z Brassica rapa HOM05D006557 ORTHO05D008177 2.0e-22 109.4 107 55.1
CARHR000440 Cardamine hirsuta HOM05D006557 ORTHO05D008177 2.0e-22 109.4 102 57.8
Oeu058605.1 Olea europaea HOM05D006557 ORTHO05D008177 2.0e-22 109.4 127 50.4
AL1G10410 Arabidopsis lyrata HOM05D006557 ORTHO05D008177 2.6e-22 109.0 102 57.8
ClCG01G015140 Citrullus lanatus HOM05D006557 ORTHO05D008177 2.6e-22 109.0 127 50.4
Thhalv10007294m.g Eutrema salsugineum HOM05D006557 ORTHO05D008177 2.6e-22 109.0 106 54.7
Aa31LG1G11240 Aethionema arabicum HOM05D006557 ORTHO05D008177 3.4e-22 108.6 127 48.0
C08p53930 Brassica napus HOM05D006557 ORTHO05D008177 3.4e-22 108.6 108 53.7
BolC8t52906H Brassica oleracea HOM05D006557 ORTHO05D008177 3.4e-22 108.6 108 53.7
Glyma.18G228300 Glycine max HOM05D006557 ORTHO05D008177 3.4e-22 108.6 114 57.0
Lsat_1_v5_gn_7_8181 Lactuca sativa HOM05D006557 ORTHO05D008177 4.4e-22 108.2 109 55.0
DCAR_008582 Daucus carota HOM05D006557 ORTHO05D008177 5.8e-22 107.8 127 49.6
AUR62004285 Chenopodium quinoa HOM05D006557 ORTHO05D008177 7.5e-22 107.5 94 60.6
Phvul.008G069900 Phaseolus vulgaris HOM05D006557 ORTHO05D008177 2.9e-21 105.5 114 51.8
TPR.G37774 Trifolium pratense HOM05D006557 ORTHO05D008177 2.9e-21 105.5 123 49.6
Carub.0001s0032 Capsella rubella HOM05D006557 ORTHO05D008177 3.7e-21 105.1 110 50.9
Psat3g112120 Pisum sativum HOM05D006557 ORTHO05D008177 3.7e-21 105.1 124 49.2
Sabra14G0054700 Salix brachista HOM05D006557 ORTHO05D008177 3.7e-21 105.1 151 45.0
EL10Ac1g00969 Beta vulgaris HOM05D006557 ORTHO05D008177 4.9e-21 104.8 102 56.9
Glyma.09G263800 Glycine max HOM05D006557 ORTHO05D008177 4.9e-21 104.8 124 49.2
Hma1.2p1_0033F.1_g020720 Hydrangea macrophylla HOM05D006557 ORTHO05D008177 6.4e-21 104.4 70 75.7
arahy.Tifrunner.gnm1.ann1.P0RXA9 Arachis hypogaea HOM05D006557 ORTHO05D008177 8.3e-21 104.0 117 53.0
AUR62033372 Chenopodium quinoa HOM05D006557 ORTHO05D008177 1.4e-20 103.2 125 48.0
Migut.B01677 Erythranthe guttata HOM05D006557 ORTHO05D008177 4.1e-20 101.7 109 53.2
Medtr7g076590 Medicago truncatula HOM05D006557 ORTHO05D008177 7.0e-20 100.9 123 49.6
Dinv32417 Davidia involucrata HOM05D006557 ORTHO05D008177 1.2e-19 100.1 73 74.0
Lj9A576T36 Lonicera japonica HOM05D006557 ORTHO05D008177 1.2e-19 100.1 69 71.0
HPP92_025368 Vanilla planifolia HOM05D006557 ORTHO05D008177 3.5e-19 98.6 96 52.1
HPP92_025494 Vanilla planifolia HOM05D006557 ORTHO05D008177 3.5e-19 98.6 96 52.1
CDE11G0468 Ceratophyllum demersum HOM05D006557 ORTHO05D008177 3.9e-18 95.1 134 43.3
ATR0757G115 Amborella trichopoda HOM05D006557 ORTHO05D008177 2.5e-17 92.4 106 51.9
SalBow3G2355 Salvia bowleyana HOM05D006557 ORTHO05D008177 4.3e-17 91.7 117 47.0
Pp3c20_15200 Physcomitrium patens HOM05D006557 ORTHO05D008177 5.6e-17 91.3 102 45.1
CSS0034846 Camellia sinensis var. sinensis HOM05D006557 ORTHO05D008177 3.1e-15 85.5 81 56.8
FAN06G3640 Fragaria x ananassa HOM05D006557 ORTHO05D008177 8.9e-15 84.0 101 52.5
Zm00001eb269430 Zea mays HOM05D006557 ORTHO05D008177 5.8e-14 81.3 95 49.5
unitig_8.g3814 Utricularia gibba HOM05D006557 ORTHO05D008177 3.2e-12 75.5 95 45.3
Os06g0127200 Oryza sativa ssp. japonica HOM05D006557 ORTHO05D008177 1.6e-11 73.2 112 42.0
AagrBONN_evm.TU.Sc2ySwM_228.962 Anthoceros agrestis HOM05D006557 ORTHO05D008177 3.9e-10 68.6 92 40.2
CAN.G170.57 Capsicum annuum HOM05D006557 ORTHO05D008177 6.6e-10 67.8 106 44.3
Mapoly0052s0068 Marchantia polymorpha HOM05D006557 ORTHO05D008177 1.5e-09 66.6 111 41.4
SMO165G0089 Selaginella moellendorffii HOM05D006557 ORTHO05D008177 7.3e-09 64.3 96 41.7
unitig_31.g34034 Utricularia gibba HOM05D006557 ORTHO05D008177 8.9e-07 57.4 96 41.7
VMungo1383G3400 Vigna mungo HOM05D006557 ORTHO05D008177 4.4e-06 55.1 37 67.6
arahy.Tifrunner.gnm1.ann1.1L2ERA Arachis hypogaea HOM05D006557 ORTHO05D008177 7.6e-06 54.3 38 65.8


User provided reference genes

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