Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 1.3e-282 975.7 497 100.0
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 2.2e-232 808.9 497 82.9
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 1.9e-204 716.1 503 73.2
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 4.0e-194 681.8 503 70.2
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 3.3e-188 662.1 488 69.7
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.2e-187 660.2 488 69.5
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 2.3e-181 639.4 501 64.5
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 6.8e-178 627.9 501 65.5
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 5.4e-175 618.2 501 62.9
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 2.8e-171 605.9 502 62.9
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 5.4e-167 591.7 505 60.2
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 7.1e-167 591.3 502 60.0
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 3.9e-165 585.5 502 60.0
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 9.5e-164 580.9 504 60.7
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 3.1e-162 575.9 501 60.1
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 4.9e-160 568.5 508 57.9
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 2.1e-158 563.1 505 59.0
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 1.2e-155 553.9 504 57.7
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 1.2e-155 553.9 511 58.5
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 6.2e-155 551.6 506 57.1
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 6.2e-155 551.6 506 57.1
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 1.1e-154 550.8 509 57.4
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 4.0e-154 548.9 504 58.3
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 5.2e-154 548.5 501 57.7
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 6.8e-154 548.1 419 67.8
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 8.9e-154 547.7 415 68.0
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 3.8e-152 542.3 459 66.2
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 4.9e-152 542.0 498 57.6
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 6.0e-150 535.0 503 58.1
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 1.0e-149 534.3 504 56.5
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 1.5e-145 520.4 502 53.8
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 1.5e-140 503.8 502 53.4
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 4.3e-140 502.3 520 53.3
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 1.8e-138 496.9 502 53.6
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 4.0e-138 495.7 420 59.0
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 1.7e-136 490.3 507 53.3
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 3.8e-136 489.2 509 53.2
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 1.4e-135 487.3 504 53.2
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 2.4e-135 486.5 428 58.4
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 1.6e-134 483.8 411 60.1
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 7.9e-134 481.5 508 52.6
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 1.0e-133 481.1 517 49.9
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 5.1e-133 478.8 509 51.7
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 5.1e-133 478.8 503 52.9
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 4.3e-132 475.7 492 52.2
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 1.3e-131 474.2 504 49.4
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 3.7e-131 472.6 508 51.2
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 6.2e-131 471.9 510 50.6
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 3.1e-130 469.5 508 51.2
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 3.1e-130 469.5 511 51.3
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 4.0e-130 469.2 510 49.8
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 9.0e-130 468.0 511 51.1
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.5e-129 467.2 310 75.2
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 1.5e-129 467.2 499 51.9
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 2.0e-129 466.8 511 50.5
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 3.4e-129 466.1 509 51.3
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 3.4e-129 466.1 505 50.7
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 1.7e-128 463.8 421 57.0
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 3.8e-128 462.6 513 49.5
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 4.2e-127 459.1 509 48.3
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 5.5e-127 458.8 502 50.2
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 1.6e-126 457.2 503 49.1
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 3.5e-126 456.1 416 58.2
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 1.1e-122 444.5 506 49.4
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 9.3e-119 431.4 459 49.7
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 3.3e-116 422.9 524 46.6
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 7.4e-116 421.8 511 46.2
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 1.6e-115 420.6 425 53.9
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 4.5e-113 412.5 511 49.7
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 2.8e-107 393.3 415 51.3
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 3.8e-104 382.9 418 50.2
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 1.8e-98 364.0 362 55.0
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 1.2e-89 334.7 513 41.3
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 1.4e-82 311.2 242 62.4
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 2.0e-76 290.8 559 35.6
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 2.9e-72 276.9 562 36.1
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 8.6e-72 275.4 503 36.2
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 2.6e-68 263.8 499 34.7
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 3.2e-50 203.8 166 65.1
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 1.3e-35 155.2 117 65.0
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 2.9e-35 154.1 478 26.4
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 1.5e-28 131.7 442 27.8
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 2.8e-14 84.3 249 30.9
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 2.4e-13 81.3 498 23.7
SMO302G0010 Selaginella moellendorffii HOM05D001821 ORTHO05D001778 5.7e-07 60.1 120 34.2


User provided reference genes

Program Settings