Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1171100 Malus domestica HOM05D000135 ORTHO05D000203 2.6e-54 216.1 207 100.0
MD15G1282600 Malus domestica HOM05D000135 ORTHO05D000203 1.8e-31 140.2 93 81.7
FAN19G0794 Fragaria x ananassa HOM05D000135 ORTHO05D000203 1.2e-24 117.5 89 68.5
FvH4_1g15930 Fragaria vesca HOM05D000135 ORTHO05D000203 1.1e-20 104.4 74 71.6
FAN26G2503 Fragaria x ananassa HOM05D000955 ORTHO05D003340 2.1e-19 100.1 74 68.9
Prupe.7G134500 Prunus persica HOM05D000135 ORTHO05D000203 4.3e-17 92.4 64 75.0
QL06p041758 Quercus lobata HOM05D000135 ORTHO05D000203 8.1e-16 88.2 91 60.4
Thecc.01G054700 Theobroma cacao HOM05D000135 ORTHO05D000203 6.4e-13 78.6 89 56.2
COL.COLO4_11402 Corchorus olitorius HOM05D000135 ORTHO05D000203 8.4e-13 78.2 93 52.7
Gohir.A11G191800 Gossypium hirsutum HOM05D000135 ORTHO05D000203 8.4e-13 78.2 89 53.9
Gohir.D11G198300 Gossypium hirsutum HOM05D000135 ORTHO05D000203 8.4e-13 78.2 89 53.9
Gorai.007G212400 Gossypium raimondii HOM05D000135 ORTHO05D000203 8.4e-13 78.2 89 53.9
RcHm_v2.0_Chr2g0105321 Rosa chinensis HOM05D000135 ORTHO05D000203 8.4e-13 78.2 68 66.2
Duzib187G0789 Durio zibethinus HOM05D000135 ORTHO05D000203 3.2e-12 76.3 84 56.0
CiPaw.01G018900 Carya illinoinensis HOM05D000135 ORTHO05D000203 1.6e-11 73.9 91 51.6
FAN23G1378 Fragaria x ananassa HOM05D000135 ORTHO05D000203 2.1e-11 73.6 43 79.1
Atru.chr3.341 Acer truncatum HOM05D000135 ORTHO05D000203 3.5e-11 72.8 96 47.9
Duzib147G1692 Durio zibethinus HOM05D000135 ORTHO05D000203 3.5e-11 72.8 89 53.9
Gohir.D03G021400 Gossypium hirsutum HOM05D000135 ORTHO05D000203 1.0e-10 71.2 88 44.3
Gorai.003G023100 Gossypium raimondii HOM05D000135 ORTHO05D000203 1.0e-10 71.2 88 44.3
Ciclev10029994m.g Citrus clementina HOM05D000135 ORTHO05D000203 1.3e-10 70.9 89 50.6
TPR.G21277 Trifolium pratense HOM05D000135 ORTHO05D000203 3.9e-10 69.3 90 47.8
Ca_24776_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 8.7e-10 68.2 88 45.5
Haze_15414 Corylus avellana HOM05D000135 ORTHO05D000203 8.7e-10 68.2 86 45.3
Actinidia36498 Actinidia chinensis HOM05D000135 ORTHO05D000203 1.5e-09 67.4 89 46.1
Psat2g166920 Pisum sativum HOM05D000135 ORTHO05D000203 5.6e-09 65.5 79 43.0
Cfa004010 Carpinus fangiana HOM05D000135 ORTHO05D000203 7.3e-09 65.1 86 44.2
Aqoxy5G01242 Aquilegia oxysepala HOM05D000135 ORTHO05D000203 9.6e-09 64.7 88 42.0
Phvul.002G019300 Phaseolus vulgaris HOM05D000135 ORTHO05D000203 9.6e-09 64.7 91 46.2
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 1.2e-08 64.3 105 40.0
VMungo1215G0656 Vigna mungo HOM05D000135 ORTHO05D000203 1.2e-08 64.3 91 46.2
Potri.007G042900 Populus trichocarpa HOM05D000135 ORTHO05D000203 1.6e-08 63.9 104 41.3
Manes.07G082600 Manihot esculenta HOM05D000135 ORTHO05D000203 2.1e-08 63.5 88 40.9
Glyma.11G056500 Glycine max HOM05D000135 ORTHO05D000203 3.6e-08 62.8 91 41.8
CANSAT01G1352 Cannabis sativa HOM05D000135 ORTHO05D000203 4.7e-08 62.4 89 37.1
Medtr5g017550 Medicago truncatula HOM05D000135 ORTHO05D000203 4.7e-08 62.4 88 40.9
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 4.7e-08 62.4 89 42.7
Lalb_Chr16g0378511 Lupinus albus HOM05D000135 ORTHO05D000203 6.2e-08 62.0 97 41.2
Atru.chr5.2711 Acer truncatum HOM05D000135 ORTHO05D000203 8.1e-08 61.6 94 41.5
Sabra07G0038000 Salix brachista HOM05D000135 ORTHO05D000203 8.1e-08 61.6 106 43.4
TWI79G0422 Tripterygium wilfordii HOM05D000135 ORTHO05D000203 8.1e-08 61.6 86 43.0
arahy.Tifrunner.gnm1.ann1.77Y3FG Arachis hypogaea HOM05D000135 ORTHO05D000203 1.1e-07 61.2 63 46.0
Manes.13G127700 Manihot esculenta HOM05D000135 ORTHO05D000203 1.1e-07 61.2 77 50.6
RcHm_v2.0_Chr6g0257051 Rosa chinensis HOM05D000135 ORTHO05D000203 1.1e-07 61.2 89 40.4
Aqoxy5G01243 Aquilegia oxysepala HOM05D000135 ORTHO05D000203 1.4e-07 60.8 86 43.0
arahy.Tifrunner.gnm1.ann1.D3D30P Arachis hypogaea HOM05D000135 ORTHO05D000203 1.4e-07 60.8 63 46.0
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.4e-07 60.8 111 34.2
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.4e-07 60.8 111 34.2
Hma1.2p1_0370F.1_g137840 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 1.4e-07 60.8 81 46.9
CANSAT25G3257 Cannabis sativa HOM05D000135 ORTHO05D000203 1.8e-07 60.5 89 42.7
Glyma.01G185600 Glycine max HOM05D000135 ORTHO05D000203 1.8e-07 60.5 91 41.8
PSO170G0143 Papaver somniferum HOM05D000135 ORTHO05D000203 1.8e-07 60.5 87 41.4
PSO210G1763 Papaver somniferum HOM05D000135 ORTHO05D000203 1.8e-07 60.5 87 41.4
Potri.009G102500 Populus trichocarpa HOM05D000135 ORTHO05D000203 2.4e-07 60.1 88 40.9
Sc18g0004060 Simmondsia chinensis HOM05D000135 ORTHO05D000203 2.4e-07 60.1 89 42.7
Cc02_g18730 Coffea canephora HOM05D000135 ORTHO05D000203 3.1e-07 59.7 80 46.2
Glyma.17G175400 Glycine max HOM05D000135 ORTHO05D000203 3.1e-07 59.7 81 44.4
TAR628G0143 Trochodendron aralioides HOM05D000135 ORTHO05D000203 4.0e-07 59.3 88 40.9
TAR628G0636 Trochodendron aralioides HOM05D000135 ORTHO05D000203 4.0e-07 59.3 88 40.9
CiPaw.05G006300 Carya illinoinensis HOM05D000135 ORTHO05D000203 5.3e-07 58.9 89 41.6
TAR381G0503 Trochodendron aralioides HOM05D000135 ORTHO05D000203 5.3e-07 58.9 88 40.9
Cfa004515 Carpinus fangiana HOM05D000135 ORTHO05D000203 9.0e-07 58.2 88 39.8
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.2e-06 57.8 91 35.2
HanXRQChr14g0442861 Helianthus annuus HOM05D000135 ORTHO05D000203 1.2e-06 57.8 95 38.9
Peaxi162Scf00917g00042 Petunia axillaris HOM05D000135 ORTHO05D000203 1.2e-06 57.8 69 49.3
ECA238G2850 Erigeron canadensis HOM05D000135 ORTHO05D000203 1.5e-06 57.4 89 40.4
FvH4_2g06140 Fragaria vesca HOM05D000135 ORTHO05D000203 1.5e-06 57.4 88 36.4
Lj2g0000548 Lotus japonicus HOM05D000135 ORTHO05D000203 1.5e-06 57.4 91 39.6
MD05G1080100 Malus domestica HOM05D000135 ORTHO05D000203 1.5e-06 57.4 89 40.4
Glyma.05G085200 Glycine max HOM05D000135 ORTHO05D000203 2.0e-06 57.0 81 45.7
Prupe.8G123900 Prunus persica HOM05D000135 ORTHO05D000203 2.0e-06 57.0 89 41.6
TWI53G1405 Tripterygium wilfordii HOM05D000135 ORTHO05D000203 2.6e-06 56.6 79 40.5
AUR62013838 Chenopodium quinoa HOM05D000135 ORTHO05D000203 4.4e-06 55.8 80 42.5
Hma1.2p1_0461F.1_g157890 Hydrangea macrophylla HOM05D000135 ORTHO05D000203 4.4e-06 55.8 78 44.9
Nitab4.5_0006001g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000203 4.4e-06 55.8 59 50.8
Solyc01g108190.3 Solanum lycopersicum HOM05D000135 ORTHO05D000203 4.4e-06 55.8 79 43.0
VMungo0251G3415 Vigna mungo HOM05D000135 ORTHO05D000203 4.4e-06 55.8 91 35.2
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 5.8e-06 55.5 79 44.3
PGR142G2931 Punica granatum HOM05D000135 ORTHO05D000203 5.8e-06 55.5 94 43.6
ClCG02G012820 Citrullus lanatus HOM05D000135 ORTHO05D000203 7.6e-06 55.1 77 41.6
Lj4g0025559 Lotus japonicus HOM05D000135 ORTHO05D000203 7.6e-06 55.1 77 39.0
Manes.10G056100 Manihot esculenta HOM05D000135 ORTHO05D000203 7.6e-06 55.1 89 40.4
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 7.6e-06 55.1 92 42.4
GSVIVG01031752001 Vitis vinifera HOM05D000135 ORTHO05D000203 7.6e-06 55.1 89 41.6
Ca_18679_v3 Cicer arietinum L. HOM05D000135 ORTHO05D000203 9.9e-06 54.7 78 43.6
QL11p035985 Quercus lobata HOM05D000135 ORTHO05D000203 9.9e-06 54.7 87 37.9
PGSC0003DMG402025892 Solanum tuberosum HOM05D000135 ORTHO05D000203 9.9e-06 54.7 79 41.8


User provided reference genes

Program Settings