Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 3.7e-57 224.6 106 100.0
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 9.1e-48 193.4 106 82.1
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 9.1e-48 193.4 106 82.1
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 1.2e-47 193.0 106 80.2
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 1.6e-47 192.6 106 83.0
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 2.0e-47 192.2 106 81.1
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 2.0e-47 192.2 106 81.1
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 7.7e-47 190.3 106 80.2
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 1.6e-44 182.6 106 73.6
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 3.6e-44 181.4 105 75.2
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 4.0e-43 177.9 106 74.5
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 1.5e-42 176.0 106 71.7
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 1.5e-42 176.0 106 72.6
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 2.0e-42 175.6 106 71.7
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 3.4e-42 174.9 106 73.6
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 5.7e-42 174.1 106 71.7
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 5.7e-42 174.1 106 69.8
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 7.5e-42 173.7 106 71.7
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 1.3e-41 172.9 106 69.8
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 2.2e-41 172.2 101 76.2
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 2.8e-41 171.8 106 69.8
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 2.8e-41 171.8 104 73.1
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.8e-41 171.8 104 71.2
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 4.9e-41 171.0 106 71.7
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 6.3e-41 170.6 102 73.5
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 8.3e-41 170.2 102 72.5
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 1.1e-40 169.9 101 73.3
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 1.1e-40 169.9 101 73.3
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.1e-40 169.9 106 70.8
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 2.4e-40 168.7 104 68.3
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 2.4e-40 168.7 104 71.2
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 1.6e-39 166.0 94 78.7
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.6e-39 166.0 106 70.8
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 3.5e-39 164.9 105 69.5
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 4.5e-39 164.5 104 71.2
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 7.8e-39 163.7 94 77.7
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 2.3e-38 162.2 96 72.9
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 3.8e-38 161.4 106 68.9
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 6.6e-38 160.6 92 77.2
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 6.6e-38 160.6 102 70.6
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 8.6e-38 160.2 104 65.4
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 1.1e-37 159.8 102 65.7
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 1.9e-37 159.1 102 65.7
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 2.5e-37 158.7 92 77.2
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 4.3e-37 157.9 104 68.3
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 5.6e-37 157.5 99 67.7
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 5.6e-37 157.5 99 67.7
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 9.5e-37 156.8 99 66.7
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 9.5e-37 156.8 102 67.6
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 1.2e-36 156.4 96 68.8
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 2.8e-36 155.2 99 65.7
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 3.6e-36 154.8 104 64.4
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 6.1e-36 154.1 99 65.7
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 8.0e-36 153.7 101 66.3
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 2.3e-35 152.1 101 64.4
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 4.0e-35 151.4 98 66.3
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 5.2e-35 151.0 100 64.0
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 5.2e-35 151.0 99 63.6
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 8.9e-35 150.2 99 63.6
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 2.6e-34 148.7 104 59.6
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 3.4e-34 148.3 99 63.6
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 3.4e-34 148.3 101 62.4
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 4.4e-34 147.9 90 70.0
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 7.5e-34 147.1 106 58.5
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 7.5e-34 147.1 101 68.3
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 7.5e-34 147.1 101 68.3
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 9.8e-34 146.7 84 75.0
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 1.3e-33 146.4 123 58.5
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 1.7e-33 146.0 91 69.2
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 2.2e-33 145.6 102 60.8
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 4.9e-33 144.4 102 60.8
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 2.4e-32 142.1 98 62.2
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 4.1e-32 141.4 91 69.2
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 2.0e-31 139.0 99 60.6
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 2.0e-31 139.0 99 60.6
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 3.5e-31 138.3 98 62.2
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 3.5e-31 138.3 98 62.2
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 5.0e-30 134.4 99 55.6
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 1.1e-29 133.3 93 63.4
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 5.6e-29 131.0 103 57.3
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 7.3e-29 130.6 84 65.5
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 7.3e-29 130.6 99 55.6
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 9.5e-29 130.2 63 77.8
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 2.1e-28 129.0 99 56.6
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 3.6e-28 128.3 103 56.3
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 4.7e-28 127.9 103 53.4
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 2.3e-27 125.6 103 55.3
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 2.3e-27 125.6 103 54.4
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 2.0e-26 122.5 103 53.4
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 9.8e-26 120.2 91 58.2
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.3e-25 119.8 75 64.0
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 2.9e-25 118.6 78 66.7
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 1.9e-24 115.9 94 51.1
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 3.2e-24 115.2 99 46.5
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 5.4e-24 114.4 101 52.5
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 7.0e-24 114.0 98 53.1
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 9.2e-24 113.6 101 51.5
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 1.2e-23 113.2 100 52.0
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 3.5e-23 111.7 92 57.6
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 1.7e-22 109.4 98 50.0
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 8.6e-22 107.1 57 70.2
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 8.6e-22 107.1 101 46.5
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 1.1e-21 106.7 91 52.7
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.9e-21 105.9 61 73.8
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 1.6e-20 102.8 107 44.9
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 2.6e-18 95.5 113 44.2
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 2.2e-17 92.4 108 40.7
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 1.1e-16 90.1 49 77.6
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 8.1e-12 73.9 100 37.0
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 5.8e-10 67.8 98 35.7
QL03p062338 Quercus lobata HOM05D007077 ORTHO05D008853 7.6e-10 67.4 59 61.0


User provided reference genes

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