Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 4.6e-109 397.9 198 100.0
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 8.9e-97 357.1 198 90.4
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 9.2e-94 347.1 199 87.4
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 3.3e-83 312.0 199 79.9
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 2.2e-79 299.3 199 75.9
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.2e-79 299.3 199 75.9
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 6.4e-79 297.7 199 75.4
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 8.4e-79 297.4 199 75.4
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 1.9e-75 286.2 187 75.9
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 2.1e-74 282.7 202 71.8
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 1.4e-73 280.0 187 73.8
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 3.4e-72 275.4 187 72.7
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 4.5e-72 275.0 187 72.2
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 9.9e-72 273.9 196 71.4
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 4.9e-71 271.6 187 68.4
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 1.1e-70 270.4 193 71.0
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 1.1e-70 270.4 193 71.0
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 1.9e-70 269.6 187 71.7
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 2.4e-70 269.2 188 71.8
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 2.4e-70 269.2 187 71.1
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 3.2e-70 268.9 187 69.5
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.2e-69 266.9 187 70.1
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 1.6e-69 266.5 188 71.3
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 1.3e-68 263.5 196 68.4
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 5.1e-68 261.5 188 69.7
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 6.7e-68 261.2 187 67.4
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 6.7e-68 261.2 187 67.4
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.1e-67 260.4 187 67.4
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.1e-67 260.4 188 67.6
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.5e-67 260.0 187 67.4
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 1.9e-67 259.6 189 68.3
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 1.3e-66 256.9 188 69.7
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 1.3e-66 256.9 250 56.0
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 3.7e-66 255.4 187 65.2
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 3.7e-66 255.4 187 66.3
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 3.7e-66 255.4 189 66.7
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 3.7e-66 255.4 188 67.6
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 4.8e-66 255.0 197 69.0
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 8.1e-66 254.2 191 67.5
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.4e-65 253.4 187 64.7
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 1.5e-64 250.0 188 66.5
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 2.0e-64 249.6 188 65.4
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.0e-64 249.6 221 58.4
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 2.6e-64 249.2 197 67.5
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 3.4e-64 248.8 188 66.5
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 4.5e-64 248.4 188 67.0
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 4.5e-64 248.4 197 67.5
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 5.8e-64 248.1 188 66.5
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 5.8e-64 248.1 188 64.9
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 1.0e-63 247.3 185 67.0
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.3e-63 246.9 188 66.5
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 1.7e-63 246.5 188 64.4
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 2.2e-63 246.1 182 68.7
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 3.8e-63 245.4 188 64.4
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 3.8e-63 245.4 188 64.4
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 3.8e-63 245.4 188 64.9
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 4.9e-63 245.0 188 66.0
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 4.9e-63 245.0 190 64.2
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 8.4e-63 244.2 188 63.3
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 8.4e-63 244.2 187 63.6
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 2.5e-62 242.7 189 63.5
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 3.2e-62 242.3 188 61.7
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 7.1e-62 241.1 184 64.7
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 9.3e-62 240.7 188 66.5
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 3.5e-61 238.8 188 62.2
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 3.9e-60 235.3 199 63.8
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 8.7e-60 234.2 184 62.0
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 8.7e-60 234.2 194 61.9
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 8.7e-60 234.2 190 63.7
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.1e-59 233.8 188 64.4
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.1e-59 233.8 188 64.4
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.5e-59 232.6 190 63.2
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 3.3e-59 232.3 184 62.5
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 4.3e-59 231.9 190 63.2
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 5.7e-59 231.5 188 62.2
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 5.7e-59 231.5 199 64.3
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 9.6e-59 230.7 189 61.4
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 9.6e-59 230.7 189 64.0
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.6e-58 229.9 188 62.2
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.6e-58 229.9 174 64.9
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 3.7e-58 228.8 188 62.2
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 4.8e-58 228.4 188 61.7
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.8e-57 226.5 188 61.7
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 2.4e-57 226.1 187 60.4
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 6.9e-57 224.6 189 60.3
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.5e-56 223.4 191 60.2
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.5e-56 223.4 182 64.3
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 7.6e-56 221.1 188 61.2
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 1.3e-55 220.3 158 66.5
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 6.5e-55 218.0 140 75.0
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 1.4e-54 216.9 146 72.6
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 2.1e-53 213.0 151 67.5
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 1.8e-52 209.9 191 60.2
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.1e-51 207.2 141 70.2
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 4.8e-50 201.8 150 65.3
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 1.5e-48 196.8 160 60.6
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 2.0e-48 196.4 187 53.5
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 1.3e-47 193.7 152 64.5
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 2.0e-43 179.9 143 62.2
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 1.7e-39 166.8 133 58.6
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 6.5e-39 164.9 192 53.1
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 2.5e-38 162.9 187 48.7
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 4.7e-37 158.7 179 48.0
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.8e-33 146.7 102 70.6
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 1.6e-29 133.7 191 44.5
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 3.0e-28 129.4 96 64.6
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 8.8e-28 127.9 120 50.8
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 1.7e-26 123.6 161 40.4
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 3.7e-26 122.5 86 66.3
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 3.1e-25 119.4 95 62.1
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 2.7e-21 106.3 165 35.2
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 1.8e-20 103.6 89 62.9
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 4.0e-20 102.4 121 40.5
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 2.6e-19 99.8 86 59.3
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.7e-16 89.7 65 67.7
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 2.5e-14 83.2 75 58.7
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 2.3e-12 76.6 99 45.5
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 4.0e-12 75.9 47 78.7
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.2e-11 74.3 125 34.4
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 1.2e-08 64.3 51 60.8
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 6.6e-07 58.5 48 66.7


User provided reference genes

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