Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1049300 Malus domestica HOM05D007617 ORTHO05D007195 6.0e-112 407.5 205 100.0
MD14G1167200 Malus domestica HOM05D007617 ORTHO05D007195 2.7e-56 222.6 123 91.9
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 6.3e-53 211.5 136 79.4
Prupe.5G161500 Prunus persica HOM05D007617 ORTHO05D007195 3.2e-41 172.6 135 66.7
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 1.5e-25 120.6 133 55.6
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 4.4e-22 109.0 133 51.9
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 7.5e-22 108.2 133 51.9
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 9.8e-22 107.8 133 52.6
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.3e-21 107.5 133 51.9
Haze_07632 Corylus avellana HOM05D007617 ORTHO05D007195 8.3e-21 104.8 141 48.9
FAN04G0785 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.8e-20 103.6 134 52.2
QL10p005918 Quercus lobata HOM05D007617 ORTHO05D007195 1.8e-20 103.6 137 46.7
Atru.chr9.1807 Acer truncatum HOM05D007617 ORTHO05D007195 1.9e-17 93.6 137 43.1
CANSAT80G0013 Cannabis sativa HOM05D007617 ORTHO05D007195 5.5e-17 92.0 134 44.8
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 1.2e-16 90.9 136 44.1
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 4.0e-15 85.9 134 46.3
Thecc.03G118700 Theobroma cacao HOM05D011792 ORTHO05D007195 6.8e-15 85.1 143 43.4
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 2.6e-14 83.2 139 44.6
CiPaw.11G014400 Carya illinoinensis HOM05D007617 ORTHO05D007195 5.7e-14 82.0 140 45.0
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 9.8e-14 81.3 138 42.0
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 1.7e-13 80.5 137 42.3
Manes.14G057300 Manihot esculenta HOM05D007617 ORTHO05D007195 6.3e-13 78.6 143 42.7
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 8.3e-13 78.2 136 41.9
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 2.4e-12 76.6 139 44.6
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 4.1e-12 75.9 139 42.4
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 1.2e-11 74.3 139 43.2
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 1.2e-11 74.3 140 42.1
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.3e-10 70.9 136 44.1
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.3e-10 70.9 136 44.1
Duzib205G1108 Durio zibethinus HOM05D011792 ORTHO05D007195 1.3e-10 70.9 144 38.9
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 1.3e-10 70.9 144 40.3
TAR371G0337 Trochodendron aralioides HOM05D007617 ORTHO05D007195 2.9e-10 69.7 135 37.8
Gohir.A07G055100 Gossypium hirsutum HOM05D011792 ORTHO05D007195 6.6e-10 68.6 141 41.1
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 1.1e-09 67.8 132 41.7
Gorai.001G062900 Gossypium raimondii HOM05D011792 ORTHO05D007195 2.5e-09 66.6 148 40.5
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 4.3e-09 65.9 137 45.3
TAR622G0315 Trochodendron aralioides HOM05D007617 ORTHO05D007195 4.3e-09 65.9 136 36.8
Gohir.D07G059400 Gossypium hirsutum HOM05D011792 ORTHO05D007195 5.6e-09 65.5 148 39.9
ClCG05G013140 Citrullus lanatus HOM05D007617 ORTHO05D007195 2.1e-08 63.5 128 39.1
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 2.1e-08 63.5 138 41.3
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 2.1e-08 63.5 137 38.7
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 2.1e-08 63.5 139 42.4
Carub.0008s2391 Capsella rubella HOM05D010525 ORTHO05D007195 4.7e-08 62.4 139 36.0
MSTRG.549 Avicennia marina HOM05D007617 ORTHO05D007195 6.1e-08 62.0 144 35.4
Nn3g16639 Nelumbo nucifera HOM05D007617 ORTHO05D007195 8.0e-08 61.6 136 39.0
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 1.0e-07 61.2 133 39.8
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 1.0e-07 61.2 140 42.9
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 1.4e-07 60.8 140 40.0
AL8G40240 Arabidopsis lyrata HOM05D010525 ORTHO05D007195 1.8e-07 60.5 142 36.6
Gohir.D12G189700 Gossypium hirsutum HOM05D011792 ORTHO05D007195 1.8e-07 60.5 146 36.3
Aa31LG1G18820 Aethionema arabicum HOM05D010525 ORTHO05D007195 2.3e-07 60.1 143 37.1
TPR.G31739 Trifolium pratense HOM05D007617 ORTHO05D007195 2.3e-07 60.1 138 36.2
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 4.0e-07 59.3 85 49.4
Medtr1g093790 Medicago truncatula HOM05D007617 ORTHO05D007195 5.2e-07 58.9 138 37.0
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 6.8e-07 58.5 100 45.0
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 6.8e-07 58.5 139 38.8
PGR142G0897 Punica granatum HOM05D007617 ORTHO05D007195 6.8e-07 58.5 137 41.6
CARHR276990 Cardamine hirsuta HOM05D010525 ORTHO05D007195 8.9e-07 58.2 134 38.8
TWI39G0914 Tripterygium wilfordii HOM05D007617 ORTHO05D007195 8.9e-07 58.2 142 37.3
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 1.2e-06 57.8 134 37.3
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 2.0e-06 57.0 128 37.5
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 2.0e-06 57.0 131 36.6
Thhalv10010898m.g Eutrema salsugineum HOM05D010525 ORTHO05D007195 2.6e-06 56.6 141 37.6
Nitab4.5_0014774g0010 Nicotiana tabacum HOM05D007617 ORTHO05D007195 2.6e-06 56.6 60 60.0
Cc07_g00130 Coffea canephora HOM05D007617 ORTHO05D007195 4.4e-06 55.8 75 50.7
Sp5g13710 Schrenkiella parvula HOM05D010525 ORTHO05D007195 5.7e-06 55.5 138 37.0
Nn4g22527 Nelumbo nucifera HOM05D007617 ORTHO05D007195 7.5e-06 55.1 140 35.7
PGSC0003DMG400006919 Solanum tuberosum HOM05D007617 ORTHO05D007195 7.5e-06 55.1 137 41.6
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 9.8e-06 54.7 147 33.3
Dinv33408 Davidia involucrata HOM05D007617 ORTHO05D007195 9.8e-06 54.7 146 34.9
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 9.8e-06 54.7 143 38.5


User provided reference genes

Program Settings