Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1124600 Malus domestica HOM05D004723 ORTHO05D006176 3.9e-296 1021.1 705 100.0
Prupe.7G173800 Prunus persica HOM05D004723 ORTHO05D006176 7.8e-228 794.3 708 75.7
Atru.chr3.886 Acer truncatum HOM05D004723 ORTHO05D006176 1.1e-176 624.4 642 64.0
Atru.chr3.897 Acer truncatum HOM05D004723 ORTHO05D006176 1.1e-176 624.4 642 64.0
FAN26G3228 Fragaria x ananassa HOM05D004723 ORTHO05D006176 4.1e-176 622.5 701 61.5
FAN19G1371 Fragaria x ananassa HOM05D004723 ORTHO05D006176 4.5e-175 619.0 700 66.6
FvH4_1g11200 Fragaria vesca HOM05D004723 ORTHO05D006176 7.6e-175 618.2 703 66.7
RcHm_v2.0_Chr2g0098611 Rosa chinensis HOM05D004723 ORTHO05D006176 1.3e-171 607.4 727 63.3
Potri.005G108800 Populus trichocarpa HOM05D004723 ORTHO05D006176 6.7e-171 605.1 652 67.2
TWI09G0244 Tripterygium wilfordii HOM05D004723 ORTHO05D006176 3.3e-170 602.8 647 63.7
Sabra05G0089200 Salix brachista HOM05D004723 ORTHO05D006176 5.7e-170 602.1 656 66.8
Manes.10G142700 Manihot esculenta HOM05D004723 ORTHO05D006176 5.3e-168 595.5 649 59.9
Haze_03712 Corylus avellana HOM05D004723 ORTHO05D006176 1.5e-167 594.0 716 56.7
Eucgr.I02314 Eucalyptus grandis HOM05D004723 ORTHO05D006176 1.7e-166 590.5 650 57.8
Cfa007019 Carpinus fangiana HOM05D004723 ORTHO05D006176 1.9e-165 587.0 711 57.0
GSVIVG01007226001 Vitis vinifera HOM05D004723 ORTHO05D006176 3.2e-165 586.3 610 59.7
QL06p051414 Quercus lobata HOM05D004723 ORTHO05D006176 9.4e-165 584.7 655 64.9
CiPaw.07G062200 Carya illinoinensis HOM05D004723 ORTHO05D006176 2.1e-164 583.6 647 59.5
Sed0008382 Sechium edule HOM05D004723 ORTHO05D006176 7.9e-164 581.6 655 60.3
Gorai.012G044400 Gossypium raimondii HOM05D004723 ORTHO05D006176 1.5e-162 577.4 650 60.5
Sc07g0001170 Simmondsia chinensis HOM05D004723 ORTHO05D006176 1.7e-161 573.9 655 65.3
Nn5g30820 Nelumbo nucifera HOM05D004723 ORTHO05D006176 9.1e-160 568.2 619 59.3
Lj4A224T28 Lonicera japonica HOM05D004723 ORTHO05D006176 4.5e-159 565.8 735 56.3
Thecc.08G139800 Theobroma cacao HOM05D004723 ORTHO05D006176 4.5e-159 565.8 637 63.9
ClCG05G000690 Citrullus lanatus HOM05D004723 ORTHO05D006176 1.4e-157 560.8 651 57.1
Gohir.A05G376600 Gossypium hirsutum HOM05D004723 ORTHO05D006176 1.9e-157 560.5 643 61.6
Duzib147G1420 Durio zibethinus HOM05D004723 ORTHO05D006176 7.9e-156 555.1 628 60.4
Cc07_g11220 Coffea canephora HOM05D004723 ORTHO05D006176 3.0e-155 553.1 654 57.5
CSS0036730 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 6.7e-155 552.0 651 58.5
Hund14070 Selenicereus undatus HOM05D004723 ORTHO05D006176 1.1e-154 551.2 637 63.9
MELO3C006009.2 Cucumis melo HOM05D004723 ORTHO05D006176 3.3e-154 549.7 657 57.7
CSS0012813 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 4.8e-153 545.8 668 59.9
Nitab4.5_0006899g0060 Nicotiana tabacum HOM05D004723 ORTHO05D006176 4.8e-153 545.8 676 59.5
CsaV3_3G007910 Cucumis sativus L. HOM05D004723 ORTHO05D006176 8.2e-153 545.0 659 61.0
TAR628G1348 Trochodendron aralioides HOM05D004723 ORTHO05D006176 1.8e-152 543.9 654 61.9
PGSC0003DMG400003588 Solanum tuberosum HOM05D004723 ORTHO05D006176 3.1e-152 543.1 664 58.9
Ciclev10025027m.g Citrus clementina HOM05D004723 ORTHO05D006176 1.2e-151 541.2 622 65.8
PGR119G2074 Punica granatum HOM05D004723 ORTHO05D006176 3.2e-149 533.1 658 59.7
arahy.Tifrunner.gnm1.ann1.DG5MW5 Arachis hypogaea HOM05D004723 ORTHO05D006176 7.2e-149 531.9 620 59.5
Solyc02g083470.3 Solanum lycopersicum HOM05D004723 ORTHO05D006176 3.6e-148 529.6 676 57.7
Nitab4.5_0001789g0050 Nicotiana tabacum HOM05D004723 ORTHO05D006176 8.0e-148 528.5 674 60.8
Sopen02g028260 Solanum pennellii HOM05D004723 ORTHO05D006176 4.0e-147 526.2 653 61.7
Cpa.g.sc6.304 Carica papaya HOM05D004723 ORTHO05D006176 5.2e-147 525.8 645 60.9
DCAR_024713 Daucus carota HOM05D004723 ORTHO05D006176 5.2e-147 525.8 649 56.4
ECA232G2222 Erigeron canadensis HOM05D004723 ORTHO05D006176 5.2e-147 525.8 625 56.2
Lalb_Chr16g0391491 Lupinus albus HOM05D004723 ORTHO05D006176 2.6e-146 523.5 634 62.0
Peaxi162Scf00198g00136 Petunia axillaris HOM05D004723 ORTHO05D006176 1.3e-145 521.2 619 63.2
arahy.Tifrunner.gnm1.ann1.7VD04T Arachis hypogaea HOM05D004723 ORTHO05D006176 4.8e-145 519.2 619 60.6
HanXRQChr09g0257321 Helianthus annuus HOM05D004723 ORTHO05D006176 6.3e-145 518.8 670 55.2
FAN23G0842 Fragaria x ananassa HOM05D004723 ORTHO05D006176 5.3e-144 515.8 653 62.3
CANSAT25G3056 Cannabis sativa HOM05D004723 ORTHO05D006176 7.0e-144 515.4 649 62.6
Actinidia35669 Actinidia chinensis HOM05D004723 ORTHO05D006176 7.7e-143 511.9 669 55.3
MSTRG.10980 Avicennia marina HOM05D004723 ORTHO05D006176 1.0e-142 511.5 653 52.5
EL10Ac6g15170 Beta vulgaris HOM05D004723 ORTHO05D006176 3.2e-141 506.5 651 59.0
CAN.G890.41 Capsicum annuum HOM05D004723 ORTHO05D006176 5.5e-141 505.8 481 60.5
VMungo0251G3240 Vigna mungo HOM05D004723 ORTHO05D006176 1.0e-139 501.5 639 53.2
Rhsim08G0030800 Rhododendron simsii HOM05D004723 ORTHO05D006176 5.2e-139 499.2 664 52.9
Gohir.1Z049326 Gossypium hirsutum HOM05D004723 ORTHO05D006176 2.8e-137 493.4 628 57.3
Lj4g0028127 Lotus japonicus HOM05D004723 ORTHO05D006176 3.7e-137 493.0 615 58.2
Phvul.003G266400 Phaseolus vulgaris HOM05D004723 ORTHO05D006176 8.3e-137 491.9 639 56.3
Psat7g090000 Pisum sativum HOM05D004723 ORTHO05D006176 1.4e-136 491.1 634 54.9
Aqoxy6G02087 Aquilegia oxysepala HOM05D004723 ORTHO05D006176 1.5e-133 481.1 704 54.0
Lsat_1_v5_gn_4_144101 Lactuca sativa HOM05D004723 ORTHO05D006176 1.9e-133 480.7 685 53.7
Ca_18264_v3 Cicer arietinum L. HOM05D004723 ORTHO05D006176 6.1e-132 475.7 618 56.1
PSO675G8954 Papaver somniferum HOM05D004723 ORTHO05D006176 6.8e-131 472.2 641 53.4
Glyma.16G122800 Glycine max HOM05D004723 ORTHO05D006176 1.2e-130 471.5 644 51.6
PSO541G1155 Papaver somniferum HOM05D004723 ORTHO05D006176 7.5e-130 468.8 653 54.5
AL3G11100 Arabidopsis lyrata HOM05D004723 ORTHO05D006176 1.3e-129 468.0 662 53.8
Glyma.02G045200 Glycine max HOM05D004723 ORTHO05D006176 2.2e-129 467.2 707 49.5
Migut.F01827 Erythranthe guttata HOM05D004723 ORTHO05D006176 8.3e-129 465.3 469 59.3
AT3G01160 Arabidopsis thaliana HOM05D004723 ORTHO05D006176 5.4e-128 462.6 648 52.9
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 2.9e-126 456.8 655 51.9
AUR62003701 Chenopodium quinoa HOM05D004723 ORTHO05D006176 8.6e-126 455.3 656 50.9
Medtr4g096820 Medicago truncatula HOM05D004723 ORTHO05D006176 7.3e-125 452.2 653 51.6
Sp3g00960 Schrenkiella parvula HOM05D004723 ORTHO05D006176 2.6e-122 443.7 649 54.9
MD15G1238700 Malus domestica HOM05D004723 ORTHO05D006176 5.7e-122 442.6 331 90.3
Oeu005338.2 Olea europaea HOM05D004723 ORTHO05D006176 8.3e-121 438.7 692 52.7
Aa31LG5G12460 Aethionema arabicum HOM05D004723 ORTHO05D006176 2.4e-120 437.2 686 56.0
vmacro18436 Vaccinium macrocarpon HOM05D004723 ORTHO05D006176 7.0e-120 435.6 669 49.3
SGA_v2.0_scaffold111G31425 Striga asiatica HOM05D004723 ORTHO05D006176 2.7e-119 433.7 690 51.4
Carub.0003s0100 Capsella rubella HOM05D004723 ORTHO05D006176 2.8e-116 423.7 666 59.2
AUR62018009 Chenopodium quinoa HOM05D004723 ORTHO05D006176 1.4e-115 421.4 472 54.4
Thhalv10020182m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 5.2e-115 419.5 653 53.0
Ah.01g003790 Amaranthus hybridus HOM05D004723 ORTHO05D006176 1.5e-114 417.9 636 52.5
BraA05t23177Z Brassica rapa HOM05D004723 ORTHO05D006176 1.7e-113 414.5 666 53.9
A05p44800 Brassica napus HOM05D004723 ORTHO05D006176 1.1e-112 411.8 666 53.0
ATR0665G361 Amborella trichopoda HOM05D004723 ORTHO05D006176 1.2e-111 408.3 503 55.9
CARHR075890 Cardamine hirsuta HOM05D004723 ORTHO05D006176 1.9e-109 401.0 655 55.4
BcaC05g30489 Brassica carinata HOM05D004723 ORTHO05D006176 1.2e-108 398.3 660 55.6
Medtr4g073330 Medicago truncatula HOM05D004723 ORTHO05D006176 3.1e-107 393.7 630 48.7
BcaC05g30387 Brassica carinata HOM05D004723 ORTHO05D006176 5.2e-107 392.9 658 51.2
SEGI_08029 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 2.0e-106 391.0 484 52.7
C09p75390 Brassica napus HOM05D004723 ORTHO05D006176 1.3e-105 388.3 653 51.9
SHI00027 Sapria himalayana HOM05D004723 ORTHO05D006176 1.7e-105 387.9 642 44.2
Dinv40130 Davidia involucrata HOM05D004723 ORTHO05D006176 2.4e-104 384.0 342 66.4
BolC5t35121H Brassica oleracea HOM05D004723 ORTHO05D006176 3.5e-103 380.2 668 50.6
TPR.G4863 Trifolium pratense HOM05D004723 ORTHO05D006176 6.0e-103 379.4 465 55.7
AagrBONN_evm.TU.Sc2ySwM_117.2822 Anthoceros agrestis HOM05D004723 ORTHO05D006176 6.6e-102 375.9 670 44.0
Gohir.1Z049627 Gossypium hirsutum HOM05D004723 ORTHO05D006176 1.5e-101 374.8 363 66.7
Os07g0531700 Oryza sativa ssp. japonica HOM05D004723 ORTHO05D006176 1.7e-97 361.3 628 53.7
AagrBONN_evm.TU.Sc2ySwM_368.2747 Anthoceros agrestis HOM05D004723 ORTHO05D006176 1.3e-94 351.7 658 44.4
Zm00001eb323180 Zea mays HOM05D004723 ORTHO05D006176 4.7e-92 343.2 659 46.0
BcaC01g04506 Brassica carinata HOM05D004723 ORTHO05D006176 2.4e-91 340.9 658 49.1
SMO232G0062 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 1.3e-89 335.1 631 40.3
MD15G1238600 Malus domestica HOM05D004723 ORTHO05D006176 1.0e-86 325.5 296 73.3
CDE05G0976 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 2.3e-86 324.3 381 59.1
SMO239G0207 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 1.6e-84 318.2 615 38.9
Thecc.01G155000 Theobroma cacao HOM05D004723 ORTHO05D006176 1.8e-83 314.7 319 65.8
Pp3c17_7210 Physcomitrium patens HOM05D004723 ORTHO05D006176 1.2e-79 302.0 504 43.8
Mapoly0061s0018 Marchantia polymorpha HOM05D004723 ORTHO05D006176 9.3e-64 249.2 812 29.8
TAR628G1016 Trochodendron aralioides HOM05D004723 ORTHO05D005421 7.9e-63 246.1 212 62.7
Rhsim08G0030900 Rhododendron simsii HOM05D004723 ORTHO05D006176 5.9e-58 229.9 437 41.6
C03p39900 Brassica napus HOM05D004723 ORTHO05D006176 9.4e-56 222.6 199 57.8
Gohir.D04G039432 Gossypium hirsutum HOM05D004723 ORTHO05D006176 1.1e-53 215.7 263 54.8
CBR_g41392 Chara braunii HOM05D004723 ORTHO05D006176 3.3e-53 214.2 650 38.0
HPP92_019125 Vanilla planifolia HOM05D004723 ORTHO05D006176 4.3e-53 213.8 204 53.4
PRCOL_00004947 Prasinoderma coloniale HOM05D004723 ORTHO05D006176 5.0e-49 200.3 586 35.3
TPR.G3121 Trifolium pratense HOM05D004723 ORTHO05D006176 1.3e-44 185.7 220 49.1
COL.COLO4_33606 Corchorus olitorius HOM05D004723 ORTHO05D006176 2.8e-44 184.5 192 67.7
MCO13G085 Micromonas commoda HOM05D004723 ORTHO05D006176 2.8e-44 184.5 424 36.8
Cre10.g452500 Chlamydomonas reinhardtii HOM05D004723 ORTHO05D006176 6.3e-44 183.3 441 39.5
CDE05G0343 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 6.7e-38 163.3 199 57.8
COL.COLO4_34179 Corchorus olitorius HOM05D004723 ORTHO05D006176 7.4e-37 159.8 479 30.1
HPP92_019124 Vanilla planifolia HOM05D004723 ORTHO05D006176 3.5e-34 151.0 192 52.6
GSVIVG01005594001 Vitis vinifera HOM05D004723 ORTHO05D006176 4.5e-26 124.0 172 57.0
BolC3t16253H Brassica oleracea HOM05D004723 ORTHO05D006176 1.0e-25 122.9 112 56.2
TAR628G0893 Trochodendron aralioides HOM05D004723 ORTHO05D006176 1.1e-24 119.4 97 68.0
Medtr3g107330 Medicago truncatula HOM05D004723 ORTHO05D006176 1.6e-23 115.5 99 57.6
Medtr3g107350 Medicago truncatula HOM05D004723 ORTHO05D006176 1.0e-22 112.8 196 48.0
Dinv40131 Davidia involucrata HOM05D004723 ORTHO05D006176 1.2e-21 109.4 81 71.6
GSVIVG01005388001 Vitis vinifera HOM05D004723 ORTHO05D006176 1.5e-21 109.0 70 74.3
TPR.G330 Trifolium pratense HOM05D004723 ORTHO05D006176 8.3e-20 103.2 107 48.6
TPR.G29970 Trifolium pratense HOM05D004723 ORTHO05D006176 2.7e-18 98.2 82 59.8
TPR.G36124 Trifolium pratense HOM05D004723 ORTHO05D006176 2.7e-18 98.2 78 59.0
Lsat_1_v5_gn_5_164041 Lactuca sativa HOM05D004723 ORTHO05D006176 1.0e-17 96.3 202 35.6
AagrBONN_evm.TU.Sc2ySwM_117.2819 Anthoceros agrestis HOM05D004723 ORTHO05D006176 1.3e-17 95.9 333 30.0
Oeu046870.1 Olea europaea HOM05D004723 ORTHO05D006176 1.3e-17 95.9 87 60.9
THA.LOC104821168 Tarenaya hassleriana HOM05D004723 ORTHO05D006176 2.9e-17 94.7 71 70.4
TPR.G21433 Trifolium pratense HOM05D004723 ORTHO05D006176 1.9e-16 92.0 196 35.7
Thecc.01G154900 Theobroma cacao HOM05D004723 ORTHO05D006176 4.2e-16 90.9 77 63.6
Thhalv10017085m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 8.0e-15 86.7 166 39.8
SEGI_25425 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 8.3e-12 76.6 74 56.8
COL.COLO4_33622 Corchorus olitorius HOM05D004723 ORTHO05D006176 3.1e-11 74.7 83 50.6
Actinidia28727 Actinidia chinensis HOM05D004723 ORTHO05D006176 2.0e-10 72.0 103 48.5
BolC3t16252H Brassica oleracea HOM05D004723 ORTHO05D006176 3.5e-10 71.2 58 65.5
FAN17G1680 Fragaria x ananassa HOM05D032679 ORTHO05D022627 3.5e-10 71.2 72 50.0
FAN24G3340 Fragaria x ananassa HOM05D032679 ORTHO05D022627 3.5e-10 71.2 72 50.0
FAN18G3965 Fragaria x ananassa HOM05D032679 ORTHO05D022627 1.7e-09 68.9 72 48.6
C03p39770 Brassica napus HOM05D059891 ORTHO05D040930 2.5e-08 65.1 72 48.6
FAN22G1655 Fragaria x ananassa HOM05D002244 ORTHO05D035452 1.2e-07 62.8 60 48.3
FAN03G2005 Fragaria x ananassa HOM05D004723 ORTHO05D002269 2.1e-07 62.0 60 48.3
C03p39890 Brassica napus HOM05D004723 ORTHO05D019910 1.4e-06 59.3 71 53.5
BolC3t16251H Brassica oleracea HOM05D004723 ORTHO05D019910 3.1e-06 58.2 71 52.1
Eucgr.C02078 Eucalyptus grandis HOM05D000238 ORTHO05D010253 5.2e-06 57.4 32 71.9


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