Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1094800 Malus domestica HOM05D000043 ORTHO05D048691 7.5e-28 126.3 58 100.0
Prupe.7G196200 Prunus persica HOM05D000043 ORTHO05D002208 9.2e-18 92.8 53 77.4
CiPaw.03G204100 Carya illinoinensis HOM05D000043 ORTHO05D002208 1.6e-14 82.0 51 68.6
FvH4_1g08950 Fragaria vesca HOM05D000043 ORTHO05D002208 8.1e-14 79.7 52 65.4
FAN19G1592 Fragaria x ananassa HOM05D000043 ORTHO05D002208 8.1e-14 79.7 52 65.4
FAN23G1302 Fragaria x ananassa HOM05D000043 ORTHO05D002208 8.1e-14 79.7 52 65.4
Actinidia39647 Actinidia chinensis HOM05D000043 ORTHO05D002208 2.3e-13 78.2 46 69.6
FAN28G0763 Fragaria x ananassa HOM05D000043 ORTHO05D002208 2.3e-13 78.2 52 67.3
Cfa002971 Carpinus fangiana HOM05D000043 ORTHO05D002208 2.6e-12 74.7 52 61.5
GSVIVG01015054001 Vitis vinifera HOM05D000043 ORTHO05D002208 3.4e-12 74.3 46 69.6
Haze_26031 Corylus avellana HOM05D000043 ORTHO05D002208 2.2e-11 71.6 50 62.0
QL11p001120 Quercus lobata HOM05D000043 ORTHO05D002208 2.9e-11 71.2 53 56.6
CiPaw.04G142300 Carya illinoinensis HOM05D000043 ORTHO05D002208 4.9e-11 70.5 52 57.7
vmacro17126 Vaccinium macrocarpon HOM05D000043 ORTHO05D002208 4.9e-11 70.5 53 58.5
TWI34G1646 Tripterygium wilfordii HOM05D000043 ORTHO05D002208 6.4e-11 70.1 46 63.0
Dinv42409 Davidia involucrata HOM05D000043 ORTHO05D002208 8.3e-11 69.7 52 61.5
RcHm_v2.0_Chr2g0095401 Rosa chinensis HOM05D000043 ORTHO05D002208 8.3e-11 69.7 54 59.3
TAR624G0318 Trochodendron aralioides HOM05D000043 ORTHO05D002208 8.3e-11 69.7 45 64.4
ClCG11G001370 Citrullus lanatus HOM05D000043 ORTHO05D002208 1.9e-10 68.6 51 60.8
Rhsim05G0005600 Rhododendron simsii HOM05D000043 ORTHO05D002208 1.9e-10 68.6 52 57.7
Atru.chr7.1726 Acer truncatum HOM05D000043 ORTHO05D002208 2.4e-10 68.2 46 60.9
RcHm_v2.0_Chr7g0215131 Rosa chinensis HOM05D000043 ORTHO05D048691 2.4e-10 68.2 48 64.6
CsaV3_2G001090 Cucumis sativus L. HOM05D000043 ORTHO05D002208 3.2e-10 67.8 51 60.8
Nn6g35522 Nelumbo nucifera HOM05D000043 ORTHO05D002208 4.1e-10 67.4 48 60.4
TPR.G12640 Trifolium pratense HOM05D000043 ORTHO05D002208 5.4e-10 67.0 51 56.9
Lj4g0020349 Lotus japonicus HOM05D000043 ORTHO05D002208 7.1e-10 66.6 51 58.8
Psat7g057720 Pisum sativum HOM05D000043 ORTHO05D002208 7.1e-10 66.6 51 54.9
Aqoxy7G01019 Aquilegia oxysepala HOM05D000043 ORTHO05D002208 9.2e-10 66.2 46 58.7
PGR044G1725 Punica granatum HOM05D000043 ORTHO05D002208 1.2e-09 65.9 44 61.4
Medtr4g125060 Medicago truncatula HOM05D000043 ORTHO05D002208 2.1e-09 65.1 51 54.9
Nn6g35688 Nelumbo nucifera HOM05D000043 ORTHO05D002208 2.1e-09 65.1 48 56.2
Ciclev10007982m.g Citrus clementina HOM05D000043 ORTHO05D002208 3.5e-09 64.3 54 53.7
MELO3C004660.2 Cucumis melo HOM05D000043 ORTHO05D002208 3.5e-09 64.3 51 56.9
CSS0023260 Camellia sinensis var. sinensis HOM05D000043 ORTHO05D015010 7.8e-09 63.2 52 50.0
Lalb_Chr13g0299381 Lupinus albus HOM05D000043 ORTHO05D002208 7.8e-09 63.2 54 53.7
CSS0007531 Camellia sinensis var. sinensis HOM05D000043 ORTHO05D015010 1.0e-08 62.8 52 50.0
CANSAT11G1814 Cannabis sativa HOM05D000043 ORTHO05D015010 1.3e-08 62.4 50 60.0
Lsat_1_v5_gn_5_139981 Lactuca sativa HOM05D000043 ORTHO05D002208 2.3e-08 61.6 53 52.8
Sc18g0002670 Simmondsia chinensis HOM05D000043 ORTHO05D002208 5.1e-08 60.5 54 50.0
MBI13_g00706_MAGBIO Magnolia biondii HOM05D000043 ORTHO05D002208 6.6e-08 60.1 44 59.1
Sed0025353 Sechium edule HOM05D000043 ORTHO05D002208 6.6e-08 60.1 51 54.9
CSS0039485 Camellia sinensis var. sinensis HOM05D000043 ORTHO05D002208 1.1e-07 59.3 43 51.2
AUR62028273 Chenopodium quinoa HOM05D000043 ORTHO05D002208 1.1e-07 59.3 53 47.2
arahy.Tifrunner.gnm1.ann1.0513A0 Arachis hypogaea HOM05D000043 ORTHO05D002208 1.5e-07 58.9 53 49.1
arahy.Tifrunner.gnm1.ann1.RPGZ11 Arachis hypogaea HOM05D000043 ORTHO05D002208 1.9e-07 58.5 52 50.0
AUR62025271 Chenopodium quinoa HOM05D000043 ORTHO05D002208 1.9e-07 58.5 52 48.1
EL10Ac8g19039 Beta vulgaris HOM05D000043 ORTHO05D002208 3.3e-07 57.8 53 47.2
Lalb_Chr11g0074181 Lupinus albus HOM05D000043 ORTHO05D002208 5.6e-07 57.0 48 58.3
Manes.16G094000 Manihot esculenta HOM05D000043 ORTHO05D002208 9.5e-07 56.2 48 52.1
DCAR_011939 Daucus carota HOM05D000043 ORTHO05D002208 2.1e-06 55.1 46 50.0
Potri.006G140300 Populus trichocarpa HOM05D000043 ORTHO05D002208 2.1e-06 55.1 51 45.1
VMungo1309G1143 Vigna mungo HOM05D000043 ORTHO05D002208 2.1e-06 55.1 52 44.2
Glyma.17G048200 Glycine max HOM05D000043 ORTHO05D002208 2.8e-06 54.7 44 52.3
Sabra06G0109500 Salix brachista HOM05D000043 ORTHO05D002208 3.6e-06 54.3 51 43.1
Glyma.13G111400 Glycine max HOM05D000043 ORTHO05D002208 6.2e-06 53.5 44 52.3
Lalb_Chr07g0181241 Lupinus albus HOM05D000043 ORTHO05D002208 6.2e-06 53.5 46 47.8
Nn6g35521 Nelumbo nucifera HOM05D000043 ORTHO05D002208 8.1e-06 53.1 43 55.8
Oeu007420.1 Olea europaea HOM05D000043 ORTHO05D002208 8.1e-06 53.1 52 48.1
Thecc.09G074700 Theobroma cacao HOM05D000043 ORTHO05D002208 8.1e-06 53.1 55 47.3


User provided reference genes

Program Settings