Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1065100 Malus domestica HOM05D000581 ORTHO05D000412 7.5e-33 143.3 73 100.0
MD15G1195900 Malus domestica HOM05D000581 ORTHO05D000412 9.5e-20 99.8 111 54.1
COL.COLO4_34753 Corchorus olitorius HOM05D000581 ORTHO05D000412 2.3e-10 68.6 47 68.1
Gorai.010G218200 Gossypium raimondii HOM05D000581 ORTHO05D000412 2.6e-09 65.1 61 54.1
Thecc.09G101500 Theobroma cacao HOM05D000581 ORTHO05D000412 3.4e-09 64.7 47 63.8
FAN23G1499 Fragaria x ananassa HOM05D000581 ORTHO05D000412 4.4e-09 64.3 90 37.8
Gohir.A06G176600 Gossypium hirsutum HOM05D000581 ORTHO05D000412 4.4e-09 64.3 68 51.5
Prupe.7G220400 Prunus persica HOM05D000581 ORTHO05D000412 5.8e-09 63.9 91 41.8
Thecc.09G101300 Theobroma cacao HOM05D000581 ORTHO05D000412 7.5e-09 63.5 47 63.8
Gohir.A06G176500 Gossypium hirsutum HOM05D000581 ORTHO05D000412 3.7e-08 61.2 68 50.0
Lalb_Chr25g0280161 Lupinus albus HOM05D000581 ORTHO05D000412 3.7e-08 61.2 69 43.5
Gohir.A06G176400 Gossypium hirsutum HOM05D000581 ORTHO05D000412 6.4e-08 60.5 47 59.6
Gohir.D06G185950 Gossypium hirsutum HOM05D000581 ORTHO05D000412 6.4e-08 60.5 47 59.6
Gorai.010G218100 Gossypium raimondii HOM05D000581 ORTHO05D000412 6.4e-08 60.5 47 59.6
Ca_23261_v3 Cicer arietinum L. HOM05D000581 ORTHO05D000412 8.3e-08 60.1 79 41.8
Duzib235G0680 Durio zibethinus HOM05D000581 ORTHO05D000412 8.3e-08 60.1 59 50.8
Psat5g296160 Pisum sativum HOM05D000581 ORTHO05D000412 8.3e-08 60.1 47 57.4
Hund07599 Selenicereus undatus HOM05D000581 ORTHO05D000412 8.3e-08 60.1 59 52.5
Thecc.06G099900 Theobroma cacao HOM05D000581 ORTHO05D000412 8.3e-08 60.1 59 50.8
TWI12G0066 Tripterygium wilfordii HOM05D000581 ORTHO05D000412 1.1e-07 59.7 59 47.5
Atru.chr1.3522 Acer truncatum HOM05D000581 ORTHO05D000412 1.4e-07 59.3 59 49.2
arahy.Tifrunner.gnm1.ann1.5X1YG2 Arachis hypogaea HOM05D000581 ORTHO05D000412 1.4e-07 59.3 69 43.5
arahy.Tifrunner.gnm1.ann1.R40G9H Arachis hypogaea HOM05D000581 ORTHO05D000412 1.4e-07 59.3 69 43.5
AUR62022204 Chenopodium quinoa HOM05D000581 ORTHO05D000412 1.4e-07 59.3 59 50.8
AUR62031913 Chenopodium quinoa HOM05D000581 ORTHO05D000412 1.4e-07 59.3 59 50.8
Glyma.08G201100 Glycine max HOM05D000581 ORTHO05D000412 1.4e-07 59.3 47 57.4
Phvul.010G145400 Phaseolus vulgaris HOM05D000581 ORTHO05D000412 1.4e-07 59.3 47 57.4
Ca_01164_v3 Cicer arietinum L. HOM05D000581 ORTHO05D000412 1.9e-07 58.9 59 47.5
Hma1.2p1_0430F.1_g151400 Hydrangea macrophylla HOM05D000581 ORTHO05D000412 1.9e-07 58.9 59 49.2
Psat5g295840 Pisum sativum HOM05D000581 ORTHO05D000412 1.9e-07 58.9 91 36.3
VMungo0331G1806 Vigna mungo HOM05D000581 ORTHO05D000412 1.9e-07 58.9 47 55.3
Glyma.07G015600 Glycine max HOM05D000581 ORTHO05D000412 2.4e-07 58.5 47 57.4
Gohir.A10G065400 Gossypium hirsutum HOM05D000581 ORTHO05D000412 2.4e-07 58.5 59 50.8
Gohir.D10G066900 Gossypium hirsutum HOM05D000581 ORTHO05D000412 2.4e-07 58.5 59 50.8
Gorai.011G071100 Gossypium raimondii HOM05D000581 ORTHO05D000412 2.4e-07 58.5 59 50.8
MD09G1203100 Malus domestica HOM05D000581 ORTHO05D000412 2.4e-07 58.5 47 61.7
Hund00725 Selenicereus undatus HOM05D000581 ORTHO05D000412 3.2e-07 58.2 59 49.2
CANSAT56G1346 Cannabis sativa HOM05D000581 ORTHO05D000412 4.1e-07 57.8 45 57.8
Cc04_g02570 Coffea canephora HOM05D000581 ORTHO05D000412 4.1e-07 57.8 47 59.6
COL.COLO4_30511 Corchorus olitorius HOM05D000581 ORTHO05D000412 4.1e-07 57.8 47 57.4
RcHm_v2.0_Chr2g0140511 Rosa chinensis HOM05D000581 ORTHO05D000412 4.1e-07 57.8 47 59.6
GSVIVG01035294001 Vitis vinifera HOM05D000581 ORTHO05D000412 4.1e-07 57.8 71 45.1
CSS0047019 Camellia sinensis var. sinensis HOM05D000581 ORTHO05D000412 5.4e-07 57.4 59 47.5
Duzib160G0067 Durio zibethinus HOM05D000581 ORTHO05D000412 5.4e-07 57.4 47 55.3
QL05p020124 Quercus lobata HOM05D000581 ORTHO05D000412 5.4e-07 57.4 47 55.3
Cfa003650 Carpinus fangiana HOM05D000581 ORTHO05D000412 7.0e-07 57.0 47 55.3
Haze_15846 Corylus avellana HOM05D000581 ORTHO05D000412 7.0e-07 57.0 47 55.3
Hma1.2p1_0012F.1_g007340 Hydrangea macrophylla HOM05D000581 ORTHO05D000412 7.0e-07 57.0 87 36.8
Ah.01g005810 Amaranthus hybridus HOM05D000581 ORTHO05D000412 9.2e-07 56.6 47 57.4
ClCG09G000190 Citrullus lanatus HOM05D000581 ORTHO05D000412 9.2e-07 56.6 47 57.4
CsaV3_7G035290 Cucumis sativus L. HOM05D000581 ORTHO05D000412 9.2e-07 56.6 47 57.4
Duzib168G0687 Durio zibethinus HOM05D000581 ORTHO05D000412 9.2e-07 56.6 35 71.4
Duzib192G0371 Durio zibethinus HOM05D000581 ORTHO05D000412 9.2e-07 56.6 59 47.5
Medtr2g100880 Medicago truncatula HOM05D000581 ORTHO05D000412 9.2e-07 56.6 47 55.3
Medtr2g100900 Medicago truncatula HOM05D000581 ORTHO05D000412 9.2e-07 56.6 47 55.3
TPR.G6590 Trifolium pratense HOM05D000581 ORTHO05D000412 9.2e-07 56.6 47 55.3
GSVIVG01016986001 Vitis vinifera HOM05D000581 ORTHO05D000412 9.2e-07 56.6 59 49.2
Ciclev10030222m.g Citrus clementina HOM05D000581 ORTHO05D000412 1.2e-06 56.2 43 55.8
COL.COLO4_20997 Corchorus olitorius HOM05D000581 ORTHO05D000412 1.2e-06 56.2 54 48.1
Gohir.A05G129200 Gossypium hirsutum HOM05D000581 ORTHO05D000412 1.2e-06 56.2 59 44.1
Lj3g0019320 Lotus japonicus HOM05D000581 ORTHO05D000412 1.2e-06 56.2 47 55.3
Lalb_Chr24g0396161 Lupinus albus HOM05D000581 ORTHO05D000412 1.2e-06 56.2 47 57.4
Prupe.3G059200 Prunus persica HOM05D000581 ORTHO05D000412 1.2e-06 56.2 47 55.3
TAR624G0712 Trochodendron aralioides HOM05D000581 ORTHO05D000412 1.2e-06 56.2 47 57.4
EL10Ac9g21208 Beta vulgaris HOM05D000581 ORTHO05D000412 1.6e-06 55.8 47 55.3
DCAR_004461 Daucus carota HOM05D000581 ORTHO05D000412 1.6e-06 55.8 62 45.2
Eucgr.F03077 Eucalyptus grandis HOM05D000581 ORTHO05D000412 1.6e-06 55.8 48 62.5
Gohir.A06G091600 Gossypium hirsutum HOM05D000581 ORTHO05D000412 1.6e-06 55.8 47 53.2
Gohir.D06G090900 Gossypium hirsutum HOM05D000581 ORTHO05D000412 1.6e-06 55.8 47 53.2
Potri.001G189900 Populus trichocarpa HOM05D000581 ORTHO05D000412 1.6e-06 55.8 59 47.5
Sed0018850 Sechium edule HOM05D000581 ORTHO05D000412 1.6e-06 55.8 47 55.3
Sc15g0001900 Simmondsia chinensis HOM05D000581 ORTHO05D000412 1.6e-06 55.8 56 48.2
Duzib187G0513 Durio zibethinus HOM05D000581 ORTHO05D000412 2.0e-06 55.5 59 44.1
FvH4_1g06050 Fragaria vesca HOM05D000581 ORTHO05D000412 2.0e-06 55.5 46 52.2
FAN19G1961 Fragaria x ananassa HOM05D000581 ORTHO05D000412 2.0e-06 55.5 46 52.2
FAN26G2331 Fragaria x ananassa HOM05D000581 ORTHO05D000412 2.0e-06 55.5 46 52.2
FAN26G3261 Fragaria x ananassa HOM05D000581 ORTHO05D000412 2.0e-06 55.5 46 52.2
Glyma.13G354700 Glycine max HOM05D000581 ORTHO05D000412 2.0e-06 55.5 47 55.3
FvH4_6g32380 Fragaria vesca HOM05D000581 ORTHO05D000412 2.7e-06 55.1 47 55.3
Lj3g0013246 Lotus japonicus HOM05D000581 ORTHO05D000412 2.7e-06 55.1 47 53.2
CsaV3_3G023600 Cucumis sativus L. HOM05D000581 ORTHO05D000412 3.5e-06 54.7 47 55.3
Dinv27922 Davidia involucrata HOM05D000581 ORTHO05D000412 3.5e-06 54.7 59 44.1
Glyma.15G019500 Glycine max HOM05D000581 ORTHO05D000412 3.5e-06 54.7 47 55.3
Potri.018G046800 Populus trichocarpa HOM05D000581 ORTHO05D000412 3.5e-06 54.7 71 39.4
Sed0002879 Sechium edule HOM05D000581 ORTHO05D000412 3.5e-06 54.7 47 55.3
CiPaw.01G231500 Carya illinoinensis HOM05D000581 ORTHO05D000412 4.6e-06 54.3 47 51.1
CiPaw.01G231600 Carya illinoinensis HOM05D000581 ORTHO05D000412 4.6e-06 54.3 47 51.1
Lsat_1_v5_gn_4_97481 Lactuca sativa HOM05D000581 ORTHO05D000412 4.6e-06 54.3 47 48.9
QL05p020091 Quercus lobata HOM05D000581 ORTHO05D000412 4.6e-06 54.3 47 55.3
Sed0008552 Sechium edule HOM05D000581 ORTHO05D000412 4.6e-06 54.3 47 55.3
Glyma.06G088100 Glycine max HOM05D000581 ORTHO05D000412 6.0e-06 53.9 47 53.2
PGR102G0144 Punica granatum HOM05D000581 ORTHO05D000412 6.0e-06 53.9 46 54.3
RcHm_v2.0_Chr2g0091811 Rosa chinensis HOM05D000581 ORTHO05D000412 6.0e-06 53.9 46 56.5
Thecc.09G047700 Theobroma cacao HOM05D000581 ORTHO05D000412 6.0e-06 53.9 59 44.1
Cfa003649 Carpinus fangiana HOM05D000581 ORTHO05D000412 7.8e-06 53.5 47 53.2
Ciclev10027101m.g Citrus clementina HOM05D000581 ORTHO05D000412 7.8e-06 53.5 68 47.1
Haze_25820 Corylus avellana HOM05D000581 ORTHO05D000412 7.8e-06 53.5 47 51.1
Migut.A00186 Erythranthe guttata HOM05D000581 ORTHO05D000412 7.8e-06 53.5 54 46.3
QL12p041013 Quercus lobata HOM05D000581 ORTHO05D000412 7.8e-06 53.5 47 51.1
VMungo1309G1800 Vigna mungo HOM05D000581 ORTHO05D000412 7.8e-06 53.5 47 51.1


User provided reference genes

Program Settings