Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1053500 Malus domestica HOM05D000522 ORTHO05D004380 3.7e-93 344.7 158 100.0
MD02G1052100 Malus domestica HOM05D000522 ORTHO05D004380 8.5e-42 174.1 78 92.3
MD02G1055800 Malus domestica HOM05D000522 ORTHO05D004380 1.6e-24 116.7 145 51.0
MD02G1054100 Malus domestica HOM05D000522 ORTHO05D004380 2.3e-18 96.3 133 45.1
MD02G1053000 Malus domestica HOM05D000522 ORTHO05D004380 1.9e-17 93.2 127 48.0
MD15G1189500 Malus domestica HOM05D000522 ORTHO05D004380 2.0e-14 83.2 43 93.0
Prupe.7G227300 Prunus persica HOM05D000522 ORTHO05D004380 2.6e-14 82.8 43 93.0
Gohir.A07G003600 Gossypium hirsutum HOM05D000522 ORTHO05D004380 4.4e-14 82.0 43 90.7
Gohir.A13G196800 Gossypium hirsutum HOM05D000522 ORTHO05D004380 4.4e-14 82.0 43 90.7
Gohir.D07G004100 Gossypium hirsutum HOM05D000522 ORTHO05D004380 4.4e-14 82.0 43 90.7
Gohir.D13G202100 Gossypium hirsutum HOM05D000522 ORTHO05D004380 4.4e-14 82.0 43 90.7
Gorai.013G231000 Gossypium raimondii HOM05D000522 ORTHO05D004380 4.4e-14 82.0 43 90.7
Eucgr.C01076 Eucalyptus grandis HOM05D000522 ORTHO05D004380 5.8e-14 81.6 44 88.6
FvH4_1g05350 Fragaria vesca HOM05D000522 ORTHO05D004380 5.8e-14 81.6 43 90.7
FAN26G0510 Fragaria x ananassa HOM05D005850 ORTHO05D007405 5.8e-14 81.6 43 90.7
FAN26G3074 Fragaria x ananassa HOM05D005850 ORTHO05D007405 5.8e-14 81.6 43 90.7
Lalb_Chr16g0387971 Lupinus albus HOM05D000522 ORTHO05D004380 5.8e-14 81.6 43 88.4
RcHm_v2.0_Chr2g0091031 Rosa chinensis HOM05D000522 ORTHO05D004380 9.8e-14 80.9 43 90.7
VMungo0251G1337 Vigna mungo HOM05D000522 ORTHO05D004380 9.8e-14 80.9 43 88.4
Cpa.g.sc23.137 Carica papaya HOM05D000522 ORTHO05D004380 1.3e-13 80.5 44 88.6
QL02p086017 Quercus lobata HOM05D000522 ORTHO05D004380 1.7e-13 80.1 43 90.7
COL.COLO4_34881 Corchorus olitorius HOM05D000522 ORTHO05D004380 2.2e-13 79.7 43 86.0
Duzib150G0749 Durio zibethinus HOM05D000522 ORTHO05D004380 2.2e-13 79.7 43 88.4
Migut.K00465 Erythranthe guttata HOM05D000522 ORTHO05D004380 2.2e-13 79.7 44 88.6
Sc08g0007180 Simmondsia chinensis HOM05D000522 ORTHO05D004380 2.2e-13 79.7 43 86.0
Thecc.09G114500 Theobroma cacao HOM05D000522 ORTHO05D004380 2.9e-13 79.3 43 86.0
Glyma.05G232600 Glycine max HOM05D000522 ORTHO05D004380 3.7e-13 79.0 43 88.4
Glyma.08G040000 Glycine max HOM05D000522 ORTHO05D004380 3.7e-13 79.0 43 88.4
Gorai.001G003700 Gossypium raimondii HOM05D000522 ORTHO05D004380 3.7e-13 79.0 43 88.4
Lj7A644G12 Lonicera japonica HOM05D000522 ORTHO05D004380 3.7e-13 79.0 43 88.4
ECA234G1779 Erigeron canadensis HOM05D000522 ORTHO05D004380 4.9e-13 78.6 44 86.4
Ca_17345_v3 Cicer arietinum L. HOM05D000522 ORTHO05D004380 6.4e-13 78.2 43 88.4
Psat7g014120 Pisum sativum HOM05D000522 ORTHO05D004380 6.4e-13 78.2 43 88.4
Ciclev10008327m.g Citrus clementina HOM05D000522 ORTHO05D004380 8.3e-13 77.8 43 88.4
HanXRQChr10g0317741 Helianthus annuus HOM05D000522 ORTHO05D004380 8.3e-13 77.8 44 86.4
TPR.G21700 Trifolium pratense HOM05D000522 ORTHO05D004380 8.3e-13 77.8 43 88.4
CSS0032661 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D004380 1.1e-12 77.4 44 86.4
Lsat_1_v5_gn_5_100220 Lactuca sativa HOM05D000522 ORTHO05D004380 1.1e-12 77.4 44 86.4
Nitab4.5_0002363g0030 Nicotiana tabacum HOM05D000522 ORTHO05D004380 1.1e-12 77.4 44 86.4
Nitab4.5_0008529g0010 Nicotiana tabacum HOM05D000522 ORTHO05D004380 1.1e-12 77.4 44 86.4
Actinidia07420 Actinidia chinensis HOM05D000522 ORTHO05D004380 1.4e-12 77.0 44 86.4
Dinv41579 Davidia involucrata HOM05D000993 ORTHO05D004380 1.4e-12 77.0 44 86.4
Lj4g0021382 Lotus japonicus HOM05D000522 ORTHO05D004380 1.4e-12 77.0 43 86.0
Potri.006G156350 Populus trichocarpa HOM05D000522 ORTHO05D004380 1.4e-12 77.0 43 86.0
TAR383G0974 Trochodendron aralioides HOM05D000522 ORTHO05D004380 1.4e-12 77.0 44 86.4
AUR62011027 Chenopodium quinoa HOM05D000522 ORTHO05D004380 1.9e-12 76.6 43 83.7
AUR62033399 Chenopodium quinoa HOM05D000522 ORTHO05D004380 1.9e-12 76.6 43 83.7
ATR0037G022 Amborella trichopoda HOM05D000522 ORTHO05D004380 2.4e-12 76.3 44 84.1
Cfa003289 Carpinus fangiana HOM05D000522 ORTHO05D004380 2.4e-12 76.3 43 83.7
MELO3C004545.2 Cucumis melo HOM05D000522 ORTHO05D004380 3.2e-12 75.9 43 88.4
Rhsim03G0244700 Rhododendron simsii HOM05D000522 ORTHO05D004380 3.2e-12 75.9 44 84.1
SalBow1G3152 Salvia bowleyana HOM05D000522 ORTHO05D004380 3.2e-12 75.9 44 84.1
Actinidia20339 Actinidia chinensis HOM05D000522 ORTHO05D004380 4.1e-12 75.5 44 84.1
Ah.09g227710 Amaranthus hybridus HOM05D000522 ORTHO05D004380 4.1e-12 75.5 43 83.7
MBI04_g25412_MAGBIO Magnolia biondii HOM05D000522 ORTHO05D004380 4.1e-12 75.5 44 84.1
Duzib168G0832 Durio zibethinus HOM05D000522 ORTHO05D004380 5.4e-12 75.1 45 80.0
EL10Ac8g18536 Beta vulgaris HOM05D000522 ORTHO05D004380 7.1e-12 74.7 43 79.1
CSS0022610 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D004380 7.1e-12 74.7 44 81.8
Peaxi162Scf00560g00617 Petunia axillaris HOM05D000522 ORTHO05D004380 7.1e-12 74.7 44 81.8
TWI63G0481 Tripterygium wilfordii HOM05D000522 ORTHO05D004380 7.1e-12 74.7 43 83.7
MSTRG.26353 Avicennia marina HOM05D000522 ORTHO05D004380 1.2e-11 73.9 44 81.8
CAN.G32.1 Capsicum annuum HOM05D000522 ORTHO05D004380 1.2e-11 73.9 44 81.8
Os06g0594100 Oryza sativa ssp. japonica HOM05D000522 ORTHO05D004380 1.2e-11 73.9 44 81.8
THA.LOC104808747 Tarenaya hassleriana HOM05D000522 ORTHO05D004380 1.2e-11 73.9 43 81.4
Aa31LG9G4380 Aethionema arabicum HOM05D000522 ORTHO05D004380 1.6e-11 73.6 43 79.1
PSO063G3875 Papaver somniferum HOM05D000522 ORTHO05D004380 1.6e-11 73.6 44 81.8
PSO782G3947 Papaver somniferum HOM05D000522 ORTHO05D004380 1.6e-11 73.6 44 81.8
SGA_v2.0_scaffold183G39892 Striga asiatica HOM05D000522 ORTHO05D004380 1.6e-11 73.6 44 81.8
Sopen07g011860 Solanum pennellii HOM05D000522 ORTHO05D004380 2.1e-11 73.2 44 81.8
BcaB03g16093 Brassica carinata HOM05D000522 ORTHO05D004380 3.5e-11 72.4 43 79.1
Sed0015283 Sechium edule HOM05D000522 ORTHO05D004380 3.5e-11 72.4 43 81.4
AT4G13360 Arabidopsis thaliana HOM05D000522 ORTHO05D004380 6.0e-11 71.6 43 79.1
AL9U10300 Arabidopsis lyrata HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
BcaC02g09431 Brassica carinata HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
BcaC04g22501 Brassica carinata HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
A01p12550 Brassica napus HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
A03p21310 Brassica napus HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
A04p08740 Brassica napus HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
C04p42550 Brassica napus HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
BolC4t25830H Brassica oleracea HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
BraA03t11074Z Brassica rapa HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
BraA03t11366Z Brassica rapa HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
BraA04t16571Z Brassica rapa HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
Carub.0007s2921 Capsella rubella HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
CARHR218930 Cardamine hirsuta HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
CDE02G2108 Ceratophyllum demersum HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 81.4
Sp7g10940 Schrenkiella parvula HOM05D000522 ORTHO05D004380 7.8e-11 71.2 43 79.1
Aqoxy7G01827 Aquilegia oxysepala HOM05D000522 ORTHO05D004380 1.0e-10 70.9 43 81.4
Solyc07g022880.3 Solanum lycopersicum HOM05D000522 ORTHO05D004380 1.3e-10 70.5 44 79.5
BcaB03g14587 Brassica carinata HOM05D000522 ORTHO05D004380 3.9e-10 68.9 43 76.7
Nn2g11819 Nelumbo nucifera HOM05D000522 ORTHO05D004380 3.9e-10 68.9 44 79.5
Thhalv10002535m.g Eutrema salsugineum HOM05D000522 ORTHO05D004380 5.1e-10 68.6 43 74.4
Thhalv10025298m.g Eutrema salsugineum HOM05D000522 ORTHO05D004380 5.1e-10 68.6 43 76.7
Hund09185 Selenicereus undatus HOM05D000522 ORTHO05D004380 5.1e-10 68.6 43 74.4
Aa31LG8G11100 Aethionema arabicum HOM05D000522 ORTHO05D004380 6.6e-10 68.2 43 76.7
AL3G39830 Arabidopsis lyrata HOM05D000522 ORTHO05D004380 6.6e-10 68.2 43 79.1
AT3G24360 Arabidopsis thaliana HOM05D000522 ORTHO05D004380 1.5e-09 67.0 43 76.7
BcaC01g03316 Brassica carinata HOM05D000522 ORTHO05D004380 1.5e-09 67.0 43 74.4
C03p53740 Brassica napus HOM05D000522 ORTHO05D004380 1.5e-09 67.0 43 74.4
BolC3t17634H Brassica oleracea HOM05D000522 ORTHO05D004380 1.5e-09 67.0 43 74.4
ClCG11G002610 Citrullus lanatus HOM05D000522 ORTHO05D004380 1.5e-09 67.0 55 69.1
BraA03t13500Z Brassica rapa HOM05D000522 ORTHO05D004380 1.9e-09 66.6 43 74.4
A03p43630 Brassica napus HOM05D000522 ORTHO05D004380 2.5e-09 66.2 43 74.4
GSVIVG01015428001 Vitis vinifera HOM05D000522 ORTHO05D004380 5.6e-09 65.1 70 55.7
arahy.Tifrunner.gnm1.ann1.E6IMKI Arachis hypogaea HOM05D000522 ORTHO05D004380 9.5e-09 64.3 64 57.8
Haze_25684 Corylus avellana HOM05D000522 ORTHO05D004380 3.6e-08 62.4 72 51.4
Oeu058085.3 Olea europaea HOM05D000522 ORTHO05D004380 6.2e-08 61.6 74 51.4
arahy.Tifrunner.gnm1.ann1.R702JB Arachis hypogaea HOM05D000522 ORTHO05D004380 8.1e-08 61.2 72 51.4
Cc06_g09360 Coffea canephora HOM05D000522 ORTHO05D004380 1.4e-07 60.5 70 52.9
HPP92_006445 Vanilla planifolia HOM05D000522 ORTHO05D004380 1.4e-07 60.5 44 70.5
CANSAT56G3220 Cannabis sativa HOM05D000522 ORTHO05D004380 2.0e-06 56.6 54 57.4
CANSAT56G3667 Cannabis sativa HOM05D000522 ORTHO05D004380 2.0e-06 56.6 54 57.4
PGR102G1361 Punica granatum HOM05D000522 ORTHO05D004380 2.0e-06 56.6 54 59.3
AagrBONN_evm.TU.Sc2ySwM_340.302 Anthoceros agrestis HOM05D000522 ORTHO05D004380 5.8e-06 55.1 44 59.1


User provided reference genes

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