Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1042100 Malus domestica HOM05D002531 ORTHO05D249245 1.7e-25 118.6 62 100.0
MD08G1202800 Malus domestica HOM05D002531 ORTHO05D003018 4.0e-11 70.9 40 90.0
Prupe.1G535300 Prunus persica HOM05D002531 ORTHO05D003018 3.2e-08 61.2 39 79.5
Haze_22484 Corylus avellana HOM05D002531 ORTHO05D003018 9.2e-08 59.7 39 71.8
FvH4_5g34370 Fragaria vesca HOM05D002531 ORTHO05D003018 1.6e-07 58.9 39 74.4
FAN18G2880 Fragaria x ananassa HOM05D002531 ORTHO05D003018 1.6e-07 58.9 39 74.4
CiPaw.07G163400 Carya illinoinensis HOM05D002531 ORTHO05D003018 2.1e-07 58.5 39 69.2
RcHm_v2.0_Chr7g0234941 Rosa chinensis HOM05D002531 ORTHO05D003018 6.0e-07 57.0 39 69.2
CAN.G193.5 Capsicum annuum HOM05D002531 ORTHO05D003018 1.0e-06 56.2 39 66.7
PGSC0003DMG400009333 Solanum tuberosum HOM05D002531 ORTHO05D003018 1.0e-06 56.2 39 66.7
Peaxi162Scf01112g00134 Petunia axillaris HOM05D002531 ORTHO05D003018 1.3e-06 55.8 39 66.7
TAR628G0620 Trochodendron aralioides HOM05D002531 ORTHO05D003018 1.3e-06 55.8 39 66.7
PGR031G3127 Punica granatum HOM05D002531 ORTHO05D003018 1.7e-06 55.5 39 66.7
Atru.chr13.986 Acer truncatum HOM05D002531 ORTHO05D003018 2.3e-06 55.1 39 69.2
Eucgr.F02159 Eucalyptus grandis HOM05D002531 ORTHO05D003018 2.3e-06 55.1 39 66.7
Manes.18G056700 Manihot esculenta HOM05D002531 ORTHO05D003018 2.3e-06 55.1 43 65.1
Solyc04g076570.4 Solanum lycopersicum HOM05D002531 ORTHO05D003018 2.3e-06 55.1 39 64.1
Sopen04g030290 Solanum pennellii HOM05D002531 ORTHO05D003018 2.3e-06 55.1 39 64.1
Nitab4.5_0000131g0030 Nicotiana tabacum HOM05D002531 ORTHO05D003018 3.9e-06 54.3 39 64.1
Cc10_g08530 Coffea canephora HOM05D002531 ORTHO05D003018 5.1e-06 53.9 38 65.8
COL.COLO4_35272 Corchorus olitorius HOM05D002531 ORTHO05D003018 5.1e-06 53.9 39 64.1
Gohir.A05G218600 Gossypium hirsutum HOM05D002531 ORTHO05D003018 8.6e-06 53.1 39 66.7
Gohir.D05G221300 Gossypium hirsutum HOM05D002531 ORTHO05D003018 8.6e-06 53.1 39 66.7
Gorai.009G228500 Gossypium raimondii HOM05D002531 ORTHO05D003018 8.6e-06 53.1 39 66.7
Lsat_1_v5_gn_9_76941 Lactuca sativa HOM05D002531 ORTHO05D003018 8.6e-06 53.1 40 60.0
Medtr3g099780 Medicago truncatula HOM05D002531 ORTHO05D003018 8.6e-06 53.1 39 64.1
Os12g0511300 Oryza sativa ssp. japonica HOM05D002531 ORTHO05D003018 8.6e-06 53.1 39 64.1
PSO675G8490 Papaver somniferum HOM05D002531 ORTHO05D003018 8.6e-06 53.1 39 64.1


User provided reference genes

Program Settings