Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1162100 Malus domestica HOM05D000254 ORTHO05D048693 8.3e-21 102.8 54 100.0
ECA233G4777 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.6e-09 63.5 48 64.6
ECA236G2413 Erigeron canadensis HOM05D000254 ORTHO05D000165 5.6e-09 63.5 48 64.6
LjContig00357g0001689 Lotus japonicus HOM05D000254 ORTHO05D000165 5.6e-09 63.5 48 62.5
Lj2g0010951 Lotus japonicus HOM05D000254 ORTHO05D000165 1.2e-08 62.4 48 60.4
Lj3g0007908 Lotus japonicus HOM05D000254 ORTHO05D000165 1.2e-08 62.4 48 60.4
Lj5g0017104 Lotus japonicus HOM05D000254 ORTHO05D000165 1.2e-08 62.4 48 60.4
Glyma.03G038400 Glycine max HOM05D000254 ORTHO05D000165 2.1e-08 61.6 49 59.2
TPR.G8984 Trifolium pratense HOM05D000254 ORTHO05D000165 4.7e-08 60.5 47 61.7
ECA233G1917 Erigeron canadensis HOM05D000254 ORTHO05D000165 8.0e-08 59.7 48 60.4
Lj4g0018617 Lotus japonicus HOM05D000254 ORTHO05D000165 8.0e-08 59.7 48 58.3
TPR.G39467 Trifolium pratense HOM05D000254 ORTHO05D000165 8.0e-08 59.7 48 58.3
Glyma.18G159600 Glycine max HOM05D000254 ORTHO05D000165 1.0e-07 59.3 48 58.3
ECA240G3154 Erigeron canadensis HOM05D000164 ORTHO05D000096 1.8e-07 58.5 48 56.2
Glyma.13G083900 Glycine max HOM05D000254 ORTHO05D000165 1.8e-07 58.5 48 58.3
Glyma.18G248800 Glycine max HOM05D000254 ORTHO05D000165 1.8e-07 58.5 48 56.2
Glyma.19G129100 Glycine max HOM05D000254 ORTHO05D000165 1.8e-07 58.5 48 58.3
Sopen11g008380 Solanum pennellii HOM05D000254 ORTHO05D000165 2.3e-07 58.2 48 60.4
TWI38G0087 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 2.3e-07 58.2 48 58.3
Lj3g0019729 Lotus japonicus HOM05D000254 ORTHO05D000165 3.1e-07 57.8 44 61.4
Lj2g0009562 Lotus japonicus HOM05D000254 ORTHO05D000165 4.0e-07 57.4 48 56.2
PSO675G1195 Papaver somniferum HOM05D000254 ORTHO05D000165 4.0e-07 57.4 47 57.4
CSS0012288 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.2e-07 57.0 50 56.0
RcHm_v2.0_Chr1g0380371 Rosa chinensis HOM05D000254 ORTHO05D000165 5.2e-07 57.0 50 56.0
Medtr8g009340 Medicago truncatula HOM05D000254 ORTHO05D000165 6.8e-07 56.6 48 52.1
Migut.O00020 Erythranthe guttata HOM05D000254 ORTHO05D000165 8.9e-07 56.2 51 54.9
TWI73G0364 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 8.9e-07 56.2 47 55.3
Glyma.10G055700 Glycine max HOM05D000254 ORTHO05D000165 1.2e-06 55.8 48 58.3
Glyma.11G176303 Glycine max HOM05D000254 ORTHO05D000165 1.2e-06 55.8 48 58.3
Sopen09g021430 Solanum pennellii HOM05D000254 ORTHO05D000165 1.2e-06 55.8 48 56.2
AL8G12450 Arabidopsis lyrata HOM05D000605 ORTHO05D003395 1.5e-06 55.5 48 54.2
CSS0016186 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 1.5e-06 55.5 48 56.2
Ciclev10003272m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.5e-06 55.5 49 59.2
Ciclev10017601m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.5e-06 55.5 49 59.2
TPR.G22991 Trifolium pratense HOM05D000254 ORTHO05D000165 1.5e-06 55.5 47 51.1
CSS0006270 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.0e-06 55.1 48 58.3
CSS0022107 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.0e-06 55.1 48 56.2
CSS0026595 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.0e-06 55.1 49 57.1
CSS0033010 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.0e-06 55.1 50 52.0
FvH4_3g37321 Fragaria vesca HOM05D000254 ORTHO05D000165 2.0e-06 55.1 48 60.4
Medtr4g011480 Medicago truncatula HOM05D000254 ORTHO05D048693 2.0e-06 55.1 45 53.3
Oeu047881.1 Olea europaea HOM05D000254 ORTHO05D000165 2.0e-06 55.1 47 59.6
PGSC0003DMG400000259 Solanum tuberosum HOM05D000254 ORTHO05D000165 2.0e-06 55.1 48 54.2
CSS0000948 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.6e-06 54.7 48 54.2
CSS0026480 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 2.6e-06 54.7 48 54.2
Glyma.01G054700 Glycine max HOM05D000254 ORTHO05D000165 2.6e-06 54.7 48 58.3
Lj1g0025794 Lotus japonicus HOM05D000254 ORTHO05D000165 2.6e-06 54.7 48 54.2
Lj5g0016684 Lotus japonicus HOM05D000254 ORTHO05D000165 2.6e-06 54.7 48 54.2
MD09G1280500 Malus domestica HOM05D000254 ORTHO05D000165 2.6e-06 54.7 50 54.0
Oeu059570.1 Olea europaea HOM05D000254 ORTHO05D000165 2.6e-06 54.7 49 55.1
TPR.G18786 Trifolium pratense HOM05D000254 ORTHO05D000165 2.6e-06 54.7 47 55.3
TPR.G22178 Trifolium pratense HOM05D000254 ORTHO05D000165 2.6e-06 54.7 48 58.3
Thhalv10002330m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 3.4e-06 54.3 48 54.2
Glyma.18G136400 Glycine max HOM05D000254 ORTHO05D000165 3.4e-06 54.3 48 56.2
Glyma.U031215 Glycine max HOM05D000254 ORTHO05D000165 3.4e-06 54.3 48 54.2
Lj3g0023878 Lotus japonicus HOM05D000254 ORTHO05D000165 3.4e-06 54.3 47 59.6
PSO170G0724 Papaver somniferum HOM05D000254 ORTHO05D000165 3.4e-06 54.3 48 56.2
THA.LOC104799914 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 3.4e-06 54.3 48 54.2
THA.LOC104824679 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 3.4e-06 54.3 48 54.2
THA.LOC104827337 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 3.4e-06 54.3 48 54.2
Thhalv10002288m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 4.4e-06 53.9 49 53.1
Lj3g0010531 Lotus japonicus HOM05D000254 ORTHO05D000165 4.4e-06 53.9 42 59.5
Lj3g0020482 Lotus japonicus HOM05D000254 ORTHO05D000165 4.4e-06 53.9 48 54.2
Lj3g0023822 Lotus japonicus HOM05D000254 ORTHO05D000165 4.4e-06 53.9 44 59.1
Oeu001455.1 Olea europaea HOM05D000254 ORTHO05D000165 4.4e-06 53.9 49 53.1
CSS0016073 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.8e-06 53.5 50 50.0
Lj1g0021543 Lotus japonicus HOM05D000254 ORTHO05D000165 5.8e-06 53.5 48 54.2
Lj3g0000312 Lotus japonicus HOM05D000254 ORTHO05D000165 5.8e-06 53.5 47 59.6
Lj3g0023514 Lotus japonicus HOM05D000254 ORTHO05D000165 5.8e-06 53.5 47 59.6
Oeu026773.1 Olea europaea HOM05D000254 ORTHO05D000165 5.8e-06 53.5 47 57.4
PSO173G0048 Papaver somniferum HOM05D000254 ORTHO05D000165 5.8e-06 53.5 47 51.1
QL08p029111 Quercus lobata HOM05D000254 ORTHO05D000165 5.8e-06 53.5 48 50.0
CARHR261190 Cardamine hirsuta HOM05D000254 ORTHO05D000165 7.5e-06 53.1 48 52.1
Thhalv10002275m.g Eutrema salsugineum HOM05D000254 ORTHO05D000165 7.5e-06 53.1 48 54.2
Glyma.12G115000 Glycine max HOM05D000254 ORTHO05D000165 7.5e-06 53.1 44 56.8
Glyma.19G047200 Glycine max HOM05D000254 ORTHO05D000165 7.5e-06 53.1 48 54.2
MD03G1081700 Malus domestica HOM05D000254 ORTHO05D000165 7.5e-06 53.1 48 54.2
PSO063G6635 Papaver somniferum HOM05D000254 ORTHO05D000165 7.5e-06 53.1 47 53.2
TPR.G3195 Trifolium pratense HOM05D000254 ORTHO05D000165 7.5e-06 53.1 47 55.3
CSS0031525 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D004287 9.8e-06 52.8 48 56.2
Ciclev10007751m.g Citrus clementina HOM05D000254 ORTHO05D000165 9.8e-06 52.8 48 52.1
Ciclev10023986m.g Citrus clementina HOM05D000254 ORTHO05D000165 9.8e-06 52.8 48 52.1
Ciclev10029993m.g Citrus clementina HOM05D000254 ORTHO05D000165 9.8e-06 52.8 48 52.1
FvH4_3g43192 Fragaria vesca HOM05D000254 ORTHO05D000165 9.8e-06 52.8 50 52.0
FvH4_3g43193 Fragaria vesca HOM05D000254 ORTHO05D000165 9.8e-06 52.8 50 52.0
Hund14883 Selenicereus undatus HOM05D000254 ORTHO05D000165 9.8e-06 52.8 47 51.1
THA.LOC104825349 Tarenaya hassleriana HOM05D000254 ORTHO05D000165 9.8e-06 52.8 47 55.3
TWI75G0257 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 9.8e-06 52.8 48 50.0


User provided reference genes

Program Settings